Identifiers and Description

Gene Model Identifier

TTHERM_00585190

Standard Name

HPL5 (Heterochromatin Protein 1 Like 5)

Aliases

PreTt04125 | 80.m00171 | 3675.m00069 | HPC_SH | COI13

Description

chromo domain protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• chromatin (IEA) | GO:0000785
• nucleus (IEA) | GO:0005634

Molecular Function

• chromatin binding (IEA) | GO:0003682

Biological Process

• chromatin assembly or disassembly (IEA) | GO:0006333

Domains

• ( PF00410 ) ribosomal protein S8
• ( PF00385 ) 'chromo' (CHRromatin Organization MOdifier) domain

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.4%

TetraMine Data

TTHERM_00585190

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_15192.1	1.9991517704232713e-32	hypothetical protein (755 aa)
WormBase	WBGene00001996	0.00020003864201578029	locus:hpl-2 status:Confirmed UniProt:G5EDE2 protein_id :CAB07241.1

General Information

No Data fetched for General Information

Associated Literature

1. Ref:28692189: Wiley EA, Horrell S, Yoshino A, C Schornak C, Bagnani C, L Chalker D (2017) Diversification of HP1-like Chromo Domain Proteins in Tetrahymena thermophila. The Journal of eukaryotic microbiology ( ):
2. Ref:25588944: Woehrer SL, Aronica L, Suhren JH, Busch CJ, Noto T, Mochizuki K (2015) A Tetrahymena Hsp90 co-chaperone promotes siRNA loading by ATP-dependent and ATP-independent mechanisms. The EMBO journal 34(4):559-77

Sequences

>TTHERM_00585190(coding)
ATGAATAACAAATATTATCATCAACCTTCCTAAAAATTTGAAATCCTGGCCATATTAGAT
AAAAGGGCAAATCCTAAGAATGGGAAAATAGAATATTTAGTCCAGTGGAAATAATGGCCT
CTAGATTATACATGGGAGCCTAAAAAAAACATTTAAAATTTTATTGATCAAAATGAGTTA
TTTGTTGATGATGAAGACCTTAGGAGACATTATAAGGAAAAGCAATATCGAAGAAAAATC
TTAAGAGAAGAAAGAAATAATTAAGTTGAAAAGATATGCAATAGTATAGTTAATCATACT
TAAATTAATACTACTTAGAATAGATAAAATGATAATGATTTACTTAGTAGTATTGATGAT
TATGAAGAAAATATAATATACGAGGAGAGCTTTGATGAATCGAATTATTAAGAAAACTGC
AAGGAATCATGGAGCACAAATCCGAATACATAATAAACTATTAGGAAAGATGAATTTTTT
TTATAAGAACCTGATAGCTATTCTATGAAAAAGATTTAAAATAAAAAAGAGATTAGTTCA
TTAAAAATAGAAAATACTTTTATCAACTCAAAGGCATAAAAGTTTAATAAATCTTCTTCA
GAAATAGATTTAAGTTAAAATGAAGGATCATAAAAAGTTGATTAAATGAATGAGTACTAA
GTTAATTAAGATAATTTTAAAACTGAGGGATTTTCAGAAGAAAATTTATTTGAAAATAAA
TCTGCTTCCACTGAATAAATTCAATTCTCTAATGCTAATGATAGCTAAAAGCATTAAAAA
ATTGTTAGAAAGTATTCAAATGTGATTTCAAAAGATGAAGAAATCGGAGAATTTATGAAA
GATGAAATTTCAAACATAGAAATGGAAATAAAATATTCATTTAAGGTGAATTGGAAAAGA
AGAAGCAATGGAGTCACTCCATTGTCAAAAACAATAGAAGTTCTTAGTAAAAAGCATATT
TCTCCTTAAGAAATGATTGATTATTTAACTTAATCAAATTAAATTAATAATGAAATAGAT
AAAAGTTAAAAATGA

>TTHERM_00585190(protein)
MNNKYYHQPSQKFEILAILDKRANPKNGKIEYLVQWKQWPLDYTWEPKKNIQNFIDQNEL
FVDDEDLRRHYKEKQYRRKILREERNNQVEKICNSIVNHTQINTTQNRQNDNDLLSSIDD
YEENIIYEESFDESNYQENCKESWSTNPNTQQTIRKDEFFLQEPDSYSMKKIQNKKEISS
LKIENTFINSKAQKFNKSSSEIDLSQNEGSQKVDQMNEYQVNQDNFKTEGFSEENLFENK
SASTEQIQFSNANDSQKHQKIVRKYSNVISKDEEIGEFMKDEISNIEMEIKYSFKVNWKR
RSNGVTPLSKTIEVLSKKHISPQEMIDYLTQSNQINNEIDKSQK

>TTHERM_00585190(gene)
ATGAATAACAAATATTATCATCAACCTTCCTAAAAATTTGAAATCCTGGCCATATTAGAT
AAAAGGGCAAATCCTAAGAATGGGAAAATAGAATATTTAGTCCAGTGGAAATGTATAAAA
AAATTATATTTAAAAATTAAAATAAAAAATATTTTATTTATTTTATTTAGAATGGCCTCT
AGATTATACATGGGAGCCTAAAAAAAACATTTAAAATTTTATTGATCAAAATGAGTTATT
TGTTGATGATGAAGACCTTAGGAGACATTATAAGGAAAAGCAATATCGAAGAAAAATCTT
AAGAGAAGAAAGAAATAATTAAGTTGAAAAGATATGCAATAGTATAGTTAATCATACTTA
AATTAATACTACTTAGAATAGATAAAATGATAATGATTTACTTAGTAGTATTGATGATTA
TGAAGAAAATATAATATACGAGGAGAGCTTTGATGAATCGAATTATTAAGAAAACTGCAA
GGAATCATGGAGCACAAATCCGAATACATAATAAACTATTAGTAATTATTAAATAAAAAA
TTTTAAATATCAAAATAATAATTAATTTTAAAATAATTTTTTAAATTAAGAGAAAAAGTA
TTTATTTTTATTTTTTTTTATTTAGGGAAAGATGAATTTTTTTTATAAGAACCTGATAGC
TATTCTATGAAAAAGATTTAAAATAAAAAAGAGATTAGTTCATTAAAAATAGAAAATACT
TTTATCAACTCAAAGGCATAAAAGTTTAATAAATCTTCTTCAGAAATAGATTTAAGTTAA
AATGAAGGATCATAAAAAGTTGATTAAATGAATGAGTACTAAGTTAATTAAGATAATTTT
AAAACTGAGGGATTTTCAGAAGAAAATTTATTTGAAAATAAATCTGCTTCCACTGAATAA
ATTCAATTCTCTAATGCTAATGATAGCTAAAAGCATTAAAAAATTGTTAGAAAGTATTCA
AATGTGATTTCAAAAGATGAAGAAATCGGAGAATTTATGAAAGATGAAATTTCAAACATA
GAAATGGAAATAAAATATTCATTTAAGGTGAATTGGAAAAGAAGAAGCAATGGAGTCACT
CCATTGTCAAAAACAATAGAAGTTCTTAGTAAAAAGCATATTTCTCCTTAAGAAATGATT
GATTATTTAACTTAATCAAATTAAATTAATAATGAAATAGATAAAAGTTAAAAATGA