Identifiers and Description

Gene Model Identifier

TTHERM_00419730

Standard Name

DRH38 (DExD/H box RNA helicase 38)

Aliases

PreTt07103 | 46.m00158 | 3679.m00008

Description

DRH38 DEAH-box nuclear pre-mRNA splicing factor

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Molecular Function

• helicase activity (IEA) | GO:0004386
• nucleic acid binding (IEA) | GO:0003676
• ATP binding (IEA) | GO:0005524

Domains

• ( PF00270 ) DEAD/DEAH box helicase
• ( TIGR01967 ) ATP-dependent helicase HrpA
• ( TIGR01970 ) ATP-dependent helicase HrpB
• ( PF04408 ) Helicase associated domain (HA2)
• ( TIGR01587 ) CRISPR-associated helicase Cas3
• ( PF00271 ) Helicase conserved C-terminal domain
• ( PF07717 ) Domain of unknown function (DUF1605)

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 21.5%

TetraMine Data

TTHERM_00419730

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Stentor Coeruleus	SteCoe_525	0
Tetrahymena borealis	EI9_11089.1	9.997093137033517e-262	hypothetical protein (783 aa)
Oxytricha	Contig17487.0.g99	9.997093137033517e-262	Helicase associated domain (HA 2)
SGD	YER013W	2.0005951135209932e-158	PRP22 DEAH-box RNA-dependent A TPase/ATP-dependent RNA helica se, associates with lariat int ermediates before the second c atalytic step of splicing; med iates ATP-dependent mRNA relea se from the spliceosome and un winds RNA duplexes
DictyBase	DDB_G0291183	9.998596099208102e-158	dhx8 on chromosome: 5 position 5107365 to 5110847
WormBase	WBGene00018967	4.000899569014317e-153	locus:ddx-15 status:Confirme d UniProt:G8JY03 protein_i d:CCD63139.1

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00419730(coding)
ATGTGTTAGAGTTAATATAATTAATAAACAAATTAATTGGTAATTATTGTATTTATTATT
GGTATTGATAAAATGGACCCTTCCTAAAGTATAGAAGATTTTAGGAATAGTTTACCAATT
ACTGAACATAAACAAAAGATTATTGAAATAGTAAAGAATAATTTATTTTGTGTTATTACT
GGTGATACTGGTTCTGGTAAATCTACTCAGCTACCTCAATATATTTTAGATTCATAGGAG
ATTTTAGATGTGCTTAAAGAAAATTAGAAAAAATATGATTTGTAAAACAATAAAAAGTCT
AAGCTTAACCATTTGCATGAAGATAACAAAGTGAGTGTAGTAATTACATAGCCTAGAAGA
GTTGCAGCTATATCGATGGCTAAAAGAATATGTTATGAGAGAAATGTAAGCTTAGGAGAT
GATGTAGGATATACTATTAGATTTGATGATAAAACTTCTTCAAAGACTCATTTAAAATAT
ATGACTGATGGTATCCTTGTCAGAGAATGTCTGCAAGATGATACTCTCAGTAAATATAAT
GTTGTTATATTGGATGAGGCTCACGAAAGAAGTCTGTATACTGATGTTCTTTTTGCTTTA
ATCAAATAGGCTGTAAAAAAAAGATAAGGTTCCTTAAAGTTAATTGTCACATCTGCCACT
CTAAACACTGATTAATTTTCAAAGTTTTTTGATAATTGCCCTGTACTTTCTATGAAAGGA
AAGCTTTATAATGTGGAAGTTAGATACAAGCCTATTTTAATGAATTTGAGGATTGAGGAA
AGTATAAACATTATAATGAAAATTCATTTAAATGAAGGTCCTGGCGATATATTAGTTTTC
TTAACTGGATCAGAAGAATGTGAAATAGCAAAGAATTAATGTATAGAGAGGTTATAAAAA
GATTTAGAGAATGGAGTTGAGTTAGCAGGCATGATGATATTTTCACTTTATGGATCATTA
GGTTCAGAAGACTAGCAATAAATATTTATGAAAACTCCTGAAAATTGCAGAAAAGTAGTG
TTTTCAACAAACATAGCAGAAACATCTCTTACTATTGATAACATAGGATTTGTAATAGAT
TGTGGATATGTAAAATAAAAGTGCTATAACCCAAGGACAGGTATGGATGCTTTGATAGTA
GTTCCTATTTCATAAGTTCAAGCAGTGTAAAGAACTGGTAGAGCTGGTAGAACATAAGAA
GGTCTTTGTTTTAGACTTTACAGTAAAAAATTTTATGATGAAGACATGAAACCACATACA
GTGCCAGAAATAAAAAGAGTTTCATTGAATAGTGTTGTCTTAACATTAAAGAGTATGGGA
ATACATGATGTAATTAATTTTGATTATATGGAACACCCTGATAGAGAGCAGTTGCTTCAA
GCATTGAAATAACTTTATTTTCTACAGGCTATAGAACAAGATGGAAGAATTACAGATTTG
GGTAAAGAAATGAATAAATTTCCTTTAGAGCCATCCTATGCTAAGTCTCTTCTTACTAGC
TATATGCTCCGTTGCGAAGATGAAATGATAACTTTAGTTGCTTTGCTCTCATCTGAGCAA
ATTTGGAGTAAACCATCAAGAGTTAGAGCATAAGATTATGAAAGGTTTGAAGAATGTTTA
AAAAGATTTGCTGATCCAGACGGAGATCACTTTAGTCTATTAAATATTTACTATTCATGG
AAGAGAAATAAGTGCTCAGATGGGTATGCTAAATCAAACTTCTTTAACATAAGAGCCTTG
AAATAAGGAGAGAATATCAAAATATAAATAAATGACTTAATAAAGAATATTGATAAAGAT
GTTTTAAAAAAATTCTATAAAGAAGATTCTATGTATTTATATTATAAAGAAAATAGAGAA
AAAAAAGATTCAGATTCTAAAAGCAAAAGTAACTCTTAAAAAAAGGAAGATAAATATAAT
GAAAAATTTGATCAAAAAAATTAAAAATAATAAAATCCTGTCTTGACTCAATCTGATATC
TTTAGGTTAGCCTTAGCTAGCGGCTTTTATTATAATAGTGCTAGAAAAGTTTAAAATAGC
ACTGATAGTTATTTGCTTATATATCCAGAAGGAAATGTTGTTGATATAGACCCTCAATCA
GTTTATTCAATAACTTAAAATTATCCTCCTCATGTAATTTTTACAGAACTGGGTGGTACG
AATCAAGTTAGAGGAGTTATGAGATACGTTTCATAGATAGATCCCTTTTGGGTTTCGCCG
TATATACCCATGATAAAGAATGTAAATGCTAAAAGATTAGCGGGATTAGATTAGAATCAA
AATAAATAAGAAATAATTTAGAAGAAAAAAACAGATGAAGAAATATAAAAAGAGAAGTAA
GATAGAATATAAGAAATAGAAGAGAAAAAAAAATAAGCCTTAGCTCGTTTGAATGAGCGC
AAAAAATTATAAAAAAATTGA

