Identifiers and Description

Gene Model Identifier

TTHERM_00316680

Standard Name

DRH28 (DExD/H box RNA helicase 28)

Aliases

PreTt20979 | 31.m00281 | 3687.m00083

Description

DEAD/DEAH box helicase family protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Molecular Function

• nucleic acid binding (IEA) | GO:0003676
• ATP-dependent helicase activity (IEA) | GO:0008026
• ATP binding (IEA) | GO:0005524
• helicase activity (IEA) | GO:0004386

Domains

• ( PF00270 ) DEAD/DEAH box helicase
• ( TIGR01389 ) ATP-dependent DNA helicase RecQ
• ( TIGR01587 ) CRISPR-associated helicase Cas3
• ( PF00271 ) Helicase conserved C-terminal domain
• ( PF04851 ) type III restriction enzyme, res
• ( TIGR00614 ) ATP-dependent DNA helicase, RecQ family

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.2%

TetraMine Data

TTHERM_00316680

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_08406.1	9.997093137033517e-262	DEAD/DEAH box helicase (611 aa )
Oxytricha	Contig240.1.g137	2.9985100291019436e-113	DEAD/DEAH box helicase
SGD	YFL002C	1.9994050701445255e-104	SPB4 Putative ATP-dependent RN A helicase, nucleolar protein required for synthesis of 60S ribosomal subunits at a late s tep in the pathway; sediments with 66S pre-ribosomes in sucr ose gradients
DictyBase	DDB_G0291588	3.000712232670428e-104	ddx55 on chromosome: 6 positio n 577637 to 579628
WormBase	WBGene00013983	9.000840820639671e-86	Probable ATP-dependent RNA hel icase DDX55 homolog status:P artially_confirmed UniProt:P 34640 protein_id:CAA80151.1
Stentor Coeruleus	SteCoe_5849	7.175095973164411e-66

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00316680(coding)
ATGAATACATTAAAGTAGAAATGGGAGGATTTAGAGACAAGACTCTTCCCTTAGGTTGAA
AAATGTGTCAAAGACGCTTTAGGCTATGAAACTATGATGCCTGTTTAGAAAGCTACAATC
CCATTATTTATCAAAAACCATGATTTAGCAGTAGAAGCATAAACTGGAAGTGGCAAAACA
TTAGCATTTTTGCTTCCTATCTTTAATGTTTTGATAAAGCAAGTAAAAACAGCAAATAAA
AATTGTGTTTATGCATTAGTTATTGCTCCTACTAGAGAGTTAGCAAAATAAATTCATGAA
ATAGCTGTTTAGTTAGCGAGTCATTTAGAAAATAATTAATTCAGCATTCAACTTTGTATA
GGTGGTGTAAGCACTAAAATAGATGTATCTAATATTCAGTCATAAGGTGCTAACATTTTA
ATTGCCACTCCTGGTAAACTCAAAGAGCTGATGGATATGAAAGAGTTAGAAGATAGTTTA
ATTTTTAGGAATCTTGAAATATTGATTATGGATGAAGCAGATAGATTAATGGATACAGAG
TATTATGAAGATATGACCTATGCATTAGAAAAGCTTCCAAAATAAAGAAGAACAGGCTTG
TTTTCAGCAACTTTGAGCTCTGCAAAATTAAGTGAATTGATTAAATACGGTCTCCGTAAC
CCAGTTAAAGTTTCAGTCAAACCTGGTGGTGAAAAAGCTAATAACACTAATTATGTTGTT
CCTTCCACCCTAGAAAACTCTTACTTGATTCTTGACAATAGATTTTAAAAGATAGCATTT
ATGCTTAATTTCATTTTAAAGTATCCTGAAGAGAAAACTATCCTTTTCTTAAATACTTGT
GCAAGTGTTGACTTTTACTAAAAAATTTTCAAAATGTACAGCTTAATTAAAAAAATACAA
ATTACTTCTGTGCATGGATAAATGAAATAAGTTAAAAGAAATAAAATTATTGAAAACTTT
ACAAAGAGCTAAAAGGGAGTCTTAATTTGTACAGATGTTGTTGCAAGAGGTATAGATTTC
TAAGATGTCCACCATATTTTATAAATAGATCCTCCATAAGATCCAAGTTTTTACATTCAT
AGAATAGGTAGAACAGCTAGAAAGGGAAAATCAGGAAAGGCTATTATACTCATTGAAAAA
CATGAAGAGGCATTTGTAGAATTTCTAAGAATTAAAAATGTTGAGATTCAGGAATACAAT
AATTCTGAATAAATAGAATGTGATCCCCTAAAATTTGAAGAAGATATTAAAAAAATAATG
ATATAAGATAGAGATAATATAGAAAAATCTAAAAAAGCATTTATTTCTTATATTAGGTCT
TACATGGAACATGATCTTAAGTATATATTTGAATTCAAAGATTTAGACATAGGTTGGGTG
GCTCGCTCATTCTTTTTATTGAGACTGCCTCGTATTAAGGAAATTCTCAGCAAACATATA
AAGAATTTTCATTAAAGCGAAATTGATCCAGACACTATACCATTTTAAGATAAAAATTAA
GAACAATAGTTTTCTCTTAAATAAGAAGAAAGAACATAAAAAAGATAAGAAAGAGAAGAG
CATGCAGAAAAGCAATAAAAATAATTAGAGAAAAAGTAAAAAGAAAAGAATATGCGTTAG
GTGAGAAGAAAATAAAAAAGGGAAGTATTAGAAGAAGAATAAGATGAATTTTCCTTGGAA
TTAAACTTAGCAAAGAAGCTAAAATAGGGTAAAATTACTCTTTAGGAATATAAAAAACGT
ATGAAAGAAATAGATCCTGAAGATTTACATGATGTTGAATTTACTAAGAAATAAATAGTA
TCAATTTCAGGTCATAAGAAGAAGAAGAAATGA

