Identifiers and Description

Gene Model Identifier

TTHERM_00051720

Standard Name

KHD1 (KH domain-containing protein 1)

Aliases

PreTt11353 | 3.m01791 | 3824.m03106

Description

KH domain containing protein

Genome Browser (Macronucleus)

GBrowse

Genome Browser (Micronucleus)

GBrowse

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.3%

TetraMine Data

TTHERM_00051720

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_01596.19.997093137033517e-262KH domain-containing protein (
694 aa)
OxytrichaContig17537.0.g937.002264059090237e-38KH domain
WormBaseWBGene000227380.00000000000040012475857291343status:Confirmed UniProt:Q7Z
145 protein_id:CCD61630.1
SGDYLR116W0.000000000006001570085597868MSL5 Component of the commitme
nt complex, which defines the
first step in the splicing pat
hway; essential protein that i
nteracts with Mud2p and Prp40p
, forming a bridge between the
intron ends; also involved in
nuclear retention of pre-mRNA

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00051720(coding)
ATGAGACATTCGTCATCTAAATCTAGATCAAGATCAAAGGGTAACAAACGCGGTGGATAA
AAAAGATCTTCACAAGATAGAGGATCTTATAAAAGAAGCTTCAGTAGATCTGATAGCAGA
GGAAAAGATTCAAAAAGAGGGGGAGGAGATTTCAATTCTAGAAGACGCAACAAATTTTCA
GATCCTTCATAGAATGGTGGAAGTAGCTAAAGAGGTGGCTTTAGCAGTGGTTTCAATGAT
TCAAATAGTAATTAGAGAAACGATGATAGAGGTTATCAGAGTGGAAATGGAGGATTTGGA
TCTAAAGGAGGATAATAGTATGGATCTAGAAACGATAATGGATACAAAGGAGATTAGAAT
GGAAATGGAGGCTTTTCTTACAACAATGTCAGGAATTCTTAAGGACCTAATATGAATGAA
GACATAGACAGAATTTTACAGAATTCAAAACCTGAATCTTCATACAACCGTAACTAATAT
GATAGATCTTCAAATGGAGTAGGCTTTAACAATAATTTTTCAGGAAATTCAGGATAAGGA
AGTAGTTACGATAACTACCAGATATCTACTTCTTCATTAAGATAATCTTCTTCAAAAACT
TTCCGCAAAGTCCCTATTCCTTAAGATGGGAAATTTAATTATATTGGACTAATTATTGGC
CCAAAGGGTTCTAAACAAAAGTAATTAGAAGAAATGACTCATTGTAAAATTTTAATCAGG
GGAAAGGGCTCTCAAAAATAAGGTGCACCTTAATAGCCTGATGATAATGAAGACTTACAT
GTTTTAATTGAGGCAGATTCTGAAATGAATGCAAACAAAGCCATGAAAGAAATCGAAAAT
ATCATTTTTATGGATGATGACTAAAAAGTTAAGCTCCGTGATTAGTAACTTAAGTCTAAT
TACAATGGTGGCTAGTAACATAGACCAGATGGTTAATATAACAATAATAATGACAGATAG
ACTTTCATTTAAATTCCAAAAGATGTTGTAGGACTTGTGATTGGAAAGAAAGGTGAAACA
ATCAAATAAATCAAAGAAAAGTCAGGTGCTGATAAAGTTTACATGCAACCTGAAAATTAA
CGCAATTAATAAGATGATTCCTATTAAAATCTTATTGTAGAAGGCTCTGCAAGCTAAGTT
GAAAGAGTTAGAGAGCTAGTCAATGACATTAAAAACTAATAGCAACAAAAGAAATAAGGG
TACAACGATAATTTTAATAACAACAATTTCAATAATAGAGGTGGTAATTAAAAGCAAGAA
GCTAGAATAGAAATGGAAATACCAGCAAATTTGGCTGGTTTAGTCATTGGATCTAAAGGC
TCTACCTTGCAATAAGTGGGTAGTGAAACAAGGACACGTTGTTAAATTAATTAAAACAAT
AATGACAACAGAAAAATATTAATAATTGTTGGTAATACAGAAGAGGATTGCCAAAGAGCT
AAAGAAATATTCTAAGAAAAAATGAACAGCAGAATGGCAGGAAACTAAAATGACAGAGAC
AATAACTAAAGAGGAGGTGGTTTCAATAATAGAGGGAATAATAATAGTAGTAGAGGAGGA
GGCAGAACCTTTAATAACCGTCGTCCTCGTAAGAATGCTGATGATGATGAAATTGTAGAA
GCATATTAGTTTGAATCATATCCTACTTACAATCTTGAAGAATAAATGATGCATAGCTAG
TAAATGTTGCTTAACATGCAAAATTTCTACAATCAATAGGGTTAATATCCTCCTTAGTAA
TAAGTTCCACCTGCATACGGCAATCAGCAATAATAGTAACCCAGTGATTCATATGCTGTA
GATTCCAAACCTGGTTAGTCAACTGATAATTTAACTAACACTAATATTTCTACTTCAGAA
AATAACACCGTAAATTCTATTTCACCTCAACCCCAATAATAAGCTGCAACTACAGAATTT
TAGCAGTATCCATAACCATATGGTTAAGCACCAGGCTATGATCCAAACTAAGTGTAAATG
TAAATCTCATAATATCTTTAATATTAGCAAATGTACTTGCAAACACAAAGCTACACAGGA
CCTGTTATTGAAGAAGTACTAGCTGACGGAACCATAGTTTCTCTAAGTTAAAATGCAGAT
GACAAAAAGAAAGGTAAGAGAGGAGGTAGAAGATGA