>TTHERM_00419730(protein)
MCQSQYNQQTNQLVIIVFIIGIDKMDPSQSIEDFRNSLPITEHKQKIIEIVKNNLFCVIT
GDTGSGKSTQLPQYILDSQEILDVLKENQKKYDLQNNKKSKLNHLHEDNKVSVVITQPRR
VAAISMAKRICYERNVSLGDDVGYTIRFDDKTSSKTHLKYMTDGILVRECLQDDTLSKYN
VVILDEAHERSLYTDVLFALIKQAVKKRQGSLKLIVTSATLNTDQFSKFFDNCPVLSMKG
KLYNVEVRYKPILMNLRIEESINIIMKIHLNEGPGDILVFLTGSEECEIAKNQCIERLQK
DLENGVELAGMMIFSLYGSLGSEDQQQIFMKTPENCRKVVFSTNIAETSLTIDNIGFVID
CGYVKQKCYNPRTGMDALIVVPISQVQAVQRTGRAGRTQEGLCFRLYSKKFYDEDMKPHT
VPEIKRVSLNSVVLTLKSMGIHDVINFDYMEHPDREQLLQALKQLYFLQAIEQDGRITDL
GKEMNKFPLEPSYAKSLLTSYMLRCEDEMITLVALLSSEQIWSKPSRVRAQDYERFEECL
KRFADPDGDHFSLLNIYYSWKRNKCSDGYAKSNFFNIRALKQGENIKIQINDLIKNIDKD
VLKKFYKEDSMYLYYKENREKKDSDSKSKSNSQKKEDKYNEKFDQKNQKQQNPVLTQSDI
FRLALASGFYYNSARKVQNSTDSYLLIYPEGNVVDIDPQSVYSITQNYPPHVIFTELGGT
NQVRGVMRYVSQIDPFWVSPYIPMIKNVNAKRLAGLDQNQNKQEIIQKKKTDEEIQKEKQ
DRIQEIEEKKKQALARLNERKKLQKN

