Identifiers and Description

Gene Model Identifier

TTHERM_00321730

Standard Name

GRL6 (GRanule Lattice )

Aliases

PreTt15991 | 32.m00235

Description

GRL6 hypothetical protein; Granule lattice protein; transcripts present at low levels; not essential for core assembly; knockout cells show change in granule morphology and reduction in granule accumulation

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

Cellular Component

Domains

  • ( PF02370 ) M protein repeat
  • ( PF07106 ) Tat binding protein 1(TBP-1)-interacting protein

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.1%

TetraMine Data

TTHERM_00321730

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_10071.10.000000000029994712494008525hypothetical protein (465 aa)

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:15958493: Cowan AT, Bowman GR, Edwards KF, Emerson JJ, Turkewitz AP (2005) Genetic, genomic, and functional analysis of the granule lattice proteins in Tetrahymena secretory granules. Molecular biology of the cell 16(9):4046-60

Sequences

>TTHERM_00321730(coding)
ATGGAACAAATAAGTCTACAAATACAAAATAGCTTAGAGGAAGCAATCAGCATTTTAAAA
ATAATTTCAAACTCATAGGAAAAGGGATTAATATTAACTGATATTTTAATCAACGACATT
TACTTCATAAGAAATTTGATTCTTTCTGGAAAAGAAGAACAACTAAATAATTATTTTTAA
GATTTAAACATAATTGTAGACAAAGCTAAATTAATCAAGAACAATCTTACATTTAGCTGT
GTTAGTAAGTATGGAAATTTTATATAAATTTTTCAATAAGAACCCATAAAAGTGATATTC
TAAAAAATCAACAGCATCCTTCAAAATATCAAAAAATAATTTCCAAAGTAAATAGATTCT
AATGATGTTTATAGCTTAGACTCTAAAAAAATAGAATAAATTTTTAAATTGCATAGTAAA
TTATAAACATTTAGACAATATTAAAACATGAATTAATTCTAATCTTATCACTAACTCACT
GTTCTCTTTAAAATGTGTAATGACTAATAAGGAGAGAGAGAAAGTCTATTAAAATCTATT
GCCTCATTCATATTACCCACTAGTGAAGGATAATAGGTAGATTACAATAGCATTTTTAAA
ATATTAGGAATTGAAAATAATAATCAGCCAATAAGTGAAAAGTCTCTTTAGTTGTTAAAT
ATTTTTTTTTAAGATTGCTGGCTAAACAGGAAATATCTATTAAGATTATTTTAACAAGGT
TGTCTGACGAGTTAAAATAAATAAATTGCTATTGAGTAATATATTCCATTAAAAGACTTA
AAACTTAAAATATGCAATGGAGACTTTGAAGGAGTGATTCAAAGTTCTCAGTCCTTGCTT
TTAGAAAAAAATAAATTATAAATCATAGGAGAAAGAAAAGTAAGTGAAATGAATTACTAA
CATAGTGTTAATTAAATATGTAAGTATAAATTATTTACTTTAGAACCTTACTGCATTGAC
TGTATTTTGTTAACTCCTATATCTAGATCACTTAATTGTCTTTTAGTAGAAGGTTAAGAA
ATAAATTTAAACTATGGAGAGTAAATAAAAGAATATAGCATTTGTCACGATAGCATGAAA
TTAAAACTAATTATCAATATGGAGAAAGAAACTATGTAAAAAAACTTATATGCTCTAATA
GATGAAAATTAAATGAAATAAAAAGATGCTTAGGATAACATGTAAAATTTAGAAACCGAA
ACTAATACAAATAACACATCAAATTAGTAAATAGATTATTTCGAAGAAACAGAAGATTAT
GATAATAAAATGTTAAATTTACACAATTAATATAATTTATAAGATAGAGAAGCAGTATCT
TTTTTTTCAAAATTTGCTCACACATCAAAAATAGTTATCAAACTATAAAAAGGTCTTAAA
ACTGAAAATGCTTTTAAAGAAGAGCTAACAAAAGAATTCTTCATAGATAATGACAATTCA
TTTTTATATTAGCTAACAAATAATGCTCATTTTTAATTTATTTACAACAAATTAACTTAG
CAGTTAAAAATTAAACAAATCTTTCAGTAAACTATTTCTAATTTTGCTTAGAGATCTTTT
TTAGAAATACCTAGAAATTAACCTTTGTAAATTTAAAAGGATACAGTGTTATTTTCACAA
TGTTAACTTAAGTACACATTTGATTTTAAATGA