>TTHERM_00316680(protein)
MNTLKQKWEDLETRLFPQVEKCVKDALGYETMMPVQKATIPLFIKNHDLAVEAQTGSGKT
LAFLLPIFNVLIKQVKTANKNCVYALVIAPTRELAKQIHEIAVQLASHLENNQFSIQLCI
GGVSTKIDVSNIQSQGANILIATPGKLKELMDMKELEDSLIFRNLEILIMDEADRLMDTE
YYEDMTYALEKLPKQRRTGLFSATLSSAKLSELIKYGLRNPVKVSVKPGGEKANNTNYVV
PSTLENSYLILDNRFQKIAFMLNFILKYPEEKTILFLNTCASVDFYQKIFKMYSLIKKIQ
ITSVHGQMKQVKRNKIIENFTKSQKGVLICTDVVARGIDFQDVHHILQIDPPQDPSFYIH
RIGRTARKGKSGKAIILIEKHEEAFVEFLRIKNVEIQEYNNSEQIECDPLKFEEDIKKIM
IQDRDNIEKSKKAFISYIRSYMEHDLKYIFEFKDLDIGWVARSFFLLRLPRIKEILSKHI
KNFHQSEIDPDTIPFQDKNQEQQFSLKQEERTQKRQEREEHAEKQQKQLEKKQKEKNMRQ
VRRKQKREVLEEEQDEFSLELNLAKKLKQGKITLQEYKKRMKEIDPEDLHDVEFTKKQIV
SISGHKKKKK

