Identifiers and Description
Gene Model Identifier
TTHERM_00444570Standard Name
KHD3 (KH domain-containing protein 3)Aliases
PreTt03825 | 51.m00191 | 3704.m00047Description
KHD3 zinc knuckle proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Molecular Function
- nucleic acid binding (IEA) | GO:0003676
- zinc ion binding (IEA) | GO:0008270
- RNA binding (IEA) | GO:0003723
Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 11.2%
TetraMine Data
TTHERM_00444570
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_10900.1 9.997093137033517e-262 zinc knuckle family protein (6
68 aa)
Oxytricha Contig8621.0.g10 2.0000236365077126e-43 KH domain
DictyBase DDB_G0293554 3.001129784945559e-41 sf1 on chromosome: 6 position
3035802 to 3037515
SGD YLR116W 7.002785992501305e-33 MSL5 Component of the commitme
nt complex, which defines the
first step in the splicing pat
hway; essential protein that i
nteracts with Mud2p and Prp40p
, forming a bridge between the
intron ends; also involved in
nuclear retention of pre-mRNA
WormBase WBGene00013808 3.998693556225637e-29 locus:sfa-1 status:Confirmed
UniProt:G5EF97 protein_id
:CAB55136.2
Stentor Coeruleus SteCoe_3903 1.0530617357553812e-20
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00444570(coding)
ATGTCTAATCCAATTCCAATAGCACTAGGCGTCTTTGAAGGATAGGAAAATCTAGATTAA
TAAGAGTAAAATAAAGATAAAAAAGATAGTCAAAGCGAAAATAATTCTTAAAAAATTAAA
GATTCAGAGGAAGTCATTATCAGTGAAGAGATTGACAATGGTGGTTATTTTGATAGAACA
AATTACGATGTTTATAATGTTAAAAGGGATGGCTACTTCTTTGCAGATGAAGTTAAAGTT
GATGGTGAAACTATTTTCACAATTCCAATAGAGAAGCAATTAGAAGATAATGAAGACTTG
CCAAAAAGAAAATCAAGATGGGGTGATAGACCTTAAAGGAGAAGAAAAGTTTAAGTAAAC
CATATATTTAATCCTTTGCAAGGACTAACTACTGGAAATGGTCTTTTGTCTATTACAGCA
GATGGTTATAAGTATGGCTAATAATATCCTGATAAAAAAGAAGAAGAAGAGGAGAAATTT
TCAAGATGGGGACCTGAATACGAAAAGACTTTCCATCCTCCTCCTTTGAACTACATTCCT
CAAAATATTAACGATGATGATTTAGAATACATAATCAGACTCTACAGGTTAGACGAAATA
TAAAATAAAATGATTAATAAAATTCAAACACTCGAAGATGATTCTGATTGTAGGTCTCCA
TCTCCTGACCCAATTTACAATGAATAAGGTAAAAGAATCAACACTAGAGATTACAGAGAA
TAAGAGTCTTTGTAGAAAGAAAAATATAATTTAATAGAAGAAGCAATGAGAATTAATCCT
GCTTTTATTCCTCCTCACGATTTCAAGGTTTAGAAAAAGCAAAAGAAAATTTATCTACCA
GAACAAAATGCAGAATTATTAAAACAAAAAGTAATTGGACCTAAGGGTTAAACTCACAAA
AGACTTGAGTAGGAAAGTGGCTGTAAAATTAGTATTAAGGGTAAAGGCTCAGGAAACGGA
ATGAAGAGAGTAGAAAATGATTTCAATGATAAGCTTCATATTCTTTTGTAAGGTGATACT
GATGAATAATTAGAAAAGGGTGCTACACTCGTTGATGAAATTCTTAGAGGAGAAGATAAA