>TTHERM_00321730(protein)
MEQISLQIQNSLEEAISILKIISNSQEKGLILTDILINDIYFIRNLILSGKEEQLNNYFQ
DLNIIVDKAKLIKNNLTFSCVSKYGNFIQIFQQEPIKVIFQKINSILQNIKKQFPKQIDS
NDVYSLDSKKIEQIFKLHSKLQTFRQYQNMNQFQSYHQLTVLFKMCNDQQGERESLLKSI
ASFILPTSEGQQVDYNSIFKILGIENNNQPISEKSLQLLNIFFQDCWLNRKYLLRLFQQG
CLTSQNKQIAIEQYIPLKDLKLKICNGDFEGVIQSSQSLLLEKNKLQIIGERKVSEMNYQ
HSVNQICKYKLFTLEPYCIDCILLTPISRSLNCLLVEGQEINLNYGEQIKEYSICHDSMK
LKLIINMEKETMQKNLYALIDENQMKQKDAQDNMQNLETETNTNNTSNQQIDYFEETEDY
DNKMLNLHNQYNLQDREAVSFFSKFAHTSKIVIKLQKGLKTENAFKEELTKEFFIDNDNS
FLYQLTNNAHFQFIYNKLTQQLKIKQIFQQTISNFAQRSFLEIPRNQPLQIQKDTVLFSQ
CQLKYTFDFK


>TTHERM_00321730(gene)
ATGGAACAAATAAGTCTACAAATACAAAATAGCTTAGAGGAAGCAATCAGCATTTTAAAA
ATAATTTCAAACTCATAGGAAAAGGGATTAATATTAACTGATATTTTAATCAACGACATT
TACTTCATAAGAAATTTGATTCTTTCTGGAAAAGAAGAACAACTAAATAATTATTTTTAA
GATTTAAACATAATTGTAGACAAAGCTAAATTAATCAAGAACAATCTTACATTTAGCTGT
GTTAGTAAGTATGGAAATTTTATATAAATTTTTCAATAAGAACCCATAAAAGTGATATTC
TAAAAAATCAACAGCATCCTTCAAAATATCAAAAAATAATTTCCAAAGTAAATAGATTCT
AATGATGTTTATAGCTTAGACTCTAAAAAAATAGAATAAATTTTTAAATTGCATAGTAAA
TTATAAACATTTAGACAATATTAAAACATGAATTAATTCTAATCTTATCACTAACTCACT
GTTCTCTTTAAAATGTGTAATGACTAATAAGGAGAGAGAGAAAGTCTATTAAAATCTATT
GCCTCATTCATATTACCCACTAGTGTAAATCTTAATTTTTACCTTTTAAATTATTTTTAC
TAAAGATAGACTTTTGAGTTATTGATTAGAAATTTGATTAAATATTTAAAAAATCAATTT
CATTATATTTTATATGGAAAAGGAAGGATAATAGGTAGATTACAATAGCATTTTTAAAAT
ATTAGGAATTGAAAATAATAATCAGCCAATAAGTGAAAAGTCTCTTTAGTTGTTAAATAT
TTTTTTTTAAGATTGCTGGCTAAACAGGAAATATCTATTAAGATTATTTTAACAAGGTTG
TCTGACGAGTTAAAATAAATAAATTGCTATTGAGTAATATATTCCATTAAAAGACTTAAA
ACTTAAAATATGCAATGGAGACTTTGAAGGAGTGATTCAAAGTTCTCAGTCCTTGCTTTT
AGAAAAAAATAAATTATAAATCATAGGAGAAAGAAAAGTAAGTGAAATGAATTACTAACA
TAGTGTTAATTAAATATGTAAGTATAAATTATTTACTTTAGAACCTTACTGCATTGACTG
TATTTTGTTAACTCCTATATCTAGATCACTTAATTGTCTTTTAGTAGAAGGTTAAGAAAT
AAATTTAAACTATGGAGAGTAAATAAAAGAATATAGCATTTGTCACGATAGCATGAAATT
AAAACTAATTATCAATATGGAGAAAGAAACTATGTAAAAAAACTTATATGCTCTAATAGA
TGAAAATTAAATGAAATAAAAAGATGCTTAGGATAACATGTAAAATTTAGAAACCGAAAC
TAATACAAATAACACATCAAATTAGTAAATAGATTATTTCGAAGAAACAGAAGATTATGA
TAATAAAATGTTAAATTTACACAATTAATATAATTTATAAGATAGAGAAGCAGTATCTTT
TTTTTCAAAATTTGCTCACACATCAAAAATAGTTATCAAACTATAAAAAGGTCTTAAAAC
TGAAAATGCTTTTAAAGAAGAGCTAACAAAAGAATTCTTCATAGATAATGACAATTCATT
TTTATATTAGCTAACAAATAATGCTCATTTTTAATTTATTTACAACAAATTAACTTAGCA
GTTAAAAATTAAACAAATCTTTCAGTAAACTATTTCTAATTTTGCTTAGAGATCTTTTTT
AGAAATACCTAGAAATTAACCTTTGTAAATTTAAAAGGATACAGTGTTATTTTCACAATG
TTAACTTAAGTACACATTTGATTTTAAATGA