Gene Model Identifier
TTHERM_00585180
Standard Name
HPL4
Aliases
PreTt04124 | 80.m00170 | 3675.m00068 | HPC
Description
Heterochromatin protein
Genome Browser (Macronucleus)
Genome Browser (Micronucleus)
Cellular Component Molecular Function Biological Process
( PF09311 ) Rab5 binding
( TIGR00288 ) conserved hypothetical protein TIGR00288
( PF00385 ) 'chromo' (CHRromatin Organization MOdifier) domain
Tetrahymena Functional Genomics Database:
Signal Peptide Present?: No
TTHERM_00585180
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( SD02497 ) Macronucleus: Two HA tags after ATG of TCD3, neo2 in 5’ flank, inserted into MTT1 locus for over expression, need Cd ( SD02498 ) Macronucleus: Two HA tags after ATG of TCD3, neo2 in 5’ flank, inserted into MTT1 locus for over expression, need Cd ( SD02499 ) Macronucleus: Two HA tags after ATG of TCD4, neo2 in 5’ flank, inserted into MTT1 locus for over expression, need Cd ( SD02500 ) Macronucleus: Two HA tags after ATG of TCD4, neo2 in 5’ flank, inserted into MTT1 locus for over expression, need Cd ( SD02532 ) Macronucleus: Used one neo4 construct to KO both adjacent TCD3 and TCD4 ( SD02533 ) Macronucleus: Used one neo4 construct to KO both adjacent TCD3 and TCD4
(v.2006 protein sequences)
Source Identifier Score Description
Tetrahymena borealis EI9_15193.1 4.997860539111522e-53 hypothetical protein (347 aa)
WormBase WBGene00001996 0.000005998506718272351 locus:hpl-2 status:Confirmed
No Data fetched for General Information
Ref:28692189 : Wiley EA, Horrell S, Yoshino A, C Schornak C, Bagnani C, L Chalker D (2017) Diversification of HP1-like Chromo Domain Proteins in Tetrahymena thermophila. The Journal of eukaryotic microbiology ( ):
>TTHERM_00585180(coding)ATG GAA CAA TAA TAA ACA AAT TTA GAA TAC TCT CCT TAT ATT TTT GAG ATT GAG AGC ATT TTG GAA AAG AGA ATT CAT CCT AAA ACA GGA AAA ACA GAA TTT TTA GTT TAA TGG AAA TAA TGG CCA GAT GAT CCA ACA TGG GAG CCA GCT TAA AAT ATC TAA AGC TTT TTA AAT AAC AAT AAT TAA AAG AAA AAG GAA GAT GAT TCA CAT TCT AAC TTG AAG CAA AGA AAA TTG TAA AAA ATT GAA GAC AAA GTG AAG AGG TCT GAA CAA GCA AAT AAT CAA ACT TAG AAG CTA AAT GAT AGC TTG CAA TAT TTA GAT GAA TAA ATT TAA TTT CTT TAA AAT AAA TAC GAG CTT TTT ATT TCA GAT TCA GAG ACA GAG TAA AAA AAA TTA ATT CCT GAT AAA ATA AGC GAA ATT GAA CCA GAG TAA ATT GAA AAT GAA GAA AAT ACC AAT ATG ATG AAT AAC GTT TAA ATT GAG CCA ATC TAT AAA ATA TTA GAC AAA TAA GAA GTT GAA AAT ACT ATT TAT TAT CTT ATT CTC TTT TAT GAT GAA AAA TTA CCT TAA TGG GTG AAG TAA GAA AAG CTG ATT GGC TAT GAA GAT GAA ATT TTA GAA TAT GAA AAA CAA ATA ATT TAA GAG AGC ACT GAA CTA AAC TCT AAA TAG TTA TTA GAA ACC AGT ATA TAA AGT ATA CAA AAT GAA AAT TTA