Identifiers and Description

Gene Model Identifier

TTHERM_00313710

Standard Name

HRT1 (Ubiquitin ligase; HRT1 ortholog)

Aliases

PreTt03558 | 30.m00367 | 3810.m01979

Description

RING finger protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.2%

TetraMine Data

TTHERM_00313710

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_03383.1	1.0004460510701209e-64	RING finger protein (94 aa)
Oxytricha	Contig254.1.g19	2.000704504372864e-47	RING-H2 zinc finger
DictyBase	DDB_G0287629	4.000820122464668e-47	rbx1 on chromosome: 5 position 496993 to 497681
WormBase	WBGene00004320	1.999534248571833e-46	locus:rbx-1 RING-box protein 1 status:Confirmed UniPro t:Q23457 protein_id:CAA94801 .1
SGD	YOL133W	2.9993743585281133e-40	HRT1 RING finger containing su bunit of Skp1-Cullin-F-box ubi quitin protein ligases (SCF); required for Gic2p, Far1p, Sic 1p and Cln2p degradation; may tether Cdc34p (a ubiquitin con jugating enzyme or E2) and Cdc 53p (a cullin) subunits of SCF
Stentor Coeruleus	SteCoe_30495	1.9287498479639178e-22

General Information

No Data fetched for General Information

Associated Literature

1. Ref:SUPR000156

Sequences

>TTHERM_00313710(coding)
ATGATTGAGTTATTTTTCAGAACAGAAATAGTTCATATAAAGAACAAATAGTAAGAAGCT
TTGATCAAAAAATAAAATATTAGGTACTCAAAATTTATTTATATAAATATTTGTGAAGAA
AGAAAAATTAAATAAATCATAAATAGCTAATAAATTTAAGAGTTTATACTATAAAAAAGA
ATAAGTAAAGATTTAATAAATAAATAAATGGAAACAGAAAAAAGATTCGAAGTCAAAAAA
TGGAACGCTGTTGCTCTTTGGCAATGGGATATTGAAGTTGAAAATTGCGCCATTTGCAAG
AACAACATTATGGAACCTTGTATTGAATGTGATGCCAACTAAAACTCAAATAGTGCTTCC
GAATGTGATGTTGCTTGGGGTACTTGCAATCACGCATTCCATTTCCATTGTATTTCCAGA
TGGTTAAAAACTCGTAATACTTGTCCTCTTGATTCTCGTCAATGGGATTATCAAAGATAT
GGTCGTTGA

>TTHERM_00313710(protein)
MIELFFRTEIVHIKNKQQEALIKKQNIRYSKFIYINICEERKIKQIINSQQIQEFILQKR
ISKDLINKQMETEKRFEVKKWNAVALWQWDIEVENCAICKNNIMEPCIECDANQNSNSAS
ECDVAWGTCNHAFHFHCISRWLKTRNTCPLDSRQWDYQRYGR

>TTHERM_00313710(gene)
ATGATTGAGTTATTTTTCAGAACAGAAATAGTTCATATAAAGAACAAATAGTAAGAAGCT
TTGATCAAAAAATAAAATATTAGGTACTCAAAATTTATTTATATAAATATTTGTGAAGAA
AGAAAAATTAAATAAATCATAAATAGCTAATAAATTTAAGAGTTTATACTATAAAAAAGA
ATAAGTAAAGATTTAATAAATAAATAAATGGAAACAGAAAAAAGATTCGAAGTCAAAAAA
TGGAACGCTGTTGCTCTTTGGCAATGGGATATTGAAGTTGAAAATTGCGCCATTTGCAAG
AAGTAAGTTTAATCATCTCACAACCTTTTTTTATTAAGTGCTTGGCATGTCTTGTTTTAC
ATTAATTAGATTATTTTCAAAGATTTCGTATAAAAATTTTAAAAGCCAAATAGGTTTTAT
AAGCACATAAAATAAAATGTTTAACTATATTTGTAACCATATTTAATTTAAATAATTAGC
AACATTATGGAACCTTGTATTGAATGTGATGCCAACTAAAACTCAAATAGTGCTTCCGAA
TGTGATGTTGCTTGGGGTACTTGCAATCACGCATTCCATTTCCATTGTATTTCCAGATGG
TTAAAAACTCGTAATACTTGTCCTCTTGATTCTCGTCAATGGGATTATCAAAGATATGGT
CGTTGA