Identifiers and Description
Gene Model Identifier
TTHERM_00558350Standard Name
IGR1 (Induced during Granule Regeneration)Aliases
PreTt07932 | 73.m00176 | 3735.m00070Description
IGR1 hypothetical protein; Dense core granule (DCG) protein; induced during DCG regeneration- function unknown; non-architectural cargo protein that localizes to and is secreted from DCGs during regulated exocytosis; not required for DCG lattice assemblyGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- dense core granule (IDA) | GO:0031045 | Ref:16014006
Biological Process
- vesicle organization (IEP) | GO:0016050 | Ref:12456006
Domains
- ( PF07601 ) Protein of unknown function (DUF1562)
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: Yes
Presense Probability: 92.5%
TetraMine Data
TTHERM_00558350
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Stentor Coeruleus SteCoe_10321 0 Tetrahymena borealis EI9_17147.1 2.000808864924972e-124 hypothetical protein (311 aa)
General Information
No Data fetched for General Information
Associated Literature
- Ref:16014006: Bowman GR, Smith DG, Michael Siu KW, Pearlman RE, Turkewitz AP (2005) Genomic and proteomic evidence for a second family of dense core granule cargo proteins in Tetrahymena thermophila. The Journal of eukaryotic microbiology 52(4):291-7
- Ref:12456006: Haddad A, Bowman GR, Turkewitz AP (2002) New class of cargo protein in Tetrahymena thermophila dense core secretory granules. Eukaryotic cell 1(4):583-93
- Ref:11779800: Bowman GR, Turkewitz AP (2001) Analysis of a mutant exhibiting conditional sorting to dense core secretory granules in Tetrahymena thermophila. Genetics 159(4):1605-16
Sequences
>TTHERM_00558350(coding)
ATGAGAAAGATCATTCTTTTGTTAGCTATCATTAGTTTGGCACTCTGCTAAGAACTTATA
GTTGAAAAAGTAGCAGGATAATACAACTCAGGTTAAAAGTTCGCAAAATCCTGGTAAAAT
TCATAATGGAACGATTATCAAGATTTCGCTATTTATGGATGGTTTAAGATTGACTCTTCA
TACTAAATTGCTGAGTGGTCAACTGGTTTCCACTTTACTTCAAATTAGGACAAAGATTGG
ACTAACGCCTCTGCTCCTGGTGATAGAGTATTGGCATTCTGGGTTATTGGAAATACTCTC
CACAATCCTACTTACTCTTTAGCAAGAGGTAATACTAATTATTACGAAAATCTTTCCTTC
GCTGCTGGAGATACTAATAAATGGGCTTTTATTTATGTTACACATGGTTCTAGCTAATAA
GCATAATACGTCTATTACTTACTTCCTTCCTCTGGTGTTGTAACCAAGAAAATAGCTTCA
ATCACTCATAAAACTTCCACCTTCTATCAAATCAATGTTGGTTAATCATTCAGCTTCAAA
TATTTCCCTGGTTCTTTTTGGAGACTCTCACTTATTGCTGGACCTAATGCTTACAGAGAA
AGTGGTTTTGAATAGTTCTAAAACATATAACCTGACGTTGTTCCTAGCTGTCCTATTCTT
TTCACTGGATGTAACTATAGTGGTAAGGGTGATTCTTTATGCTAAAGCTCTCCTTCTTAT
AACGTTACTGCTGTTCACTCAATCTACCTCCCTGCTAACTTCACTGCTACTTTACATGAT
CAAGCTAATTACGCAGGAAAGAAGATCGTTTATTCCCAAAGTATTGAATGTATTACCTAA
TTAAATTGGGCTTACTTACTCTCTACTCATGCCATTACTATTGAGGATGAAACTAAAACT
GTTCTCAGAAGAAACAACAGAAGAAATTGA>TTHERM_00558350(protein)
MRKIILLLAIISLALCQELIVEKVAGQYNSGQKFAKSWQNSQWNDYQDFAIYGWFKIDSS
YQIAEWSTGFHFTSNQDKDWTNASAPGDRVLAFWVIGNTLHNPTYSLARGNTNYYENLSF
AAGDTNKWAFIYVTHGSSQQAQYVYYLLPSSGVVTKKIASITHKTSTFYQINVGQSFSFK
YFPGSFWRLSLIAGPNAYRESGFEQFQNIQPDVVPSCPILFTGCNYSGKGDSLCQSSPSY
NVTAVHSIYLPANFTATLHDQANYAGKKIVYSQSIECITQLNWAYLLSTHAITIEDETKT
VLRRNNRRN>TTHERM_00558350(gene)
ATGAGAAAGATCATTCTTTTGTTAGCTATCATTAGTTTGGCACTCTGCTAAGAACTTATA
GTTGAAAAAGTAGCAGGATAATACAACTCAGGTTAAAAGTTCGCAAAATCCTGGTAAAAT
TCATAATGGAACGATTATCAAGATTTCGCTATTTATGGATGGTTTAAGATTGACTCTTCA
TACTAAATTGCTGAGTGGTCAACTGGTTTCCACTTTACTTCAAATTAGGACAAAGATTGG
ACTAACGCCTCTGCTCCTGGTGATAGAGTATTGGCATTCTGGGTTATTGGAAATACTCTC
CACAATCCTACTTACTCTTTAGCAAGAGGTAATACTAATTATTACGAAAATCTTTCCTTC
GCTGCTGGAGATACTAATAAATGGGCTTTTATTTATGTTACACATGGTTCTAGCTAATAA
GCATAATACGTCTATTACTTACTTCCTTCCTCTGGTGTTGTAACCAAGAAAATAGCTTCA
ATCACTCATAAAACTTCCACCTTCTATCAAATCAATGTTGGTTAATCATTCAGCTTCAAA
TATTTCCCTGGTTCTTTTTGGAGACTCTCACTTATTGCTGGACCTAATGCTTACAGAGAA
AGTGGTTTTGAATAGTTCTAAAACATATAACCTGACGTTGTTCCTAGCTGTCCTATTCTT
TTCACTGGATGTAACTATAGTGGTAAGGGTGATTCTTTATGCTAAAGCTCTCCTTCTTAT
AACGTTACTGCTGTTCACTCAATCTACCTCCCTGCTAACTTCACTGCTACTTTACATGAT
CAAGCTAATTACGCAGGAAAGAAGATCGTTTATTCCCAAAGTATTGAATGTATTACCTAA
TTAAATTGGGCTTACTTACTCTCTACTCATGCCATTACTATTGAGGATGAAACTAAAACT
GTTCTCAGAAGAAACAACAGAAGAAATTGA