Identifiers and Description
Gene Model Identifier
TTHERM_00016200Standard Name
HHT4 (Histone H Three)Aliases
PreTt11927 | 1.m00975Description
HHT4 histone H3.4; histone H3.3- putativeGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
- ( PF00125 ) Core histone H2A/H2B/H3/H4
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 11%
TetraMine Data
TTHERM_00016200
WebApollo
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Tetrahymena Stock Center
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_02628.1 9.998285701479858e-93 histone H3 (137 aa)
WormBase WBGene00001887 4.001371804839974e-78 locus:his-13 Histone H3 st
atus:Predicted UniProt:P0889
8 protein_id:CAB05834.1
Oxytricha Contig1081.1.g60 1.9998099689916736e-77 Core histone H2A/H2B/H3/H4
DictyBase DDB_G0267402 2.9990539278805726e-74 H3a on chromosome: 1 position
1520754 to 1521173
SGD YNL031C 5.001369568193564e-73 HHT2 Histone H3, core histone
protein required for chromatin
assembly, part of heterochrom
atin-mediated telomeric and HM
silencing; one of two identic
al histone H3 proteins (see HH
T1); regulated by acetylation,
methylation, and phosphorylat
ion
Stentor Coeruleus SteCoe_17948 7.281290178321643e-33
General Information
No Data fetched for General Information
Associated Literature
- Ref:16908532: Cui B, Liu Y, Gorovsky MA (2006) Deposition and function of histone H3 variants in Tetrahymena thermophila. Molecular and cellular biology 26(20):7719-30
Sequences
>TTHERM_00016200(coding)
ATGGCTAGAACTAAATAAACTGCTAGAAAGTCAACTAGTATTAAGGCTCCTAGAAAACAA
TTGGCTGCCAAGGCTGCCAGAAAGTCTGCCCCCATCTCTGGTGGTATCAAAAAGCCCCAT
AAATTCAGACCTGGTACCGTTGCCTTGAGAGAAATCAGAAAGTATTAAAAGACTACTGAC
TTACTTATTAGAAAGCTCCCCTTCTAAAGACTTGTCAGAGATATTGCTATGGAAATGAAG
AGCGATATCAGATTCCAATCACAAGCTATCCTTGCCCTCCAAGAAGCTGCTGAAGCCTAC
CTAGTAGGTTTATTCGAAGATACCAACCTCTGCGCTATCCACGCTAGAAGAGTTACTATT
ATGACCAAGGATCTCCACCTTGCTAGAAGAATTAGAGGAGAAAGATTCTGA>TTHERM_00016200(protein)
MARTKQTARKSTSIKAPRKQLAAKAARKSAPISGGIKKPHKFRPGTVALREIRKYQKTTD
LLIRKLPFQRLVRDIAMEMKSDIRFQSQAILALQEAAEAYLVGLFEDTNLCAIHARRVTI
MTKDLHLARRIRGERF>TTHERM_00016200(gene)
ATGGCTAGAACTAAATAAACTGCTAGAAAGTCAACTAGTATTAAGGCTCCTAGAAAACAA
TTGGCTGCCAAGGCTGCCAGAAAGTCTGCCCCCATCTCTGGTGGTATCAAAAAGCCCCAT
AAATTCAGACCTGGTACCGTTGCCTTGAGAGAAATCAGAAAGTATTAAAAGACTACTGAC
TTACTTATTAGAAAGCTCCCCTTCTAAAGACTTGTCAGAGATATTGCTATGGAAATGAAG
AGCGATATCAGATTCCAATCACAAGCTATCCTTGCCCTCCAAGAAGCTGCTGAAGCCTAC
CTAGTAGGTTTATTCGAAGATACCAACCTCTGCGCTATCCACGCTAGAAGAGTTACTATT
ATGACCAAGGATCTCCACCTTGCTAGAAGAATTAGAGGAGAAAGATTCTGA