Identifiers and Description

Gene Model Identifier

TTHERM_00561440

Standard Name

LC2B

Aliases

PreTt27905 | 74.m00182 | 3720.m00072 | Tctex2B

Description

LC2B dynein light chain tctex-type 1 protein; Light chain subunit of ciliary two-headed inner arm dynein (IAD) complex 1

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• axonemal dynein complex (ISS) | GO:0005858 | Ref:16933976
• inner dynein arm (ISS) | GO:0036156 | Ref:16933976
• microtubule associated complex (ISS) | GO:0005875 | Ref:16933976

Molecular Function

• microtubule motor activity (ISS) | GO:0003777 | Ref:16933976

Biological Process

• cilium movement (ISS) | GO:0003341 | Ref:16933976
• microtubule-based process (ISS) | GO:0007017 | Ref:16933976
• microtubule-based movement (ISS) | GO:0007018 | Ref:16933976

Domains

• ( PF03645 ) Tctex-1 family

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.2%

TetraMine Data

TTHERM_00561440

WebApollo

Fullscreen View

Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_16138.1	1.9991716194688635e-85	tctex-1 family protein (129 aa )
Oxytricha	Contig10748.0.g6	4.001416569413617e-37	Tctex-1 family
WormBase	WBGene00017014	1.9999391735788327e-19	locus:dylt-2 status:Partiall y_confirmed UniProt:Q18917 protein_id:CCD64418.1
Stentor Coeruleus	SteCoe_14097	0.00000000000003442477108469977
DictyBase	DDB_G0284589	0.000000000500206551404915	dlcA on chromosome: 4 position 2178851 to 2179736

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00561440(coding)
ATGAAAAGAGGATAAGGAGGCACTACTAACTAGGAATATTAAATCCGCCCTAAATAAAGA
GAAAAATTTAGACCAGGCAAAGCAAAAGAAATAATTAGTGAAACATTAAATTTAAAATTA
AAAAACTAAGTATACACTGATGCAGCTACTGTGTCTACAATCTCTAGAGATATTGCTGAC
ACCATTAAATACAAATTAAAAGATTTAGGATTACCAAGATATAAGTTTATGGTATCAGTT
ATTATTGGATAATAAAAAGGTTAAGGTGTAAGAGTCGGATCTCGTTAATTTTGGGATTTC
GATACTGATTATGTAGCTAGTGATTATTATGTCAATGACTCACTATTTTGTCTTGTAACT
GTTTACGGCGTTTATCTTTACTGA

>TTHERM_00561440(protein)
MKRGQGGTTNQEYQIRPKQREKFRPGKAKEIISETLNLKLKNQVYTDAATVSTISRDIAD
TIKYKLKDLGLPRYKFMVSVIIGQQKGQGVRVGSRQFWDFDTDYVASDYYVNDSLFCLVT
VYGVYLY

>TTHERM_00561440(gene)
ATGAAAAGAGGATAAGGAGGCACTACTAACTAGGAATATTAAATCCGCCCTAAATAAAGA
GAAAAATTTAGACCAGGCAAAGCAAAAGAAATAATTAGTGAAACATTAAATTTAAAATTA
AAAAACTAAGTATACACTGATGCAGCTACTGTGTCTACAATCTCTAGAGATATTGCTGAC
ACCATTAAATACAAATTAAAAGATTTAGGATTACCAAGATATAAGTTTATGGTATCAGTT
ATTATTGGATAATAAAAAGGTTAAGGTGTAAGAGTCGGATCTCGTTAATTTTGGGATTTC
GATACTGATTATGTAGCTAGTGATTATTATGTCAATGACTCACTATTTTGTCTTGTAACT
GTTTACGGCGTTTATCTTTACTGA