Identifiers and Description
Gene Model Identifier
TTHERM_00138080Standard Name
FIB1 (FIBrillarin 1)Aliases
PreTt24434 | PreTt24435 | 10.m00484 | FIB | 3698.m00201Description
FIB1 rRNA 2-prime-O-methyltransferase fibrillarin; Fibrillarin; essential protein localized to nucleoli in the macronucleus of vegetative cells; involved in rRNA processing; associates with U3 snoRNAGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Cellular Component
- macronucleus (IDA) | GO:0031039 | Ref:9201715
- nucleolus (IDA) | GO:0005730 | Ref:9201715
Molecular Function
- snoRNA binding (IPI) | GO:0030515 | Ref:9201715
- methyltransferase activity (IEA) | GO:0008168
- RNA binding (IEA) | GO:0003723
Biological Process
- rRNA processing (ISS) | GO:0006364 | Ref:9201715
- tRNA processing (IEA) | GO:0008033
- rRNA processing (IEA) | GO:0006364
Domains
- ( PF01269 ) Fibrillarin
- ( PF08241 ) methyltransferase domain
- ( PF01391 ) Collagen triple helix repeat (20
- ( PF08704 ) tRNA methyltransferase complex GCD14 subunit
- ( TIGR00080 ) protein-L-isoaspartate O-methyltransferase
- ( TIGR00438 ) ribosomal RNA large subunit methyltransferase
- ( PF01135 ) Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 9.9%
TetraMine Data
TTHERM_00138080
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_05872.1 1.9994249217050915e-157 fibrillarin (1203 aa)
WormBase WBGene00001423 3.999284652801983e-113 locus:fib-1 rRNA 2-O-methylt
ransferase fibrillarin statu
s:Confirmed UniProt:Q22053
protein_id:CAB01657.1
Oxytricha Contig11749.0.g117 6.001115222296727e-111 Fibrillarin
DictyBase DDB_G0269878 2.998733531465523e-108 fbl on chromosome: 1 position
3783828 to 3785196
SGD YDL014W 1.999745369828301e-106 NOP1 Nucleolar protein, compon
ent of the small subunit proce
ssome complex, which is requir
ed for processing of pre-18S r
RNA; has similarity to mammali
an fibrillarin
Stentor Coeruleus SteCoe_34908 3.392270193026015e-47
General Information
No Data fetched for General Information
Associated Literature
- Ref:9201715: David E, McNeil JB, Basile V, Pearlman RE (1997) An unusual fibrillarin gene and protein: structure and functional implications. Molecular biology of the cell 8(6):1051-61
Sequences
>TTHERM_00138080(protein)
MGKDFKSGGGNAGGKPFNKGPGGPGGRPFNKGPGGPGGPGGKFGGGRPGGPGGKFGAKGP
RGPKTIIVKHRLEGVFICKGQQEALVTKNFFPGESVYNEKRMSVEENGEKIEYRVWNPYR
SKIAAAVVGGISDIHIKPGSKVLYLGGASGTTVSHVADIVGPTGVVYAVEFSHRSGRDLV
NMAKKRTNVVPIIGDARKPQEYRFLVGMVDVVFADVAQPDQARIMGMNCQYFLKNGGHFL
ISIKACCIDSTNEPAVVFAAEVQKLKEEGLKPEQQLTLEPYERDHAMVLGSYRA>TTHERM_00138080(coding)
ATGGGTAAAGATTTCAAGTCAGGTGGTGGCAATGCTGGTGGAAAGCCCTTCAATAAAGGT