TAA ATA GAA AAA GAT CAA AAA TAA GAA GAA AAT TAA TTT AAA AAG GTA ATG GAT CAA GAA AAT CTT GAA AAA AGT AAA AAT AAT TTT AAT AGG AAT CAA CAA TTT TAA AAT GAT ATA GAT GAA GGT GAT TTT TTA ACA GAT TAA ATA TAA GAT ATA GAA GCA AAC TTT ATG TTT ACT TAT AGT ATT AAT TGG AAA CCG AGA AAA GAT GGA AAC ATT CCT CTA AAT AAA TAA GTC TAA TTT GTA AAA AAA ATT ACA ATA ACG CCA TAA GAA TTC ATT GAT TAA ATC CTA TAA AAT AAA TTT CTT AAT TGA >TTHERM_00585180(protein)M E Q Q Q T N L E Y S P Y I F E I E S I L E K R I H P K T G K T E F L V Q W K Q W P D D P T W E P A Q N I Q S F L N N N N Q K K K E D D S H S N L K Q R K L Q K I E D K V K R S E Q A N N Q T Q K L N D S L Q Y L D E Q I Q F L Q N K Y E L F I S D S E T E Q K K L I P D K I S E I E P E Q I E N E E N T N M M N N V Q I E P I Y K I L D K Q E V E N T I Y Y L I L F Y D E K L P Q W V K Q E K L I G Y E D E I L E Y E K Q I I Q E S T E L N S K Q L L E T S I Q S I Q N E N L Q I E K D Q K Q E E N Q F K K V M D Q E N L E K S K N N F N R N Q Q F Q N D I D E G D F L T D Q I Q D I E A N F M F T Y S I N W K P R K D G N I P L N K Q V Q F V K K I T I T P Q E F I D Q I L Q N K F L N >TTHERM_00585180(gene)ATG GAA CAA TAA TAA ACA AAT TTA GAA TAC TCT CCT TAT ATT TTT GAG ATT GAG AGC ATT TTG GAA AAG AGA ATT CAT CCT AAA ACA GGA AAA ACA GAA TTT TTA GTT TAA TGG AAA TGT ATA TTT TAT ATT AAA AAT TCA AGT ATT TAT TAT TTA AAA TAA ATT TAA TTT AGA ATG GCC AGA TGA TCC AAC ATG GGA GCC AGC TTA AAA TAT CTA AAG CTT TTT AAA TAA CAA TAA TTA AAA GAA AAA GGA AGA TGA TTC ACA TTC TAA CTT GAA GCA AAG AAA ATT GTA AAA AAT TGA AGA CAA AGT GAA GAG GTC TGA ACA AGC AAA TAA TCA AAC TTA GAA GCT AAA TGA TAG CTT GCA ATA TTT AGA TGA ATA AAT TTA ATT TCT TTA AAA TAA ATA CGA GCT TTT TAT TTC AGA TTC AGA GAC AGA GTA AAA AAA ATT AAT TCC TGA TAA AAT AAG CGA AAT TGA ACC AGA GTA AAT TGA AAA TGA AGA AAA TAC CAA TAT GAT GAA TAA CGT TTA AAT TGA GCC AAT CTA TAA AAT ATT AGA CAA ATA AGA AGT TGA AAA TAC TAT TTA TTA TCT TAT TCT CTT TTA TGG TAA TAT TTA TTT TTG AAT TAT TTA TTG AAT TTA TTG TTT AAT AAT TTT AGA TGA AAA ATT ACC TTA ATG GGT GAA GTA AGA AAA GCT GAT TGG CTA TGA AGA TGA AAT TTT AGA ATA TGA AAA ACA AAT AAT TTA AGA GAG CAC TGA ACT AAA CTC TAA ATA GTT ATT AGA AAC CAG TAT ATA AAG TAT ACA AAA TGA AAA TTT ATA AAT AGA AAA AGA TCA AAA ATA AGA AGA AAA TTA ATT TAA AAA GGT AAT GGA TCA AGA AAA TCT TGA AAA AAG TAA AAA TAA TTT TAA TAG GAA TCA ACA ATT TTA AAA TGA TAT AGA TGA AGG TGA TTT TTT AAC AGA TTA AAT ATA AGA TAT AGA AGC AAA CTT TAT GTT TAC TTA TAG TAT TAA TTG GAA ACC GAG AAA AGA TGG AAA CAT TCC TCT AAA TAA ATA AGT CTA ATT TGT AAA AAA AAT TAC AAT AAC GCC ATA AGA ATT CAT TGA TTA AAT CCT ATA AAA TAA ATT TCT TAA TTG A
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