Identifiers and Description
Gene Model Identifier
TTHERM_00483490Standard Name
IBD2 (Interactive BromoDomain Protein 2)Aliases
PreTt06283 | 58.m00255 | 3719.m00109 | Brop-6Description
bromodomain proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
- ( PF00439 ) Bromodomain
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 9.9%
TetraMine Data
TTHERM_00483490
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_14230.1 3.0001680331469735e-143 bromodomain containing protein
(231 aa)
Oxytricha Contig18584.0.g108 2.00017271388466e-38 Bromodomain
DictyBase DDB_G0293800 3.9992896861436003e-19 DDB_G0293800 on chromosome: 6
position 3334534 to 3337072
Stentor Coeruleus SteCoe_3545 3.1391327920480296e-17 WormBase WBGene00017423 4.0002685161515803e-16 status:Confirmed UniProt:O76
561 protein_id:CCD69431.1
SGD YDL070W 0.00000000000001000191320216021 BDF2 Protein involved in trans
cription initiation at TATA-co
ntaining promoters; associates
with the basal transcription
factor TFIID; contains two bro
modomains; corresponds to the
C-terminal region of mammalian
TAF1; redundant with Bdf1p
General Information
No Data fetched for General Information
Associated Literature
- Ref:29523178: Saettone A, Garg J, Lambert JP, Nabeel-Shah S, Ponce M, Burtch A, Thuppu Mudalige C, Gingras AC, Pearlman RE, Fillingham J (2018) The bromodomain-containing protein Ibd1 links multiple chromatin-related protein complexes to highly expressed genes in Tetrahymena thermophila. Epigenetics & chromatin 11(1):10
Sequences
>TTHERM_00483490(coding)
ATGTCAGCAAAAATAAAATCTACTTTAAAGTTTGTCACGGAAACATCAACCAGAAAAGAA
GATTATAAAAAAATGAATACAGTATTATAATCACTATTTGATAATAGCGACTCTCTAGAG
TTTAGATAACCTGTGGATTACTTAGCTTTAGGATTAACTGACTATCCAAATGTGGTTAAA
AAGCCAATGGACTTATCTACTGTTAAAAATAAAATAAATACACAAAGTTATGACACAATA
GAAGACTTTTTAGATGATATTTAATTAATTTGGGATAATTGTAAATTATATAATGCTTAA
GGATCTTGGATTTGGAAGTTAGCAGATAAATTAGACAAGTACTATAAAAAGCTTATAAAA
AATTATTTGCCTATGGTCCAAGTTCAATAAACAGTTGGAAAAAAAGAGAAGAAAGATGAT
AAAGCAAGCAAATAATAAGATGTGTATATTGATAATTTTTAAGAAGAAAAAAGCTCATTT
ACTGCTAAAATTAAATAACTTACAGAAGAATAGTTAGGTAGTATAGTAGAATAAATTAGA
TTAGAAAATCCTTAAGCATTTATAAGATTAGATAATAAAAAGTTATAAGTTATTGTTGAT
AGCATCAGTTTTGAATCTTTATAAAATTATAATACTTAAATCGATAACTGGTTAATCCCT
GTTAAGACTACAAATAAAAGAAGTAAAAATAATTGA>TTHERM_00483490(protein)
MSAKIKSTLKFVTETSTRKEDYKKMNTVLQSLFDNSDSLEFRQPVDYLALGLTDYPNVVK
KPMDLSTVKNKINTQSYDTIEDFLDDIQLIWDNCKLYNAQGSWIWKLADKLDKYYKKLIK
NYLPMVQVQQTVGKKEKKDDKASKQQDVYIDNFQEEKSSFTAKIKQLTEEQLGSIVEQIR
LENPQAFIRLDNKKLQVIVDSISFESLQNYNTQIDNWLIPVKTTNKRSKNN>TTHERM_00483490(gene)
ATGTCAGCAAAAATAAAATCTACTTTAAAGTTTGTCACGTAATTAGTTAAGCTTATAGTT
AGAGTTGTTAGGAATGACTAAAGCATAATTCTATTTAGAAATTGACATTCACAATTTAAA
AAGGCGTTATCGAAGTTAATATTTATTAATTATTTTCAAAAGGGAAACATCAACCAGAAA
AGAAGATTATAAAAAAATGAATACAGTATTATAATCACTATTTGATAATAGCGACTCTCT
AGAGTTTAGATAACCTGTGGATTACTTAGGTAAAACGTTTACTTCATTAGAATATGCTTT
TTTAACTTTTAATCAATAAAATTTAGCTTTAGGATTAACTGACTATCCAAATGTGGTTAA
AAAGCCAATGGACTTATCTACTGTTAAAAATAAAATAAATACACAAAGTTATGACACAAT
AGAAGACTTTTTAGATGATATTTAATTAATTTGGGATAATTGTAAATTATATAATGCTTA
AGGATCTGTAAATATTTTATTTATTAAGATACTTATAAACAAATATGATTAGTTATCGAT
ACATAAATATATGTAAATCTTTTAAATAATTCATTTAATTATTAACAGTGGATTTGGAAG
TTAGCAGATAAATTAGACAAGTACTATAAAAAGCTTATAAAAAATTATTTGCCTATGGTC
CAAGTTCAATAAACAGTTGGAAGTAAATTAATTTACATATTTACTAAATATTGATCGATG
ATAAATTTTTAAAATTAAAATATTAGAAAAAGAGAAGAAAGATGATAAAGCAAGGTAAAC
TTAATTTTTTGAATGAGATAATGAACAAAGAATTTTTAAAAGAAAGATAATGAAATTGAT
TAATCTTTTTTATTAAGGTATTTTAATGAGCTAAAATATTTTTTATAAATTAGCAAATAA
TAAGATGTGTATATTGATAATTTTTAAGAAGAAAAAAGCTCATTTACTGCTAAAATTAAA
TAACTTACAGAAGAATAGTTAGGTAGTATAGTAGAATAAATTAGATTAGAAAATCCTTAA
GCATTTATAAGATTAGATAATAAAAAGTTATAAGTTATTGTTGATAGCATCAGTTTTGAA
TCTTTATAAAATTATAATACGTAAATTTTGAATATTTTTTGAAAACCTATTGAAATTATT
TCTATAAAAATAGTTAAATCGATAACTGGTTAATCCCTGTTAAGACTACAAATAAAAGAA
GTAAAAATAATTGA