CCTGGAGGTCCTGGTGGAAGACCCTTCAATAAGGGTCCTGGTGGTCCCGGTGGTCCTGGT
GGCAAATTCGGTGGTGGCAGACCCGGTGGCCCTGGTGGCAAATTTGGTGCCAAGGGTCCT
AGAGGTCCCAAGACTATTATTGTTAAGCATAGATTAGAAGGTGTTTTCATCTGCAAAGGT
CAATAAGAAGCTTTGGTAACTAAAAATTTCTTCCCTGGTGAATCTGTTTACAATGAAAAA
CGTATGTCCGTTGAAGAAAACGGTGAAAAGATTGAATATCGTGTCTGGAATCCCTACAGA
TCTAAAATTGCTGCTGCTGTTGTTGGTGGTATTTCTGATATTCATATTAAACCTGGCTCC
AAGGTTCTCTATTTGGGTGGTGCCTCTGGTACAACTGTCTCTCACGTTGCTGATATTGTT
GGACCCACTGGTGTTGTCTATGCTGTCGAATTCTCTCACAGAAGTGGTAGAGATTTGGTA
AATATGGCTAAGAAGAGAACCAATGTTGTTCCCATTATCGGTGATGCTAGAAAGCCCCAA
GAATACAGATTCTTAGTCGGTATGGTCGATGTCGTCTTCGCTGATGTTGCCCAACCTGAT
CAAGCTAGAATTATGGGTATGAACTGTTAATACTTCTTAAAGAATGGTGGTCACTTCCTT
ATCTCCATTAAGGCTTGCTGTATTGATTCAACCAACGAACCTGCAGTCGTTTTCGCTGCT
GAAGTACAAAAATTAAAAGAAGAAGGTCTCAAGCCTGAATAATAACTTACTCTTGAACCT
TATGAAAGAGATCACGCTATGGTCCTCGGTTCTTACAGAGCTTGA>TTHERM_00138080(gene)
ATGGGTAAAGATTTCAAGTCAGGTGGTGGCAATGCTGGTGGAAAGCCCTTCAATAAAGGT
CCTGGAGGTCCTGGTGGAAGACCCTTCAATAAGGGTCCTGGTGGTCCCGGTGGTCCTGGT
GGCAAATTCGGTGGTGGCAGACCCGGTGGCCCTGGTGGCAAATTTGGTGCCAAGGGTCCT
AGAGGTCCCAAGACTATTATTGTTAAGCATAGATTAGAAGGTGTTTTCATCTGCAAAGGT
CAATAAGAAGCTTTGGTAACTAAAAATTTCTTCCCTGGTGAATCTGTTTACAATGAAAAA
CGTATGTCCGTTGAAGAAAACGGTGAAAAGATTGAATATCGTGTCTGGAATCCCTACAGA
TCTAAAATTGCTGCTGCTGTTGTTGGTGGTATTTCTGATATTCATATTAAACCTGGCTCC
AAGGTTCTCTATTTGGGTATATATTTTAATTCTTTTCAATTAATTGATACAGCTTTGAAT
AGTTTGCATACAGCAAGGCTGTTTAAAAACAAAAATGCTAGATACTAATCAGATGGTTGA
CTTTAAAATATAATCAACTCAATCAATTATTGCAAAATATTAAAAAAGATTGATAGATAG
AAAGTATGTATGTATGTATGGGATACTCTACTTAAAATAAAATAAGTATTTGTTATACAA
ATATAAAGTAGGATTAATTCAATGCAGATAGATAGTTAGCATTTGCAAAAATATAAAATC
CCATAATGAAAATTGTAGCTGATTGTATTGAATAAATAAATACATTTCTATCTACAATAA
AAAGCATTTGAAAGATATATTTATCTTACAACATATACTACTAATATATAAATCGATAAA
TGAATGAATAAATAAATAGAATTTTTAAATTTTGCTTTAATCAATAATCCATATAAAATT
TACGCTGCTATTCTAAATAAATAAGTCAATAGCAATTAATTTTACTAAAATAAAATTTAT
TTTAGGATATTTTTATAACAAACAAACAAAGAAAGAATGATGGTTAAATTCATAGAGATT
TATATCTGAATTTATTTAACATCGATTATATCATTTAATTTCAATCAATTGAGTTAAAAA
TCTCTCATGAATAATGATATATTTTATAAACTTACTTATTTCTTTATTTTTAAGATGTAG
AAATAATTAATTCCCATCGATAATATAATAGAATCATCTAGCAAAATTTTTATTTAAACA
CATATTAAATTAAATTAATTATAAATAGGTGGTGCCTCTGGTACAACTGTCTCTCACGTT
GCTGATATTGTTGGACCCACTGGTGTTGTCTATGCTGTCGAATTCTCTCACAGAAGTGGT
AGAGATTTGGTAAATATGGCTAAGAAGAGAACCAATGTTGTTCCCATTATCGGTGATGCT
AGAAAGCCCCAAGAATACAGATTCTTAGTCGGTATGGTCGATGTCGTCTTCGCTGATGTT
GCCCAACCTGATCAAGCTAGAATTATGGGTATGAACTGTTAATACTTCTTAAAGAATGGT
GGTCACTTCCTTATCTCCATTAAGGCTTGCTGTATTGATTCAACCAACGAACCTGCAGTC
GTTTTCGCTGCTGAAGTACAAAAATTAAAAGAAGAAGGTCTCAAGCCTGAATAATAACTT
ACTCTTGAACCTTATGAAAGAGATCACGCTATGGTCCTCGGTTCTTACAGAGCTTGA