TCTAATGAAAATACTTTTAAGGGAGGAGATCTTGTTATCATTCATGATGTCCTCAATAGA
GATTTTTGTTCAAAATGCCATTAAACTGGACATAGAGATTTTGAATGTTAATCAAAGACC
ACTTTTAATAAGGTTGATGTCAAGTGTATTTATTGTGGAGATAAAGGCCATATTTCAGCT
GATTGTAAATTTAAGAGAGAGAGATAGCAGTAAAATAGAGAGAGAGGAAATGATGTAGAT
ATCAATACTTAATTCGAGTAATTTATAAATTAAGTTGAAGGAGATGATAGATTACTTAGT
AGCTTTGGTGGCAGAGCGAACTAAAATAAGTCAATTACAAATACTAGCTTTATTACTGAT
GCTATAGAAATAGATCCTAATCTTCTTATGATCAAAGCAGATGATAACCTTTACAAAAAT
ACAAAAGAACCAACATTTTCGAATGGACCTTCAGCTCCTTCTTATTCTAACGACTTCCAA
TAAGGAGGTTACAACAACAATTTCAATAAAAATAGAGACTATAGAAGGGAAACAAATGAT
TAATTTAATAAAAATAATGATAGATTTAATAGTTAGAGTGGCAGTAATAGATAATAAGAC
TCTTCTAGAGCACCTATACCTCCTCCTATCCTACCTCCAGGAAGTGATCATTTAGCCCCA
CCCTCATTTATGAATTAAAATACAATGGGTCATTTTGGTGGTTTACCCATGCCTGGTATA
GCTAATCCTTCAGCTATGCCACCACCTGGTATGCCAGGCAGTTTATATCCTCCTCCAATG
CCTCCAGGTGGTTATCCTATGTTTAATCCATATGCCCCACCAGGTTTTGGAGGTCTTCCT
CCTCCTATGTTCCCCCCACACCCTCACTTAAATGTTCCATACGGATATAATCCCTTATAT
CCATAAGGATATAATTAATAAAATTAACCACACAAATGA>TTHERM_00444570(protein)
MSNPIPIALGVFEGQENLDQQEQNKDKKDSQSENNSQKIKDSEEVIISEEIDNGGYFDRT
NYDVYNVKRDGYFFADEVKVDGETIFTIPIEKQLEDNEDLPKRKSRWGDRPQRRRKVQVN
HIFNPLQGLTTGNGLLSITADGYKYGQQYPDKKEEEEEKFSRWGPEYEKTFHPPPLNYIP
QNINDDDLEYIIRLYRLDEIQNKMINKIQTLEDDSDCRSPSPDPIYNEQGKRINTRDYRE
QESLQKEKYNLIEEAMRINPAFIPPHDFKVQKKQKKIYLPEQNAELLKQKVIGPKGQTHK
RLEQESGCKISIKGKGSGNGMKRVENDFNDKLHILLQGDTDEQLEKGATLVDEILRGEDK
SNENTFKGGDLVIIHDVLNRDFCSKCHQTGHRDFECQSKTTFNKVDVKCIYCGDKGHISA
DCKFKRERQQQNRERGNDVDINTQFEQFINQVEGDDRLLSSFGGRANQNKSITNTSFITD
AIEIDPNLLMIKADDNLYKNTKEPTFSNGPSAPSYSNDFQQGGYNNNFNKNRDYRRETND
QFNKNNDRFNSQSGSNRQQDSSRAPIPPPILPPGSDHLAPPSFMNQNTMGHFGGLPMPGI
ANPSAMPPPGMPGSLYPPPMPPGGYPMFNPYAPPGFGGLPPPMFPPHPHLNVPYGYNPLY
PQGYNQQNQPHK>TTHERM_00444570(gene)
ATGTCTAATCCAATTCCAATAGCACTAGGCGTCTTTGAAGGATAGGAAAATCTAGATTAA
TAAGAGTAAAATAAAGATAAAAAAGATAGTCAAAGCGAAAATAATTCTTAAAAAATTAAA
GATTCAGAGGAAGTCATTATCAGTGAAGAGATTGACAGTACGAGATAGAATTTCTTAATT
TAAAATAGATTGATCGCAATCACCTTCATCTTTAAATCCAAAATAAAGTTATAAAAGCAT
GCAGGCTAATTATAAAAAATAATTAGGCAGCAAGATTGAAGAGATTTATTTTAAGTTTTG
TATTTTAAAATAAAATAAGATTACTGGTTTAAAAAACTTAAAGATTCATTCAATAATTTG
AGGATTAAATATTTATTTGCAGATTTCAATCTAGCTTAAATTGCATTAAAAAAATAGTTT
ATCACAAAGAAAATTCTCTAATTTGAACTATTGATAGATGAATGATTGAAAGATTATAAA
CATATTTATATAGTTAAAACAATTAATATTAAATTTTTTATTTTTAAATTTATATATAGA
TGGTGGTTATTTTGATAGAACAAATTACGATGTTTATAATGTTAAAAGGGATGGCTACTT
CTTTGCAGATGAAGTTAAAGTTGATGGTGAAACTATTTTCACAATTCCAATAGAGAAGCA
ATTAGAAGATAATGAAGACTTGCCAAAAAGAAAATCAAGATGGGGTGATAGACCTTAAAG