>TTHERM_00051720(protein)
MRHSSSKSRSRSKGNKRGGQKRSSQDRGSYKRSFSRSDSRGKDSKRGGGDFNSRRRNKFS
DPSQNGGSSQRGGFSSGFNDSNSNQRNDDRGYQSGNGGFGSKGGQQYGSRNDNGYKGDQN
GNGGFSYNNVRNSQGPNMNEDIDRILQNSKPESSYNRNQYDRSSNGVGFNNNFSGNSGQG
SSYDNYQISTSSLRQSSSKTFRKVPIPQDGKFNYIGLIIGPKGSKQKQLEEMTHCKILIR
GKGSQKQGAPQQPDDNEDLHVLIEADSEMNANKAMKEIENIIFMDDDQKVKLRDQQLKSN
YNGGQQHRPDGQYNNNNDRQTFIQIPKDVVGLVIGKKGETIKQIKEKSGADKVYMQPENQ
RNQQDDSYQNLIVEGSASQVERVRELVNDIKNQQQQKKQGYNDNFNNNNFNNRGGNQKQE
ARIEMEIPANLAGLVIGSKGSTLQQVGSETRTRCQINQNNNDNRKILIIVGNTEEDCQRA
KEIFQEKMNSRMAGNQNDRDNNQRGGGFNNRGNNNSSRGGGRTFNNRRPRKNADDDEIVE
AYQFESYPTYNLEEQMMHSQQMLLNMQNFYNQQGQYPPQQQVPPAYGNQQQQQPSDSYAV
DSKPGQSTDNLTNTNISTSENNTVNSISPQPQQQAATTEFQQYPQPYGQAPGYDPNQVQM
QISQYLQYQQMYLQTQSYTGPVIEEVLADGTIVSLSQNADDKKKGKRGGRR


