Identifiers and Description

Gene Model Identifier

TTHERM_00279750

Standard Name

GTP1 (GTPase 1 )

Aliases

PreTt04816 | 25.m00280 | TGP1 | 3694.m00065 | Rab8A

Description

Rab VIII family protein; small monomeric GTPase that regulates membrane fusion and fission events; putative intermediate compartment protein; putative involvement in regulated secretion

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

  • ( PF00071 ) Ras family
  • ( PF08477 ) Miro-like protein
  • ( PF01926 ) GTPase of unknown function
  • ( PF00025 ) ADP-ribosylation factor family
  • ( TIGR00231 ) small GTP-binding protein domain
  • ( TIGR02528 ) ethanolamine utilization protein, EutP

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 16.3%

TetraMine Data

TTHERM_00279750

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_08923.13.999453553586398e-137Ras family protein (205 aa)
OxytrichaContig7494.0.g643.0000115468388957e-66Ras family
WormBaseWBGene000042731.9997677415930956e-65locus:rab-10 status:Confirme
d UniProt:Q94148 protein_i
d:CCD70773.1
DictyBaseDDB_G02763991.9997677415930956e-65rab8B on chromosome: 2 positio
n 6878753 to 6879364
SGDYFL005W2.0007467515522948e-59SEC4 Rab family GTPase essenti
al for vesicle-mediated exocyt
ic secretion and autophagy; as
sociates with the exocyst comp
onent Sec15p and may regulate
polarized delivery of transpor
t vesicles to the exocyst at t
he plasma membrane
Stentor CoeruleusSteCoe_215271.9792598779469045e-32

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00279750(coding)
ATGTAAAATAAACAAGATTACGATACTTTACTTAAGTTTTTGCTTATTGGTGATTCAGGT
GTTGGAAAAACCTGTTTCCTAGTCAACTATTGCGAAGGTACTTTTACTAGCGCTCACTTA
TCAACAATTGGCATTGATTACAAACTTAAATATGAAGATATTGATGGAAAGCGCGTTAAG
CTCTAAATTTGGGATACTGCAGGCCAAGAAAGATTCAGAACAATTACTTAAAATTATTAC
AAAGGTGCTATGGGTATTATTCTAGCTTATAGTGTAACAGACCCCAATTCTTTCAAGAAT
ATTGCAGATTGGATGAAGTAAATTAATGAACGTGCAGATCCAAATGTTAAAAAGATTATT
ATAGCCACAAAAATTGATATGAAGGATTAAAGAAAAGTCTCTACTCGTGAAGGAGAAGAA
CTTGCTGATAGATATGGTGTAAAATTCTTTGAAACTTCAGCTAAGGAAGGCGTTAATATT
TCCGAAGCTTTCAAGTGTATTGCCCGTTAAACATTAGAATCAATGGACACATCTACTAAA
GATTAGTTTAAAATTAATTACAAACCTAATAATCCTCAACCTAATAAAAAAGATGGAAAA
GATGGAAAATGTTGTTGA


>TTHERM_00279750(protein)
MQNKQDYDTLLKFLLIGDSGVGKTCFLVNYCEGTFTSAHLSTIGIDYKLKYEDIDGKRVK
LQIWDTAGQERFRTITQNYYKGAMGIILAYSVTDPNSFKNIADWMKQINERADPNVKKII
IATKIDMKDQRKVSTREGEELADRYGVKFFETSAKEGVNISEAFKCIARQTLESMDTSTK
DQFKINYKPNNPQPNKKDGKDGKCC


>TTHERM_00279750(gene)
ATGTAAAATAAACAAGATTACGATACTTTACTTAAGTTTTTGCTTATTGGTGATTCAGGT
GTTGGAAAAACCTGTTTCCTAGTCAACTATTGCGAAGGTACTTTTACTAGCGCTCACTTA
TCAACAATTGGCATTGATTACAAACTTAAATATGAAGATATTGATGGAAAGCGCGTTAAG
CTCTAAATTTGGGATACTGCAGGCCAAGAAAGATTCAGAACAATTACTTAAAATTATTAC
AAAGGTGCTATGGGTATTATTCTAGCTTATAGTGTAACAGACCCCAATTCTTTCAAGAAT
ATTGCAGATTGGATGAAGTAAATTAATGAACGTGCAGATCCAAATGTTAAAAAGATTATT
ATAGCCACAAAAATTGATATGAAGGATTAAAGAAAAGTCTCTACTCGTGAAGGAGAAGAA
CTTGCTGATAGATATGGTGTAAAATTCTTTGAAACTTCAGCTAAGGAAGGCGTTAATATT
TCCGAAGCTTTCAAGTGTATTGCCCGTTAAACATTAGAATCAATGGACACATCTACTAAA
GATTAGTTTAAAATTAATTACAAACCTAATAATCCTCAACCTAATAAAAAAGATGGAAAA
GATGGAAAATGTTGTTGA