Identifiers and Description

Gene Model Identifier

TTHERM_00322910

Standard Name

EMG1 (EMG1 nucleolar protein homolog)

Aliases

PreTt16010 | 32.m00254 | NEP1

Description

ribosomal RNA small subunit methyltransferase

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• nucleus (IEA) | GO:0005634

Domains

• ( PF03587 ) Nep1 ribosome biogenesis protein
• ( PF08597 ) Translation initiation factor eIF3 subunit

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.6%

TetraMine Data

TTHERM_00322910

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_10057.1	4.999288603441066e-168	suppressor Mra1 family protein (301 aa)
Oxytricha	Contig11355.0.g92	1.9998099689916736e-77	EMG1/NEP1 methyltransferase
SGD	YLR186W	4.998338612125368e-60	EMG1 Member of the alpha/beta knot fold methyltransferase su perfamily; required for matura tion of 18S rRNA and for 40S r ibosome production; interacts with RNA and with S-adenosylme thionine; associates with spin dle/microtubules; forms homodi mers
WormBase	WBGene00012652	6.9972728945133496e-59	Ribosomal RNA small subunit me thyltransferase nep-1 status :Confirmed UniProt:Q9XX15 protein_id:CAA21025.1
DictyBase	DDB_G0272732	3.998097515166115e-39	emg1 on chromosome: 2 position 2220282 to 2221393
Stentor Coeruleus	SteCoe_27365	1.7587922024243116e-25

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00322910(coding)
ATGTCAGGCAGAGATAGAAAGTTTAACAATAACAAGAGAAAATAAAACTTCAATGATATG
AAGAAGAAGAAATAGAAATAAGTCAAAGAAGATTAATACGATGAAGAAGAAGAAGAAGTA
GAAGCTCAAGATTTATTACAAGACTAAGACGAATCTGACAATGATGTTGATTTAAAAAAA
GCAACCACTTCTTCTAAGGCTGAAGAAAAAGATGAAGCTGAAAAAGAAAGTGAATAAAAA
GCCACTGAAGCAGAAGAAGATAATGAAGATTTCTTAACAAAGGATGATGTATAAGATAAA
CGTAAAGTCTACGTAATTCTTGAAAAGTGTCCTTTAGAAACAGCCAAGTTAGGAAAAGAT
TTTGTTTTATTGAATTCTGATGAACACAAGGGTTATATTTCTAAGAAATTGAAGAAAGAT
TTCTCAACATACAGACCCGATATTGTTCATCACTCTTTGCTTTCTTTGATGGACTCTCCT
TTAAATAAAGCTGGCTTATTGCAAGTTTACATTCACACTGAAAATAATGTTTTAATATAT
ATTTCTCCTAACACTAAAATCCCAAGAACTTATAAGAGATTTGCAGCTCTTTTCGCATAA
TTGCTCACAAAATTGAAGGTTAGAGCTGTATAAAGCAGTGAAACTTTACTTAAAATCGTT
AAAAATCCTGTTACTCAACATCTCCCTTCAGATGCCATGAAAATTGGTATGTCTACCTAA
GCCCGTTTAGTAAGTTTTAAGGAATACATCGAAAAGTTACCTAAAAACAAGCCCGTAGTT
TATATTGTTGGTGGTGTTAGCAAAGGTAACCCTGCTATGGAAGTTGACTATGCTGATGAG
CACATCTGTATTTCAAAATACGGTCTTTCAGCCGGTTACTGCATATCCAGAATGATGAAC
TGCTATGAATAGATGTGGAATATCAATTGA

>TTHERM_00322910(protein)
MSGRDRKFNNNKRKQNFNDMKKKKQKQVKEDQYDEEEEEVEAQDLLQDQDESDNDVDLKK
ATTSSKAEEKDEAEKESEQKATEAEEDNEDFLTKDDVQDKRKVYVILEKCPLETAKLGKD
FVLLNSDEHKGYISKKLKKDFSTYRPDIVHHSLLSLMDSPLNKAGLLQVYIHTENNVLIY
ISPNTKIPRTYKRFAALFAQLLTKLKVRAVQSSETLLKIVKNPVTQHLPSDAMKIGMSTQ
ARLVSFKEYIEKLPKNKPVVYIVGGVSKGNPAMEVDYADEHICISKYGLSAGYCISRMMN
CYEQMWNIN

>TTHERM_00322910(gene)
ATGTCAGGCAGAGATAGAAAGTTTAACAATAACAAGAGAAAATAAAACTTCAATGATATG
AAGAAGAAGAAATAGAAATAAGTCAAAGAAGATTAATACGATGAAGAAGAAGAAGAAGTA
GAAGCTCAAGATTTATTACAAGACTAAGACGAATCTGACAATGATGTTGATTTAAAAAAA
GCAACCACTTCTTCTAAGGCTGAAGAAAAAGATGAAGCTGAAAAAGAAAGTGAATAAAAA
GCCACTGAAGCAGAAGAAGATAATGAAGATTTCTTAACAAAGGATGATGTATAAGATAAA
CGTAAAGTCTACGTAATTCTTGAAAAGTGTCCTTTAGAAACAGCCAAGTTAGGAAAAGAT
TTTGTTTTATTGAATTCTGATGAACACAAGGGTTATATTTCTAAGAAATTGAAGAAAGAT
TTCTCAACATACAGACCCGATATTGTTCATCACTCTTTGCTTTCTTTGATGGACTCTCCT
TTAAATAAAGCTGGCTTATTGCAAGTTTACATTCACACTGAAAATAATGTTTTAATATAT
ATTTCTCCTAACACTAAAATCCCAAGAACTTATAAGAGATTTGCAGCTCTTTTCGCATAA
TTGCTCACAAAATTGAAGGTTAGAGCTGTATAAAGCAGTGAAACTTTACTTAAAATCGTT
AAAAATCCTGTTACTCAACATCTCCCTTCAGATGCCATGAAAATTGGTATGTCTACCTAA
GCCCGTTTAGTAAGTTTTAAGGAATACATCGAAAAGTTACCTAAAAACAAGCCCGTAGTT
TATATTGTTGGTGGTGTTAGCAAAGGTAACCCTGCTATGGAAGTTGACTATGCTGATGAG
CACATCTGTATTTCAAAATACGGTCTTTCAGCCGGTTACTGCATATCCAGAATGATGAAC
TGCTATGAATAGATGTGGAATATCAATTGA