>TTHERM_00051720(gene)
TTTAATAAACAGATTTTAATACTTATAAGTACAAGTTTTAAGAATATATTTAAAATGAGA
CATTCGTCATCTAAATCTAGATCAAGATCAAAGGGTAACAAACGCGGTGGATAAAAAAGA
TCTTCACAAGATAGAGGATCTTATAAAAGAAGCTTCAGTAGATCTGATAGCAGAGGAAAA
GATTCAAAAAGAGGGGGAGGAGATTTCAATTCTAGAAGACGCAACAAATTTTCAGATCCT
TCATAGAATGGTGGAAGTAGCTAAAGAGGTGGCTTTAGCAGTGGTTTCAATGATTCAAAT
AGTAATTAGAGAAACGATGATAGAGGTTATCAGAGTGGAAATGGAGGATTTGGATCTAAA
GGAGGATAATAGTATGGATCTAGAAACGATAATGGATACAAAGGAGATTAGAATGGAAAT
GGAGGCTTTTCTTACAACAATGTCAGGAATTCTTAAGGACCTAATATGAATGAAGACATA
GACAGAATTTTACAGAATTCAAAACCTGAATCTTCATACAACCGTAACTAATATGATAGA
TCTTCAAATGGAGTAGGCTTTAACAATAATTTTTCAGGAAATTCAGGATAAGGAAGTAGT
TACGATAACTACCAGATATCTACTTCTTCATTAAGATAATCTTCTTCAAAAACTTTCCGC
AAAGTCCCTATTCCTTAAGATGGGAAATTTAATTATATTGGACTAATTATTGGCCCAAAG
GGTTCTAAACAAAAGTAATTAGAAGAAATGACTCATTGTAAAATTTTAATCAGGTAAATT
TCCAAAAAATAAATACTGCTTTTAAATTATGTCTGTATGAATAATTATAAAAGCAAATTT
CGCCCATTATTTCATAAATATTTATTTACTTTTTTATGATTTTTTCTCATTATTTTGCTT
TTCGAATTTACATTGAGCTGGGTATATCTACTTAACCTGACTGATGTCTATCAATTAATT
AATTATTTAATTAATTAGTTGCCAAATCAATTATAATTATTTAATTTTCCCTAAATCACT
TTTTTTTATAATAATAATTATAATAATATTCAAATTTTAATTAAAGTAACTCAATTTTTT
TTGCTTTCAAAAAATTAAATAAATAAATGATTAATTAACAAATAATTATTATATATATCT
TAATCATTTAAATACTTAATAATAGGGGAAAGGGCTCTCAAAAATAAGGTGCACCTTAAT
AGCCTGATGATAATGAAGACTTACATGTTTTAATTGAGGCAGATTCTGAAATGAATGCAA
ACAAAGCCATGAAAGAAATCGAAAATATCATTTTTATGGATGATGACTAAAAAGTTAAGC
TCCGTGATTAGTAACTTAAGTCTAATTACAATGGTGGCTAGTAACATAGACCAGATGGTT
AATATAACAATAATAATGACAGATAGACTTTCATTTAAATTCCAAAAGATGTTGTAGGAC
TTGTGATTGGTAAAAACATTTTCTTTTATTTTTTCATTTTTTACAATGTTTATTAATTTA
TTAATAGGAAAGAAAGGTGAAACAATCAAATAAATCAAAGAAAAGTCAGGTGCTGATAAA
GTTTACATGCAACCTGAAAATTAACGCAATTAATAAGATGATTCCTATTAAAATCTTATT
GTAGAAGGCTCTGCAAGCTAAGTTGAAAGAGTTAGAGAGCTAGTCAATGACATTAAAAAC
TAATAGCAACAAAAGAAATAAGGGTACAACGATAATTTTAATAACAACAATTTCAATAAT
AGAGGTGGTAATTAAAAGCAAGAAGCTAGAATAGAAATGGAAATACCAGCAAATTTGGCT
GGTTTAGTCATTGGATCTAAAGGCTCTACCTTGCAATAAGTGGGTAGTGAAACAAGGACA
CGTTGTTAAATTAATTAAAACAATAATGACAACAGAAAAATATTAATAATTGTTGGTAAT
ACAGAAGAGGATTGCCAAAGAGCTAAAGAAATATTCTAAGAAAAAATGAACAGCAGAATG
GCAGGAAACTAAAATGACAGAGACAATAACTAAAGAGGAGGTGGTTTCAATAATAGAGGG
AATAATAATAGTAGTAGAGGAGGAGGCAGAACCTTTAATAACCGTCGTCCTCGTAAGAAT
GCTGATGATGATGAAATTGTAGAAGCATATTAGTTTGAATCATATCCTACTTACAATCTT
GAAGAATAAATGATGCATAGCTAGTAAATGTTGCTTAACATGCAAAATTTCTACAATCAA
TAGGGTTAATATCCTCCTTAGTAATAAGTTCCACCTGCATACGGCAATCAGCAATAATAG
TAACCCAGTGATTCATATGCTGTAGATTCCAAACCTGGTTAGTCAACTGATAATTTAACT
AACACTAATATTTCTACTTCAGAAAATAACACCGTAAATTCTATTTCACCTCAACCCCAA
TAATAAGCTGCAACTACAGAATTTTAGCAGTATCCATAACCATATGGTTAAGCACCAGGC
TATGATCCAAACTAAGTGTAAATGTAAATCTCATAATATCTTTAATATTAGCAAATGTAC
TTGCAAACACAAAGCTACACAGGACCTGTTATTGAAGAAGTACTAGCTGACGGAACCATA
GTTTCTCTAAGTTAAAGTAATTAATTATTCAATTCAGGTTATTATCAAAATAAAAAATAA
AAATTTGATAAAAAGCTTAATTTTTGCTAACCTAATTATAAAGTAAATAAAAAGAAGCAA
AGTTAGTAAAATATAAACTGGATTTATTAATTTTGTTTACAGAAATTATTAACAGCTAAA
TAAATTTATGAATATTTAAAATTAAATTAAATTAAAAATTTTATTTTAATTAAAATAGAT
GCAGATGACAAAAAGAAAGGTAAGAGAGGAGGTAGAAGATGA