>TTHERM_00316680(gene)
ATGAATACATTAAAGTAGAAATGGGAGGATTTAGAGACAAGACTCTTCCCTTAGGTTGAA
AAATGTGTCAAAGACGCTTTAGGCTATGAAACTATGATGCCTGTTTAGAAAGCTACAATC
CCATTATTTATCAAAAACCATGATTTAGCAGTAGAAGCATAAACTGGAAGTGGCAAAACA
TTAGCATTTTTGCTTCCTATCTTTAATGTTTTGATAAAGCAAGTAAAAACAGCAAATAAA
AATTGTGTTTATGCATTAGTTATTGCTCCTACTAGAGAGTTAGCAAAATAAATTCATGAA
ATAGCTGTTTAGTTAGCGAGTCATTTAGAAAATAATTAATTCAGCATTCAACTTTGTATA
GGTGGTGTAAGCACTAAAATAGATGTATCTAATATTCAGTCATAAGGTGCTAACATTTTA
ATTGCCACTCCTGGTAAACTCAAAGAGCTGATGGATATGAAAGAGTTAGAAGATAGTTTA
ATTTTTAGGAATCTTGAAATATTGATTATGGGTAATTTATTGTAATTATAAGGTTTTGAT
TTCTAGTATTTAATAGCAAAGGTTTCCTTGAAGCTATTTCAATAATAAAGCTAAATTTTG
AAGGTTTTATGCAATTTAGCAAAATAAATGTTAATATTAATGGATAAAAATAAATTTTGA
TTATAAAAATACTGGTTTTCTTTAATGATATGACTTTAATTTAAATAAAATTAATATTTT
ATAATGTTAAATTTTTTTTATTCTATAAAGATGAAGCAGATAGATTAATGGATACAGAGT
ATTATGAAGATATGACCTATGCATTAGAAAAGCTTCCAAAATAAAGAAGAACAGGCTTGT
TTTCAGCAACTTTGAGCTCTGCAAAATTAAGTGAATTGATTAAATACGGTCTCCGTAACC
CAGTTAAAGTTTCAGTCAAAGTATTTAAAACATTTTATGAAATTCGAAATTTTTGATTAT
TAAAATTAAAATTTTATATAAAGCCTGGTGGTGAAAAAGCTAATAACACTAATTATGTTG
TTCCTTCCACCCTAGAAAACTCTTACTTGATTCTTGACAATAGATTTTAAAAGATAGCAT
TTATGCTTAATTTCATTTTAAAGTATCCTGAAGAGAAAACTATCCTTTTCTTAAATACTT
GTGCAAGTGTTGACTTTTACTAAAAAATTTTCAAAATGTACAGCTTAATTAAAAAAATAC
AAATTACTTCTGTGCATGGATAAATGAAATAAGTTAAAAGAAATAAAATTATTGAAAACT
TTACAAAGAGCTAAAAGGGAGTCTTAATTTGTACAGATGTTGTTGCAAGAGGTATAGATT
TCTAAGATGTCCACCATATTTTATAAATAGATCCTCCATAAGTAATTTTTTAGTATTTGT
TAGTATTTGGTATTAAAGAATGTAAATTTTTAATAGGATCCAAGTTTTTACATTCATAGA
ATAGGTAGAACAGCTAGAAAGGGAAAATCAGGAAAGGTAAATAAATATTTAAATTTTATT
TAGTCTAAAAATTGATTAAATAGGCTATTATACTCATTGAAAAACATGAAGAGGCATTTG
TAGAATTTCTAAGAATTAAAAATGTAAATTATTACTTATAATTTAATTGTTTAAAATTAA
TTATTTTTGGGATAACTTTTAGGTTGAGATTCAGGAATACAATAATTCTGAATAAATAGA
ATGTGATCCCCTAAAATTTGAAGAAGATATTAAAAAAATAATGATATAAGATAGAGATAA
TATAGAAAAATCTAAAAAAGCATTTATTTCTTATATTAGGTCTTACATGGAACATGATGT
ATGTTAAATTAAATTGAAAGCAGTAATTAATAAAATAATTTTTTTACACAATAGCTTAAG
TATATATTTGAATTCAAAGATTTAGACATAGGTTGGGTGGCTCGCTCATTCTTTTTATTG
AGACTGCCTCGTATTAAGGAAATTCTCAGCAAACATATAAAGAATTTTCATTAAAGCGAA
ATTGATCCAGACACTATACCATTTTAAGATAAAAATTAAGAACAATAGTTTTCTCTTAAA
TAAGAAGAAAGAACATAAAAAAGTAAATTAAAGTAATCTTAAGAAATAACCTCAATGTTT
TTTTTAATTTTATAGGATAAGAAAGAGAAGAGCATGCAGAAAAGCAATAAAAATAATTAG
AGAAAAAGTAAAAAGAAAAGAATATGCGTTAGGTGAGAAGAAAATAAAAAAGGGAAGTAT
TAGAAGAAGAATAAGATGAATTTTCCTTGGAATTAAACTTAGCAAAGAAGCTAAAATAGG
GTAAAATTACTCTTTAGGAATATAAAAAACGTATGAAAGAAATAGATCCTGAAGATTTAC
ATGATGTTGAATTTACTAAGAAATAAATAGTATCAATTTCAGGTCATAAGAAGAAGAAGA
AATGA