Identifiers and Description

Gene Model Identifier

TTHERM_00334290

Standard Name

LC1

Aliases

PreTt05974 | 34.m00211 | 3689.m00009

Description

LC1 dynein light chain 1 axonemal protein; Light chain subunit of ciliary three-headed outer arm dynein (OAD)

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• outer dynein arm (ISS) | GO:0036157 | Ref:16933976
• microtubule associated complex (ISS) | GO:0005875 | Ref:16933976
• axonemal dynein complex (ISS) | GO:0005858 | Ref:16933976

Molecular Function

• microtubule motor activity (ISS) | GO:0003777 | Ref:16933976

Biological Process

• microtubule-based movement (ISS) | GO:0007018 | Ref:16933976
• microtubule-based process (ISS) | GO:0007017 | Ref:16933976
• cilium movement (ISS) | GO:0003341 | Ref:16933976

Domains

• ( PF00560 ) Leucine Rich Repeat

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 11.7%

TetraMine Data

TTHERM_00334290

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_16020.1	2.0000211193600847e-137	leucine rich repeat family pro tein (203 aa)
Oxytricha	Contig476.1.g56	8.001993295941272e-61	Leucine Rich repeats (2 copies )
Stentor Coeruleus	SteCoe_30953	3.221340285992516e-27
DictyBase	DDB_G0284039	0.000000009996807949091551	pprA on chromosome: 4 position 1595576 to 1596770
WormBase	WBGene00189952	0.0000000400154582995175	status:Partially_confirmed U niProt:C4ALD3 protein_id:CCD 72863.1
SGD	YKL193C	0.0000009995106777214876	SDS22 Conserved nuclear regula tory subunit of Glc7p type 1 p rotein serine-threonine phosph atase (PP1), functions positiv ely with Glc7p to promote deph osphorylation of nuclear subst rates required for chromosome transmission during mitosis

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00334290(coding)
ATGTCAAAAGGTACAACCTGTCAAAAGGCTATCGTCAACTGGGAAGCTGCTAATCCTGGT
AAAAATCCTTCTGAAGCAGAAGAAATCAAGCTAATTTTCTAAATTCCTCCTATTGAAAAG
ATGGACGGTCCCGTTTTAAACACTCTTACTAAATGCAAAAAGCTATCTTTATCTTCAAAC
TCTATCGATAAAATGATCTCTTTGAATATGCTCCGAAATTTAGAAATTTTGTCTCTGTCT
CGTAATGTCATCAAAAAGATTAGTGGTTTAGAAGATATAGGAGGAACATTAAGGCAGTTA
TGGTTAAGTTATAATTTCATTGAAAAGTTAGATGGTTTAAATAATTGCAGTGTCCTCCAG
ACCTTATATATTGGAAATAATAGAATCAAAAATTGGGAAGAATTGGATAAGCTAAAAGAT
CTTCCTGAATTAGAAAATGTGCTTTTTTATGGTAACCCAATATATGAATAAGTAAAAGAA
GATCCAAAGTTAATCGTCTTGAAAAAGTTGCCTACCTTAAAAAATGTTGATGGCTACATT
ATTGATGATTCTGTTCTCGAAAAGGTTAAATAAATTGCAGATATCCCTATTTCAGCTAAA
TAACTTTGA

>TTHERM_00334290(protein)
MSKGTTCQKAIVNWEAANPGKNPSEAEEIKLIFQIPPIEKMDGPVLNTLTKCKKLSLSSN
SIDKMISLNMLRNLEILSLSRNVIKKISGLEDIGGTLRQLWLSYNFIEKLDGLNNCSVLQ
TLYIGNNRIKNWEELDKLKDLPELENVLFYGNPIYEQVKEDPKLIVLKKLPTLKNVDGYI
IDDSVLEKVKQIADIPISAKQL

>TTHERM_00334290(gene)
ATGTCAAAAGGTACAACCTGTCAAAAGGCTATCGTCAACTGGGAAGCTGCTAATCCTGGT
AAAAATCCTTCTGAAGCAGAAGAAATCAAGCTAATTTTCTAAATTCCTCCTATTGAAAAG
ATGGACGGTCCCGTTTTAAACACTCTTACTAAATGCAAAAAGCTATCTTTATCTTCAAAC
TCTATCGATAAAATGATCTCTTTGAATATGCTCCGAAATTTAGAAATTTTGTCTCTGTCT
CGTAATGTCATCAAAAAGATTAGTGGTTTAGAAGATATAGGAGGAACATTAAGGCAGTTA
TGGTTAAGTTATAATTTCATTGAAAAGTTAGATGGTTTAAATAATTGCAGTGTCCTCCAG
ACCTTATATATTGGAAATAATAGAATCAAAAATTGGGAAGAATTGGATAAGCTAAAAGAT
CTTCCTGAATTAGAAAATGTGCTTTTTTATGGTAACCCAATATATGAATAAGTAAAAGAA
GATCCAAAGTTAATCGTCTTGAAAAAGTTGCCTACCTTAAAAAATGTTGATGGCTACATT
ATTGATGATTCTGTTCTCGAAAAGGTTAAATAAATTGCAGATATCCCTATTTCAGCTAAA
TAACTTTGA