Identifiers and Description

Gene Model Identifier

TTHERM_00456900

Standard Name

KHD5 (KH domain-containing protein 5)

Aliases

PreTt20320 | 53.m00222 | 3712.m00082

Description

KHD5 Pre-rRNA-processing protein pno1

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00013 ) KH domain

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.5%

TetraMine Data

TTHERM_00456900

WebApollo

Fullscreen View

Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_13784.1	7.00307292561241e-151	hypothetical protein (233 aa)
Oxytricha	Contig17338.0.g95	4.001839059848271e-97	KH domain
SGD	YOR145C	6.002330506118426e-84	PNO1 Essential nucleolar prote in required for pre-18S rRNA p rocessing, interacts with Dim1 p, an 18S rRNA dimethyltransfe rase, and also with Nob1p, whi ch is involved in proteasome b iogenesis; contains a KH domai n
DictyBase	DDB_G0287557	1.9996609186508915e-82	pno1 on chromosome: 5 position 417964 to 419093
WormBase	WBGene00013144	1.999618694399617e-70	RNA-binding protein pno-1 st atus:Confirmed UniProt:O1821 6 protein_id:CAB16491.1
Stentor Coeruleus	SteCoe_19483	1.6458114310822737e-38

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00456900(coding)
ATGGATAACCAAGAAGAAGTTCAATTCGATTAAAACGAAGAAATAGATCAAGAATTCGAT
AAGATAGATGAATAAGATATCGTATTAGAAAAGATTGATGAGTTCGCTAAAGATATTGAT
TTTGAAAAACCTGAAGAAGCAGCTAAAAAGAGTGAAATGAGAAGAATTCCAGTACCTCCT
CACAGATTAACTCCATTAAGATAAAGTTGGGAAAAGATTGTTACTACTGTTGTAGAAAAT
ATGAAATTATAAATCAGAATGAACACCAAAAAGAAAGCTGTTGAAATTAAATCATCAGAA
CACACACCTGAAACCTCTGCCGTACAAAAGACTGCTGATTTCTTAAAGGCTTTCATGCTT
GGTTTCGAATTAAATGATGCTATTGCTTTACTAAGATTAGATGATTTATATATTGAATCT
TTTGAAGTTAAGGATGTTAAAAATTTAAGTGGTGATAACTTGTCTCGTGCCATTGGTAGA
ATTACTGGTGAAAAAGGTAAAACTAAGTTTGCTATAGAGAATGCATCAAGAACAAGAATC
GTAGTTGCTGATAAAAAGATTCACATATTAGGTTCATTCAGTAATATAAAATGCGCTAGA
GAAGCTATCTGCTCCTTGATTATGGGTAGCCCACCTGGTAAAGTTTACTCTCAACTTAAA
TTCATTGCTAAAAGATACTTAGAAAAGTTTTGA

>TTHERM_00456900(protein)
MDNQEEVQFDQNEEIDQEFDKIDEQDIVLEKIDEFAKDIDFEKPEEAAKKSEMRRIPVPP
HRLTPLRQSWEKIVTTVVENMKLQIRMNTKKKAVEIKSSEHTPETSAVQKTADFLKAFML
GFELNDAIALLRLDDLYIESFEVKDVKNLSGDNLSRAIGRITGEKGKTKFAIENASRTRI
VVADKKIHILGSFSNIKCAREAICSLIMGSPPGKVYSQLKFIAKRYLEKF

>TTHERM_00456900(gene)
ATGGATAACCAAGAAGAAGTTCAATTCGATTAAAACGAAGAAATAGATCAAGAATTCGAT
AAGATAGATGAATAAGATATCGTATTAGAAAAGATTGATGAGTTCGCTAAAGATATTGAT
TTTGAAAAACCTGAAGAAGCAGTAATCATCTTTAACTTACTTATAATTAATAGTTACTAT
ACTGAATAAATACATAAATAATGTTAAAAATTTAATTTTCAACAAACAAAGTTGAATGCT
GTTTAAATTGAGAATTTTATTTCACATCATTTTGAAGCAAGGTTATTAAAAGCAATTTTA
TTATGAAAAAATAGGCTAAAAAGAGTGAAATGAGAAGAATTCCAGTACCTCCTCACAGAT
TAACTCCATTAAGATAAAGTTGGGAAAAGATTGTTACTACTGTTGTAGAAAATATGAAAT
TATAAATCAGAATGAACACCAAAAAGAAAGCTGTTGAAATTAAATCATCAGAACACACAC
CTGAAACCTCTGCCGTACAAAAGACTGCTGATTTCTTAAAGGCTTTCATGCTTGGTTTCG
AATTAAATGATGCTATTGCTTTACTAAGATTAGATGATTTATATATTGAATCTTTTGAAG
TTAAGGATGGTAATTAATATATTATTACCTATTTATTCAACACTGAGTCCTTTAAAATTT
TATATATAAGATGGACTTTTAAAATTTTGAAAACGTTTTTAAAATTAACTTAATTTTTAT
TATAAAAGTTAAAAATTTAAGTGGTGATAACTTGTCTCGTGCCATTGGTAGAATTACTGG
TGAAAAAGGTAAAACTAAGTTTGCTATAGAGAATGCATCAAGAACAAGAATCGTAGTTGC
TGATAAAAAGATTCACATATTAGGTATGATTTTTAGCATTAAAATTTTTGAAATAAAGAC
TAAATAAAATATCACTAAAATAAAAGGTTCATTCAGTAATATAAAATGCGCTAGAGAAGC
TATCTGCTCCTTGATTATGGGTAGCCCACCTGGTAAAGTTTACTCTCAACTTAAATTCAT
TGCTAAAAGATACTTAGAAAAGTTTTGA