Identifiers and Description

Gene Model Identifier

TTHERM_00245410

Standard Name

HPL6 (Heterochromatin Protein 1-Like 6)

Aliases

PreTt02436 | 21.m00267

Description

Heterochromatin protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• nucleus (IEA) | GO:0005634
• chromatin (IEA) | GO:0000785
• macronucleus (IDA) | GO:0031039 | Ref:28692189

Molecular Function

• chromatin binding (IEA) | GO:0003682

Biological Process

• chromatin assembly or disassembly (IEA) | GO:0006333

Domains

• ( PF00385 ) 'chromo' (CHRromatin Organization MOdifier) domain

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.7%

TetraMine Data

TTHERM_00245410

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_00603.1	6.998985483803218e-56	hypothetical protein (377 aa)
Oxytricha	Contig19010.0.g64	0.000000009996807949091551	Chromo (CHRromatin Organisatio n MOdifier) domain
WormBase	WBGene00017990	0.0002999184360822198	locus:cec-4 status:Confirmed UniProt:Q19972 protein_id :CCD70433.1

General Information

No Data fetched for General Information

Associated Literature

1. Ref:28692189: Wiley EA, Horrell S, Yoshino A, C Schornak C, Bagnani C, L Chalker D (2017) Diversification of HP1-like Chromo Domain Proteins in Tetrahymena thermophila. The Journal of eukaryotic microbiology ( ):

Sequences

>TTHERM_00245410(coding)
ATGAGTGACACAACAACAACAGCAAATTCAAAGAAAAACACCAAAATAAATGGTAAATAA
CAAGGTAGTAAAGATAAGGCTGAGAAGAAAGAGAAGGCTATTAACAAAAAGAAATATGAA
AGCGAAGATGAAGAAGAAGAGGAAGAGGAGGAATTCTACATTGTAGAAAAAATATTAGAT
TATAAAAAGATAAAGAATAGAGATCTATTTTTAGTAAAATGGGAAGGGTACGAAGAGCTA
ACTTGGGAACCCAAATCTAATTTGTCAAATGTAAAGCAACTTGTTGAGAATTTTTTGAAA
ACCTTAAAAGATAAAGGAAAAAAAGAAAATTCTGAAAATCTTGAAAGCTCGAGTGCTTTG
CAAGAAGGGAGTGAATCTAAAAAGCAATAATTAAGCGGTGGAAAGATATAAAAAAAAGAA
GTAAAAAGCCCTATATCTATTAGCAAAGAGAAATAGGCAGAGAAAGTAAAGTAAGATGAA
GGATCTCATTTAAAAAGAGATGTAGAAGATCACCATAATATTTCTATTTCTTCAATGAAG
GGTAAAAAAGATGATGATGGAGAGTAGAATGAAGAACAAGAAAACAAAGTTGTTGTTAAA
TAAGAAGACGTAGATGAGGAAAAGCAAAGCACCAAGAAAAGAGGAGAAGAAGAAGAGGAA
TAGTAATAATAATAAAATAGTAAACAAATAGAGGAGGAAGAAGAAGGTAAAGATGTATAG
AAAGAAAAGAAATAATAGAATGAAGAAAAATAAGATATCAAGCACTTAGAATAAAAAGAA
AGTAAAGAAGACCACGATGCTATATAATAATAATAAAAGAACACTAGTCTCAATAAAAAA
AGAAAGAAAGAAGAATAAAGTTAGGATGATATTGATGAATAAAATGAATAAGATAAACCA
CAAGATAAGGTAAAACACTTACCTGAAATTTTAGGAAATCTTGAAGAACACATTCCTTTA
GAAATATCTAAAGCTGTCTATAAAACATCTAAGTTTTAGTATCTAGTTTAGTGGAAGTAG
CAATAAGGCATTAAAATTATACCCAGTTTTATTTTCTCTGACGATTTATTAAAAAGATAT
AGTGATCTCATAGTACATTTTTATGAAGACAAAGCCTTAAAAAGAAAGTGA

>TTHERM_00245410(protein)
MSDTTTTANSKKNTKINGKQQGSKDKAEKKEKAINKKKYESEDEEEEEEEEFYIVEKILD
YKKIKNRDLFLVKWEGYEELTWEPKSNLSNVKQLVENFLKTLKDKGKKENSENLESSSAL
QEGSESKKQQLSGGKIQKKEVKSPISISKEKQAEKVKQDEGSHLKRDVEDHHNISISSMK
GKKDDDGEQNEEQENKVVVKQEDVDEEKQSTKKRGEEEEEQQQQQNSKQIEEEEEGKDVQ
KEKKQQNEEKQDIKHLEQKESKEDHDAIQQQQKNTSLNKKRKKEEQSQDDIDEQNEQDKP
QDKVKHLPEILGNLEEHIPLEISKAVYKTSKFQYLVQWKQQQGIKIIPSFIFSDDLLKRY
SDLIVHFYEDKALKRK

>TTHERM_00245410(gene)
ATGAGTGACACAACAACAACAGCAAATTCAAAGAAAAACACCAAAATAAATGGTAAATAA
CAAGGTAGTAAAGATAAGGCTGAGAAGAAAGAGAAGGCTATTAACAAAAAGAAATATGAA
AGCGAAGATGAAGAAGAAGAGGAAGAGGAGGAATTCTACATTGTAGAAAAAATATTAGAT
TATAAAAAGATAAAGAATAGAGATCTATTTTTAGTAAAATGGGAAGGGTACGAAGAGCTA
ACTTGGGAACCCAAATCTAATTTGTCAAATGTAAAGCAACTTGTTGAGAATTTTTTGAAA
ACCTTAAAAGATAAAGGAAAAAAAGAAAATTCTGAAAATCTTGAAAGCTCGAGTGCTTTG
CAAGAAGGGAGTGAATCTAAAAAGCAATAATTAAGCGGTGGAAAGATATAAAAAAAAGAA
GTAAAAAGCCCTATATCTATTAGCAAAGAGAAATAGGCAGAGAAAGTAAAGTAAGATGAA
GGATCTCATTTAAAAAGAGATGTAGAAGATCACCATAATATTTCTATTTCTTCAATGAAG
GGTAAAAAAGATGATGATGGAGAGTAGAATGAAGAACAAGAAAACAAAGTTGTTGTTAAA
TAAGAAGACGTAGATGAGGAAAAGCAAAGCACCAAGAAAAGAGGAGAAGAAGAAGAGGAA
TAGTAATAATAATAAAATAGTAAACAAATAGAGGAGGAAGAAGAAGGTAAAGATGTATAG
AAAGAAAAGAAATAATAGAATGAAGAAAAATAAGATATCAAGCACTTAGAATAAAAAGAA
AGTAAAGAAGACCACGATGCTATATAATAATAATAAAAGAACACTAGTCTCAATAAAAAA
AGAAAGAAAGAAGAATAAAGTTAGGATGATATTGATGAATAAAATGTAATTTTTTAAAAT
TTTTAATTATTTAAATTCAAATTCAAACAAAAAGGAATAAGATAAACCACAAGATAAGGT
AAAACACTTACCTGAAATTTTAGGAAATCTTGAAGAACACATTCCTTTAGAAATATCTAA
AGCTGTCTATAAAACATCTAAGTTTTAGTATCTAGTTTAGTGGAAGTAGCAATAAGGCAT
TAAAATTATACCCAGTTTTATTTTCTCTGACGATTTATTAAAAAGATATAGTGATCTCAT
AGTACATTTTTATGAAGACAAAGCCTTAAAAAGAAAGTGA