Gene Model Identifier
TTHERM_00551070
Standard Name
HPL7
Aliases
PreTt29211 | 72.m00134
Description
Heterochromatin protein
Genome Browser (Macronucleus)
Genome Browser (Micronucleus)
Cellular Component Molecular Function Biological Process
( PF06658 ) Protein of unknown function (DUF1168)
( PF00385 ) 'chromo' (CHRromatin Organization MOdifier) domain
Tetrahymena Functional Genomics Database:
Signal Peptide Present?: No
TTHERM_00551070
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( SD02326 ) Macronucleus: Neo4 upstream and 2 HA tags inserted after the ATG of TCD2 ( SD02327 ) Macronucleus: Neo4 upstream and 2 HAtags inserted after the ATG of TCD2 ( SD02495 ) Macronucleus: Two HA tags after ATG of TCD2, neo4 in 5’ flank, inserted into MTT1 locus for over expression, need Cd ( SD02496 ) Macronucleus: Two HA tags after ATG of TCD2, neo4 in 5’ flank, inserted into MTT1 locus for over expression, need Cd ( SD02506 ) Macronucleus: TCD2 was knocked out with neo4, then the wt TCD2 gene with a bsr1cassette upstream was somatically reintroduced into the cell ( SD02507 ) Macronucleus: TCD2 was knocked out with neo4, then the wt TCD2 gene with a bsr1cassette upstream was somatically reintroduced into the cell
(v.2006 protein sequences)
Source Identifier Score Description
Tetrahymena borealis EI9_07338.1 2.0007019863683806e-141 heterochromatin protein (422 a
DictyBase DDB_G0283023 0.0000009995106777214876 hcpA on chromosome: 4 position
WormBase WBGene00001995 0.000005000363240844623 locus:hpl-1 status:Confirmed
Oxytricha Contig9832.0.g37 0.00003998524687536623 Chromo (CHRromatin Organisatio
No Data fetched for General Information
Ref:28692189 : Wiley EA, Horrell S, Yoshino A, C Schornak C, Bagnani C, L Chalker D (2017) Diversification of HP1-like Chromo Domain Proteins in Tetrahymena thermophila. The Journal of eukaryotic microbiology ( ):
>TTHERM_00551070(coding)ATG AAA AAG AGA AGA CAA TCA ACA AAT AAT GAA AAG CAG GAA GAT CTT TAT GAA CCT GAA AAG ATA TTA GAT AAA AAA GTT AAT TAA AGT GGT ACT TCC TAT TTG GTT AAA TGG AAA GGT TTT AGG GCT TCA CAA GCA ACA TGG GAA TTT TAT AAA AAC ATA TCT CAT TGC AAT TGG CTT TTT GAA GAT TGG GAA GAG TAG TAA AAT AGA AAG GAA TTA CAA AAA ATC AAG AAT ATG GAT AGG ATA ATA GAC AAA AAA TAT GTA AAT AGT AAA GTT TTT TAT TTG GTT TCT CTA AAA AAT GGC GGA GAA GAT GTA TGG ATT AGA AGA AAG GCT TTG ATG CTT GAC CAT GCC GAT AAA ATT TCT GAA TAT GAA AAG AGT GAT TAA TTG GTT GGG GCT AAA AGA AAA TAT TAA TAG AAA AGA TTT AGC AAA AGC TAA GAT AGA TTT CTT AGC AGT GAT GAA GAT TTG AGC GAT TCT TAA AGT GAT AAA AAT TCA GAT AAT AGC TAA AAT AAT TCA AGC AAT AGC GAT AAT AGT TAA AGT AGA AGC GGA AGC AGT TCA GAT TCA TGC AGT AGA AGC TCT TCA GAA GAT AAT TAA GAT GAA AAT ACA AAT TAA AGA GGA AAA AGT AAT GGT AGA AGA AAG GGT AGA ATT TAT AAC AAT AAA AAA AAA CCG AAG AGA GGA GGA AAT AGA AAA AAT TAA AAA GGA TAG AAT ATT AAT GAT TCA AAT AGT AGC TCA GAT GAG AAT AGT GAG CAA GAA GTC TCT GAA TCA AGA AGA ATA GTT AAA ACA AAA AGA AAA ATT CCA AAA AAA TGC AAA ATT TTA TAT GAT AAG CTT CCT TTT TAT GGT ATA CTT GGT ATA GAT GAA CCA AAA TCT ATA AAA AAT ATG GTC ATA GAC AAA AGA GTA GGG ACG AAG GAT GAT GGA TAT TTT GCT TGT GAT ATT ATT TGG AAA ATT AGA CCT AAT AAA CAA TAG CCT GTC GAT AGT AGA GTC AGC AGA AAA GAT ATA AAA GAG TTC TAT CCT CTT ATT TTA ATA GAA TTT TAT GAG TAT AAT ATG ACA TAT AAT GGT GAA GTA GTC