>TTHERM_00419730(gene)
ATGTGTTAGGTATTTTCGTAATAATTTACCAATTTTCTAAATTATATTAATAAATATTTT
ATTTTAATGAAACATGTTTGGAACTCTTATAAATAATATACTCGAATTATAAATTATTAA
TAAACTTTAAACTCAAATGTTACCAAAATTAAATATAAAAATTTCTAAAATGAATTAAAT
AAATAAATAAATAATTCAAAATAATTTTTTTGTTAAATTATTTTAATTTGAAAAAATATT
ATTTTAAAATTTCATTGTGTTATTGCTATGATATGCATTAGAAGAAACTATAATATCTAG
ACAAAGAGTTAATATAATTAATAAACAAATTAATTGGTAATTATTGTATTTATTATTGGT
ATTGATAAAATGGACCCTTCCTAAAGTATAGAAGATTTTAGGAATAGTTTACCAATTACT
GAACATAAACAAAAGATTATTGAAATAGTAAAGAATAATTTATTTTGTGTTATTACTGGT
GATACTGGTTCTGGTAAATCTACTCAGCTACCTCAATATATTTTAGATTCATAGGAGATT
TTAGATGTGCTTAAAGAAAATTAGAAAAAATATGATTTGTAAAACAATAAAAAGTCTAAG
CTTAACCATTTGCATGAAGATAACAAAGTGAGTGTAGTAATTACATAGCCTAGAAGAGTT
GCAGCTATATCGATGGCTAAAAGAATATGTTATGAGAGAAATGTAAGCTTAGGAGATGAT
GTAGGATATACTATTAGATTTGATGATAAAACTTCTTCAAAGACTCATTTAAAATATATG
ACTGATGGTATCCTTGTCAGAGAATGTCTGCAAGATGATACTCTCAGTAAATATAATGTT
GTTATATTGGATGAGGCTCACGAAAGAAGTCTGTATACTGATGTTCTTTTTGCTTTAATC
AAATAGGCTGTAAAAAAAAGATAAGGTTCCTTAAAGTTAATTGTCACATCTGCCACTCTA
AACACTGATTAATTTTCAAAGTTTTTTGATAATTGCCCTGTACTTTCTATGAAAGGAAAG
CTTTATAATGTGGAAGTTAGATACAAGCCTATTTTAATGAATTTGAGGATTGAGGAAAGT
ATAAACATTATAATGAAAATTCATTTAAATGAAGGTCCTGGCGATATATTAGTTTTCTTA
ACTGGATCAGAAGAATGTGAAATAGCAAAGAATTAATGTATAGAGAGGTTATAAAAAGAT
TTAGAGAATGGAGTTGAGTTAGCAGGCATGATGATATTTTCACTTTATGGATCATTAGGT
TCAGAAGACTAGCAATAAATATTTATGAAAACTCCTGAAAATTGCAGAAAAGTAGTGTTT
TCAACAAACATAGCAGAAACATCTCTTACTATTGATAACATAGGATTTGTAATAGATTGT
GGATATGTAAAATAAAAGTGCTATAACCCAAGGACAGGTATGGATGCTTTGATAGTAGTT
CCTATTTCATAAGTTCAAGCAGTGTAAAGAACTGGTAGAGCTGGTAGAACATAAGAAGGT
CTTTGTTTTAGACTTTACAGTAAAAAATTTTATGATGAAGACATGAAACCACATACAGTG
CCAGAAATAAAAAGAGTTTCATTGAATAGTGTTGTCTTAACATTAAAGGTAAATAAATAA
ATATTTTTAAAATATTTTATTTATTGGTTGGATAAGTTTAATAATTATTTTTATTTAATT
TATTAGAGTATGGGAATACATGATGTAATTAATTTTGATTATATGGAACACCCTGATAGA
GAGCAGTTGCTTCAAGCATTGAAATAACTTTATTTTCTACAGGCTATAGAACAAGATGGA
AGAATTACAGATTTGGGTAAAGAAATGAATAAATTTCCTTTAGAGCCATCCTATGCTAAG
TCTCTTCTTACTAGCTATATGCTCCGTTGCGAAGATGAAATGATAACTTTAGTTGCTTTG
CTCTCATCTGAGCAAATTTGGAGTAAACCATCAAGAGTTAGAGCATAAGATTATGAAAGG
TTTGAAGAATGTTTAAAAAGATTTGCTGATCCAGACGGAGATCACTTTAGTCTATTAAAT
ATTTACTATTCATGGAAGAGAAATAAGTGCTCAGATGGGTATGCTAAATCAAACTTCTTT
AACATAAGAGCCTTGAAATAAGGAGAGAATATCAAAATATAAATAAATGACTTAATAAAG
AATATTGATAAAGATGTTTTAAAAAAATTCTATAAAGAAGATTCTATGTATTTATATTAT
AAAGAAAATAGAGAAAAAAAAGATTCAGATTCTAAAAGCAAAAGTAACTCTTAAAAAAAG
GAAGATAAATATAATGAAAAATTTGATCAAAAAAATTAAAAATAATAAAATCCTGTCTTG
ACTCAATCTGATATCTTTAGGTTAGCCTTAGCTAGCGGCTTTTATTATAATAGTGCTAGA
AAAGTTTAAAATAGCACTGATAGTTATTTGCTTATATATCCAGAAGGAAATGTTGTTGAT
ATAGACCCTCAATCAGTTTATTCAATAACTTAAAATTATCCTCCTCATGTAATTTTTACA
GAACTGGGTGGTACGAATCAAGTTAGAGGAGTTATGAGATACGTTTCATAGATAGATCCC
TTTTGGGTTTCGCCGTATATACCCATGATAAAGAATGTAAATGCTAAAAGATTAGCGGGA
TTAGATTAGAATCAAAATAAATAAGAAATAATTTAGAAGAAAAAAACAGATGAAGAAATA
TAAAAAGAGAAGTAAGATAGAATATAAGAAATAGAAGAGAAAAAAAAATAAGCCTTAGCT
CGTTTGAATGAGCGCAAAAAATTATAAAAAAATTGA