GAGAAGAAAAGTTTAAGTAAACCATATATTTAATCCTTTGCAAGGACTAACTACTGGAAA
TGGTCTTTTGTCTATTACAGCAGATGGTTATAAGTATGGCTAATAATATCCTGATAAAAA
AGAAGAAGAAGAGGAGAAATTTTCAAGGTATTTTTTTTAAGACCATTCTTCTTAGTATTT
TAATTTTAATATTGTAAAAAGATGGGGACCTGAATACGAAAAGACTTTCCATCCTCCTCC
TTTGAACTACATTCCTCAAAATATTAACGATGATGATTTAGAATACATAATCAGACTCTA
CAGGTTAGACGAAATATAAAATAAAATGATTAATAAAATTCAAACACTCGAAGATGATTC
TGATTGTAGGTCTCCATCTCCTGACCCAATTTACAATGAATAAGGTAAAAGAATCAACAC
TAGAGATTACAGAGAATAAGAGTCTTTGTAGAAAGAAAAATATAATTTAATAGAAGAAGC
AATGAGAATTAATCCTGCTTTTATTCCTCCTCACGATTTCAAGGTACTAAACTTTTCAAT
AAAATAAAAAAGATATTTAAGTTTATTTATTTAAAAATTTTAAGAAAAAAGCTTACAATA
AATGCACTAAAATTAGAAAATATTATTTAAATTTTAAAACAAATTATTAAAATAATTATA
AATTCAAAAATTGTTTTACAATGTTAGATTAAAATTGAAGAAAAAGTGAAAGCAATTAAA
AAGATTAAAAATCTATTTATAATTTAAATAGCGAGATATTTATTACATAGACAAAACTCA
AAATATTATTTTAATAATTTAATAATATATTTCTAACAAAATTTAATAATACAATGAGCT
TCAATAATTTAGAATCTATCTATTATTTAATAAAGAAAGAATTGTCAAAAACAAACATAT
TTATTACTAAAAATTTACATTTTAACTTTCTTAATTAATATAGGTTTAGAAAAAGCAAAA
GAAAATTTATCTACCAGAACAAAATGCAGAATTATTAAAACAAAAAGTAATTGGACCTAA
GGGTTAAACTCACAAAAGACTTGAGTAGGAAAGTGGCTGTAAAATTAGTATTAAGGGTAA
AGGCTCAGGAAACGGAATGAAGAGAGTAGAAAATGATTTCAATGATAAGCTTCATATTCT
TTTGTAAGGTGATACTGATGAATAATTAGAAAAGGGTGCTACACTCGTTGATGAAATTCT
TAGAGGAGAAGATAAATCTAATGAAAATACTTTTAAGGGAGGAGATCTTGTTATCATTCA
TGATGTCCTCAATAGAGATTTTTGTTCAAAATGCCATTAAACTGGACATAGAGATTTTGA
ATGTTAATCAAAGTAAAAATGTTGCAATTTATAAACATTAATTTAATGATTTCTTTTTTT
AAAAAAAATAGGACCACTTTTAATAAGGTTGATGTCAAGTGTATTTATTGTGGAGATAAA
GGCCATATTTCAGCTGATTGTAAATTTAAGAGAGGTAAATAATAAAAATAAAATAATATG
ATAAATATGAAAAAATCTTTTATCATAAATATAGAGAGATAGCAGTAAAATAGAGAGAGA
GGAAATGATGTAGATATCAATACTTAATTCGAGTAATTTATAAATTAAGTTGAAGGAGAT
GATAGATTACTTAGTAGCTTTGGTGGCAGAGCGAACTAAAATAAGTCAATTACAAATACT
AGCTTTATTACTGATGCTATAGAAATAGATCCTAATCTTCTTATGATCAAAGCAGATGAT
AACCTTTACAAAAATACAAAAGAACCAACATTTTCGAATGGACCTTCAGCTCCTTCTTAT
TCTAACGACTTCCAATAAGGAGGTTACAACAACAATTTCAATAAAAATAGAGACTATAGA
AGGGAAACAAATGATTAATTTAATAAAAATAATGATAGATTTAATAGTTAGAGTGGCAGT
AATAGATAATAAGACTCTTCTAGAGCACCTATACCTCCTCCTATCCTACCTCCAGGAAGT
GATCATTTAGGTAGCTAAAATTTCATTTCATGTATTATTAAAAATTAACTATTTTCTAAA
TAATTAGCCCCACCCTCATTTATGAATTAAAATACAATGGGTCATTTTGGTGGTTTACCC
ATGCCTGGTATAGCTAATCCTTCAGCTATGCCACCACCTGGTATGCCAGGCAGTTTATAT
CCTCCTCCAATGCCTCCAGGTGGTTATCCTATGTTTAATCCATATGCCCCACCAGGTTTT
GGAGGTCTTCCTCCTCCTATGTTCCCCCCACACCCTCACTTAAATGTTCCATACGGATAT
AATCCCTTATATCCATAAGGATATAATTAATAAAATTAACCACACAAATGA