Identifiers and Description

Gene Model Identifier

TTHERM_00388620

Standard Name

KDF1 (KinetoDesmal Fiber 1)

Aliases

PreTt24857 | 41.m00264

Description

Kinetodesmal fiber protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• vesicle (IDA) | GO:0031982 | Ref:SUPR000140
• ciliary basal body (IDA) | GO:0036064 | Ref:SUPR000140
• macronucleus (IDA) | GO:0031039 | Ref:SUPR000140

Domains

• ( PF02172 ) KIX domain
• ( PF06705 ) SF-assemblin/beta giardin
• ( PF08518 ) Spa2 homology domain (SHD) of
• ( PF02189 ) Immunoreceptor tyrosine-based activation motif

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 9.9%

TetraMine Data

TTHERM_00388620

WebApollo

Fullscreen View

Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_04491.1	3.0005183738819142e-162	hypothetical protein (263 aa)
Oxytricha	Contig1313.1.g99	4.0009493637353324e-18	SF-assemblin/beta giardin

General Information

No Data fetched for General Information

Associated Literature

1. Ref:21127172: Gould SB, Kraft LG, van Dooren GG, Goodman CD, Ford KL, Cassin AM, Bacic A, McFadden GI, Waller RF (2011) Ciliate pellicular proteome identifies novel protein families with characteristic repeat motifs that are common to alveolates. Molecular biology and evolution 28(3):1319-31
2. Ref:SUPR000140

Sequences

>TTHERM_00388620(coding)
ATGAATAACTCAGGATATATCTCAAACAGCACTCAAATCACTAACTAGAGCTAAATAGAT
CGTGTTTAAAAGGTTTTCGATCGTATCAACAATATCCAAAACAGTATCGAAGGTGAAAAG
CAAAGCAGATTTACTGTTATTACTCAACTCATATTATAATTCGAGCAAACTCTTAACGAA
TTAAGCGCCCGTAAAGAAGAAAAATTTGAAAATTTAGCTGAAAAACTCCGCAAGTTGGAA
GAAGCTATTGTTGAAGAATCTGAGAAATCTGAGACATAAGATAATGATTCTCAACGTGAA
TTAATTAACTTAGAAAAAAATTGCAAGCGTCTTCTTGAACTTAATAGCAAGGAGCGTGTT
GAAAGTGAAAAGAAGCTTGCTCAGCGCATTGCTTAGCAATTCGAAGCTCTCACTGTCGAT
ATTAATAAAGAAGCTTAAGCTTAAATGACATCTCATGGCTACCTTGATACCTACCTTAAT
GAGGATCTCCCTCGTTTGAAGGATGAATTAAGCTATGAAATTTAATAACGTCAAGAAGTT
GAACAAAAAATTCATAGTCAATTTATGGATAGAATTTCTGAACTAAAGGAGATATTTGAA
CGTGAACGCAAGGAAAGAGAAATTAAGGAAGAATAGCTTGTTGTTTTCCTTAAAGAGCTC
TCTCACCGCACATAAGACAACCTTGTCCGTATTAAAAGAGATAGAGAAAGAAATGAAGAA
TAAATTGTTACCTTAATTGAAAGTGTTATTGAAAAATTGAAGAAAGAAATGGTTGAGCTC
GAATTGTGA

>TTHERM_00388620(protein)
MNNSGYISNSTQITNQSQIDRVQKVFDRINNIQNSIEGEKQSRFTVITQLILQFEQTLNE
LSARKEEKFENLAEKLRKLEEAIVEESEKSETQDNDSQRELINLEKNCKRLLELNSKERV
ESEKKLAQRIAQQFEALTVDINKEAQAQMTSHGYLDTYLNEDLPRLKDELSYEIQQRQEV
EQKIHSQFMDRISELKEIFERERKEREIKEEQLVVFLKELSHRTQDNLVRIKRDRERNEE
QIVTLIESVIEKLKKEMVELEL

>TTHERM_00388620(gene)
AACAATAAAATTAAATAAAAAAAGCATAACCTCATTCAGAGATTCTAAAAGAAAACTGCA
ATAAATAAACAAATAATAAATTAAAAAGTTCAGTCAAATAAGTAATAAAAAATATCAATA
AAGGTAAAGAAAATGAATAACTCAGGATATATCTCAAACAGCACTCAAATCACTAACTAG
AGCTAAATAGATCGTGTTTAAAAGGTTTTCGATCGTATCAACAATATCCAAAACAGTATC
GAAGGTGAAAAGCAAAGCAGATTTACTGTTATTACTCAACTCATATTATAATTCGAGCAA
ACTCTTAACGAATTAAGCGCCCGTAAAGAAGAAAAATTTGAAAATTTAGCTGAAAAACTC
CGCAAGTTGGAAGAAGCTATTGTTGAAGAATCTGAGAAATCTGAGACATAAGATAATGAT
TCTCAACGTGAATTAATTAACTTAGAAAAAAATTGCAAGCGTCTTCTTGAACTTAATAGC
AAGGAGCGTGTTGAAAGTGAAAAGAAGCTTGCTCAGCGCATTGCTTAGCAATTCGAAGCT
CTCACTGTCGATATTAATAAAGAAGCTTAAGCTTAAATGACATCTCATGGCTACCTTGAT
ACCTACCTTAATGAGGATCTCCCTCGTTTGAAGGATGAATTAAGCTATGAAATTTAATAA
CGTCAAGAAGTTGAACAAAAAATTCATAGTCAATTTATGGATAGAATTTCTGAACTAAAG
GAGATATTTGAACGTGAACGCAAGGAAAGAGAAATTAAGGAAGAATAGCTTGTTGTTTTC
CTTAAAGAGCTCTCTCACCGCACATAAGACAACCTTGTCCGTATTAAAAGAGATAGAGAA
AGAAATGAAGAATAAATTGTTACCTTAATTGAAAGTGTTATTGAAAAATTGAAGAAAGAA
ATGGTTGAGCTCGAATTGTGA