Identifiers and Description
Gene Model Identifier
TTHERM_00245410Standard Name
HPL6 (Heterochromatin Protein 1-Like 6)Aliases
PreTt02436 | 21.m00267Description
Heterochromatin proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- nucleus (IEA) | GO:0005634
- chromatin (IEA) | GO:0000785
- macronucleus (IDA) | GO:0031039 | Ref:28692189
Molecular Function
- chromatin binding (IEA) | GO:0003682
Biological Process
- chromatin assembly or disassembly (IEA) | GO:0006333
Domains
- ( PF00385 ) 'chromo' (CHRromatin Organization MOdifier) domain
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.7%
TetraMine Data
TTHERM_00245410
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_00603.1 6.998985483803218e-56 hypothetical protein (377 aa)
Oxytricha Contig19010.0.g64 0.000000009996807949091551 Chromo (CHRromatin Organisatio
n MOdifier) domain
WormBase WBGene00017990 0.0002999184360822198 locus:cec-4 status:Confirmed
UniProt:Q19972 protein_id
:CCD70433.1
General Information
No Data fetched for General Information
Associated Literature
- Ref:28692189: Wiley EA, Horrell S, Yoshino A, C Schornak C, Bagnani C, L Chalker D (2017) Diversification of HP1-like Chromo Domain Proteins in Tetrahymena thermophila. The Journal of eukaryotic microbiology ( ):
Sequences
>TTHERM_00245410(coding)
ATGAGTGACACAACAACAACAGCAAATTCAAAGAAAAACACCAAAATAAATGGTAAATAA
CAAGGTAGTAAAGATAAGGCTGAGAAGAAAGAGAAGGCTATTAACAAAAAGAAATATGAA
AGCGAAGATGAAGAAGAAGAGGAAGAGGAGGAATTCTACATTGTAGAAAAAATATTAGAT
TATAAAAAGATAAAGAATAGAGATCTATTTTTAGTAAAATGGGAAGGGTACGAAGAGCTA
ACTTGGGAACCCAAATCTAATTTGTCAAATGTAAAGCAACTTGTTGAGAATTTTTTGAAA
ACCTTAAAAGATAAAGGAAAAAAAGAAAATTCTGAAAATCTTGAAAGCTCGAGTGCTTTG
CAAGAAGGGAGTGAATCTAAAAAGCAATAATTAAGCGGTGGAAAGATATAAAAAAAAGAA
GTAAAAAGCCCTATATCTATTAGCAAAGAGAAATAGGCAGAGAAAGTAAAGTAAGATGAA
GGATCTCATTTAAAAAGAGATGTAGAAGATCACCATAATATTTCTATTTCTTCAATGAAG
GGTAAAAAAGATGATGATGGAGAGTAGAATGAAGAACAAGAAAACAAAGTTGTTGTTAAA
TAAGAAGACGTAGATGAGGAAAAGCAAAGCACCAAGAAAAGAGGAGAAGAAGAAGAGGAA
TAGTAATAATAATAAAATAGTAAACAAATAGAGGAGGAAGAAGAAGGTAAAGATGTATAG
AAAGAAAAGAAATAATAGAATGAAGAAAAATAAGATATCAAGCACTTAGAATAAAAAGAA
AGTAAAGAAGACCACGATGCTATATAATAATAATAAAAGAACACTAGTCTCAATAAAAAA
AGAAAGAAAGAAGAATAAAGTTAGGATGATATTGATGAATAAAATGAATAAGATAAACCA
CAAGATAAGGTAAAACACTTACCTGAAATTTTAGGAAATCTTGAAGAACACATTCCTTTA
GAAATATCTAAAGCTGTCTATAAAACATCTAAGTTTTAGTATCTAGTTTAGTGGAAGTAG
CAATAAGGCATTAAAATTATACCCAGTTTTATTTTCTCTGACGATTTATTAAAAAGATAT
AGTGATCTCATAGTACATTTTTATGAAGACAAAGCCTTAAAAAGAAAGTGA>TTHERM_00245410(protein)
MSDTTTTANSKKNTKINGKQQGSKDKAEKKEKAINKKKYESEDEEEEEEEEFYIVEKILD
YKKIKNRDLFLVKWEGYEELTWEPKSNLSNVKQLVENFLKTLKDKGKKENSENLESSSAL
QEGSESKKQQLSGGKIQKKEVKSPISISKEKQAEKVKQDEGSHLKRDVEDHHNISISSMK
GKKDDDGEQNEEQENKVVVKQEDVDEEKQSTKKRGEEEEEQQQQQNSKQIEEEEEGKDVQ
KEKKQQNEEKQDIKHLEQKESKEDHDAIQQQQKNTSLNKKRKKEEQSQDDIDEQNEQDKP
QDKVKHLPEILGNLEEHIPLEISKAVYKTSKFQYLVQWKQQQGIKIIPSFIFSDDLLKRY
SDLIVHFYEDKALKRK>TTHERM_00245410(gene)
ATGAGTGACACAACAACAACAGCAAATTCAAAGAAAAACACCAAAATAAATGGTAAATAA
CAAGGTAGTAAAGATAAGGCTGAGAAGAAAGAGAAGGCTATTAACAAAAAGAAATATGAA
AGCGAAGATGAAGAAGAAGAGGAAGAGGAGGAATTCTACATTGTAGAAAAAATATTAGAT
TATAAAAAGATAAAGAATAGAGATCTATTTTTAGTAAAATGGGAAGGGTACGAAGAGCTA
ACTTGGGAACCCAAATCTAATTTGTCAAATGTAAAGCAACTTGTTGAGAATTTTTTGAAA
ACCTTAAAAGATAAAGGAAAAAAAGAAAATTCTGAAAATCTTGAAAGCTCGAGTGCTTTG
CAAGAAGGGAGTGAATCTAAAAAGCAATAATTAAGCGGTGGAAAGATATAAAAAAAAGAA
GTAAAAAGCCCTATATCTATTAGCAAAGAGAAATAGGCAGAGAAAGTAAAGTAAGATGAA
GGATCTCATTTAAAAAGAGATGTAGAAGATCACCATAATATTTCTATTTCTTCAATGAAG
GGTAAAAAAGATGATGATGGAGAGTAGAATGAAGAACAAGAAAACAAAGTTGTTGTTAAA
TAAGAAGACGTAGATGAGGAAAAGCAAAGCACCAAGAAAAGAGGAGAAGAAGAAGAGGAA
TAGTAATAATAATAAAATAGTAAACAAATAGAGGAGGAAGAAGAAGGTAAAGATGTATAG
AAAGAAAAGAAATAATAGAATGAAGAAAAATAAGATATCAAGCACTTAGAATAAAAAGAA
AGTAAAGAAGACCACGATGCTATATAATAATAATAAAAGAACACTAGTCTCAATAAAAAA
AGAAAGAAAGAAGAATAAAGTTAGGATGATATTGATGAATAAAATGTAATTTTTTAAAAT
TTTTAATTATTTAAATTCAAATTCAAACAAAAAGGAATAAGATAAACCACAAGATAAGGT
AAAACACTTACCTGAAATTTTAGGAAATCTTGAAGAACACATTCCTTTAGAAATATCTAA
AGCTGTCTATAAAACATCTAAGTTTTAGTATCTAGTTTAGTGGAAGTAGCAATAAGGCAT
TAAAATTATACCCAGTTTTATTTTCTCTGACGATTTATTAAAAAGATATAGTGATCTCAT
AGTACATTTTTATGAAGACAAAGCCTTAAAAAGAAAGTGA