Identifiers and Description

Gene Model Identifier

TTHERM_00016200

Standard Name

HHT4 (Histone H Three)

Aliases

PreTt11927 | 1.m00975

Description

histone H3.3, putative

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00125 ) Core histone H2A/H2B/H3/H4

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 11%

TetraMine Data

TTHERM_00016200

WebApollo

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Tetrahymena Stock Center

• ( SD01377 ) Micronucleus: HHT4 is replaced by neo2
• ( SD01378 ) Micronucleus: HHT4 is replaced by neo2
• ( SD02640 ) Micronucleus: HHT4 is replaced by neo2
• ( SD02641 ) Micronucleus: HHT4 is replaced by neo2
• ( SD02744 ) Micronucleus: neo2 into HHT4 Macronucleus: neo2 into HHT4
• ( SD01858 )

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_02628.1	9.998285701479858e-93	histone H3 (137 aa)
WormBase	WBGene00001887	4.001371804839974e-78	locus:his-13 Histone H3 st atus:Predicted UniProt:P0889 8 protein_id:CAB05834.1
Oxytricha	Contig1081.1.g60	1.9998099689916736e-77	Core histone H2A/H2B/H3/H4
DictyBase	DDB_G0267402	2.9990539278805726e-74	H3a on chromosome: 1 position 1520754 to 1521173
SGD	YNL031C	5.001369568193564e-73	HHT2 Histone H3, core histone protein required for chromatin assembly, part of heterochrom atin-mediated telomeric and HM silencing; one of two identic al histone H3 proteins (see HH T1); regulated by acetylation, methylation, and phosphorylat ion
Stentor Coeruleus	SteCoe_17948	7.281290178321643e-33

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16908532: Cui B, Liu Y, Gorovsky MA (2006) Deposition and function of histone H3 variants in Tetrahymena thermophila. Molecular and cellular biology 26(20):7719-30

Sequences

>TTHERM_00016200(coding)
ATGGCTAGAACTAAATAAACTGCTAGAAAGTCAACTAGTATTAAGGCTCCTAGAAAACAA
TTGGCTGCCAAGGCTGCCAGAAAGTCTGCCCCCATCTCTGGTGGTATCAAAAAGCCCCAT
AAATTCAGACCTGGTACCGTTGCCTTGAGAGAAATCAGAAAGTATTAAAAGACTACTGAC
TTACTTATTAGAAAGCTCCCCTTCTAAAGACTTGTCAGAGATATTGCTATGGAAATGAAG
AGCGATATCAGATTCCAATCACAAGCTATCCTTGCCCTCCAAGAAGCTGCTGAAGCCTAC
CTAGTAGGTTTATTCGAAGATACCAACCTCTGCGCTATCCACGCTAGAAGAGTTACTATT
ATGACCAAGGATCTCCACCTTGCTAGAAGAATTAGAGGAGAAAGATTCTGA

>TTHERM_00016200(protein)
MARTKQTARKSTSIKAPRKQLAAKAARKSAPISGGIKKPHKFRPGTVALREIRKYQKTTD
LLIRKLPFQRLVRDIAMEMKSDIRFQSQAILALQEAAEAYLVGLFEDTNLCAIHARRVTI
MTKDLHLARRIRGERF

>TTHERM_00016200(gene)
ATGGCTAGAACTAAATAAACTGCTAGAAAGTCAACTAGTATTAAGGCTCCTAGAAAACAA
TTGGCTGCCAAGGCTGCCAGAAAGTCTGCCCCCATCTCTGGTGGTATCAAAAAGCCCCAT
AAATTCAGACCTGGTACCGTTGCCTTGAGAGAAATCAGAAAGTATTAAAAGACTACTGAC
TTACTTATTAGAAAGCTCCCCTTCTAAAGACTTGTCAGAGATATTGCTATGGAAATGAAG
AGCGATATCAGATTCCAATCACAAGCTATCCTTGCCCTCCAAGAAGCTGCTGAAGCCTAC
CTAGTAGGTTTATTCGAAGATACCAACCTCTGCGCTATCCACGCTAGAAGAGTTACTATT
ATGACCAAGGATCTCCACCTTGCTAGAAGAATTAGAGGAGAAAGATTCTGA