AAT GCT GAT GAT GAA GAT GAC TTA GAA TAT TAC AAT GGT GAT GAT GAA GAA GAT GCT GAT CAT GAT GAT GAG TAT TAT TAA AAA TTA TAA AGA AAA GCT GGT AAA AAA CCT CTT GAA AAC GAA AAC TCA GAA GCT GAT AAT TAG GAT GAA AAA TCT GAA GAT TCA TTT AGC TTT TAG AAT TAG ATT TAC TAT GGG TAT GCT AAA ACT AAT GAA TAG AAA AAG TAT GTT AAA TTT GAT GAA AAA TTC TTC AAC AAC AAT CAA ATG GAA GAA ATG TGA >TTHERM_00551070(protein)M K K R R Q S T N N E K Q E D L Y E P E K I L D K K V N Q S G T S Y L V K W K G F R A S Q A T W E F Y K N I S H C N W L F E D W E E Q Q N R K E L Q K I K N M D R I I D K K Y V N S K V F Y L V S L K N G G E D V W I R R K A L M L D H A D K I S E Y E K S D Q L V G A K R K Y Q Q K R F S K S Q D R F L S S D E D L S D S Q S D K N S D N S Q N N S S N S D N S Q S R S G S S S D S C S R S S S E D N Q D E N T N Q R G K S N G R R K G R I Y N N K K K P K R G G N R K N Q K G Q N I N D S N S S S D E N S E Q E V S E S R R I V K T K R K I P K K C K I L Y D K L P F Y G I L G I D E P K S I K N M V I D K R V G T K D D G Y F A C D I I W K I R P N K Q Q P V D S R V S R K D I K E F Y P L I L I E F Y E Y N M T Y N G E V V N A D D E D D L E Y Y N G D D E E D A D H D D E Y Y Q K L Q R K A G K K P L E N E N S E A D N Q D E K S E D S F S F Q N Q I Y Y G Y A K T N E Q K K Y V K F D E K F F N N N Q M E E M >TTHERM_00551070(gene)ATG AAA AAG AGA AGA CAA TCA ACA AAT AAT GAA AAG CAG GAA GAT CTT TAT GAA CCT GAA AAG ATA TTA GAT AAA AAA GTT AAT TAA AGT GGT ACT TCC TAT TTG GTT AAA TGG AAA GGT TTT AGG GCT TCA CAA GCA ACA TGG GTA AAT ACA TAA ATT TAT TTC CAT AAT TAG AGC TCA ATA AAA AAT GTG TTA TTA TAA ACC AGG AAT TTT ATA AAA ACA TAT CTC ATT GCA ATT GGC TTT TTG AAG ATT GGG AAG AGT AGT AAA ATA GAA AGG AAT TAC AAA AAA TCA AGA ATA TGG ATA GGA TAA TAG ACA AAA AAT ATG TAA ATA GTA AAG TTT TTT ATT TGG TTT CTC TAA AAA ATG GCG GAG AAG ATG TAT GGA TTA GAA GAA AGG CTT TGA TGC TTG ACC ATG CCG ATA AAA TTT CTG AAT ATG AAA GTA ATT ATT TTG AAG ATT TAA ATT TCT TTT ACA TTT ATT TAT ATT TGA TTT ATA TAA AGA GAG TGA TTA ATT GGT TGG GGC TAA AAG AAA ATA TTA ATA GAA AAG ATT TAG CAA AAG CTA AGA TAG ATT TCT TAG CAG TGA TGA AGA TTT GAG CGA TTC TTA AAG TGA TAA AAA TTC AGA TAA TAG CTA AAA TAA TTC AAG CAA TAG CGA TAA TAG TTA AAG TAG AAG CGG AAG CAG TTC AGA TTC ATG CAG TAG AAG CTC TTC AGA AGA TAA TTA AGA TGA AAA TAC AAA TTA AAG AGG AAA AAG TAA TGG TAG AAG AAA GGG TAG AAT TTA TAA CAA TAA AAA AAA ACC GAA GAG AGG AGG AAA TAG AAA AAA TTA AAA AGG ATA GAA TAT TAA TGA TTC AAA TAG TAG CTC AGA TGA GAA TAG TGA GCA AGA AGT CTC TGA ATC AAG AAG AAT AGT TAA AAC AAA AAG AAA AAT TCC AAA AAA ATG CAA AAT TTT ATA TGA TAA GCT TCC TTT TTA TGG TAT ACT TGG TAT AGA TGA ACC AAA ATC TAT AAA AAA TAT GGT CAT AGA CAA AAG AGT AGG GAC GAA GGA TGA TGG ATA TTT TGC TTG TGA TAT TAT TTG GAA AAT TAG ACC TAA TAA ACA ATA GCC TGT CGA TAG TAG AGT CAG CAG AAA AGA TAT AAA AGA GTT CTA TCC TCT TAT TTT AAT AGA ATT TTA TGA GTA TAA TAT GAC ATA TAA TGG TGA AGT AGT CAA TGC TGA TGA TGA AGA TGA CTT AGA ATA TTA CAA TGG TGA TGA TGA AGA AGA TGC TGA TCA TGA TGA TGA GTA TTA TTA AAA ATT ATA AAG AAA AGC TGG TAA AAA ACC TCT TGA AAA CGA AAA CTC AGA AGC TGA TAA TTA GGA TGA AAA ATC TGA AGA TTC ATT TAG CTT TTA GAA TTA GAT TTA CTA TGG GTA TGC TAA AAC TAA TGA ATA GAA AAA GTA TGT TAA ATT TGA TGA AAA ATT CTT CAA CAA CAA TCA AAT GGA AGA AAT GTG A
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