Identifiers and Description

Gene Model Identifier

TTHERM_00444310

Standard Name

DRH20 (DExD/H box RNA helicase 20)

Aliases

PreTt03799 | 51.m00165 | 3704.m00020

Description

DExD/H box RNA helicase

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Molecular Function

• helicase activity (IEA) | GO:0004386
• RNA binding (IEA) | GO:0003723
• nucleic acid binding (IEA) | GO:0003676
• ATP binding (IEA) | GO:0005524

Domains

• ( PF00575 ) S1 RNA binding domain
• ( PF00270 ) DEAD/DEAH box helicase
• ( TIGR01967 ) ATP-dependent helicase HrpA
• ( TIGR01970 ) ATP-dependent helicase HrpB
• ( PF04408 ) Helicase associated domain (HA2)
• ( TIGR01587 ) CRISPR-associated helicase Cas3
• ( TIGR01622 ) splicing factor, CC1-like family
• ( PF04642 ) Protein of unknown function, DUF601
• ( PF00005 ) ABC transporter, ATP-binding protein
• ( PF00271 ) Helicase conserved C-terminal domain
• ( PF07717 ) Domain of unknown function (DUF1605)
• ( PF08648 ) Protein of unknown function (DUF1777)
• ( PF04851 ) type III restriction enzyme, res
• ( TIGR01642 ) U2 snRNP auxilliary factor, large

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 13.5%

TetraMine Data

TTHERM_00444310

WebApollo

Fullscreen View

Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Stentor Coeruleus	SteCoe_18422	0
WormBase	WBGene00003393	9.997093137033517e-262	locus:mog-5 Probable pre-mRN A-splicing factor ATP-dependen t RNA helicase mog-5 status: Confirmed UniProt:Q09530 p rotein_id:CCD68732.1
Tetrahymena borealis	EI9_10926.1	9.997093137033517e-262	ATP-dependent helicase DHX8, R NA helicase HRH1 (1308 aa)
DictyBase	DDB_G0291183	9.997093137033517e-262	dhx8 on chromosome: 5 position 5107365 to 5110847
Oxytricha	Contig13549.0.g40	9.997093137033517e-262	Oligonucleotide/oligosaccharid e-binding (OB)-fold
SGD	YER013W	9.997093137033517e-262	PRP22 DEAH-box RNA-dependent A TPase/ATP-dependent RNA helica se, associates with lariat int ermediates before the second c atalytic step of splicing; med iates ATP-dependent mRNA relea se from the spliceosome and un winds RNA duplexes

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00444310(coding)
ATGGCTTCTAATTTATAGTATGTCCTTCTCAGCTAGCAGGTTATGCAACAGCTGAAAACA
CAACTAGGAATTTAGGATAAAGATTTAGTAGATTATTTTATAGATTAAGCATTTGAATCA
GATACTGAGCAATAGTTTGCTGAAAATATTAAAGATGATGCAGAATTATCAGACTAATTT
ATTTCTAGTTTATATAAATTGATTAAGTCAAAGTAGAGCTTAATTAAACCGAAAGTTGAT
CTTCAAGCATAAAATAAATAACTTGAGGACAAGAAAAATAAATTTTCTGCAGGAGATCCA
TAAAAAATTGATATTGAAATCGAAAAAGAGGATATCAAGCAAAAAGAAAAGGTTAAAAGA
GATGAAAATTATGAAAATGAAGATAGTGATGAAGAATAGAATGAATTAAAAAGACAAGAA
CTAGAAAAGAGAAAGCAATATGCTAAAATTTTCCCAGCTCTTGCATAGAGAGATGAAATA
GATCTGGATTAACCTTAACCAGAGTAAAAAGTGGACAAAAATAGTAGTAAATTCGATCCA
AAGCCGACTAATATTGATGCAAGATAAGAAAAAGAAAAAGAGACTTCAAATAAAGAAATC
AGTAGAAAAAAAAGTAGCAAGCATTCAAGAAGCAGAAGCAAGTCTCATAAAAAGGAAAAA
AGTAAAAGAAGGTCTAGAAGTCGCTCATAAGGTAAAAGTAAGAAGAAATACTCTAGAAGT
AGGTCAAAAGAAAAAAAAAATCGCTCTTATTCAAAAGAAAAGAAAAGTCGTCGTTCACGC
TCTAAATCTCATGAAAAAAAGAAAAAAAGGGATTCCCCTGATGCAAAAAAAGATCATAGA
AAAAAATATTAGAGAGATTCGAATTCACCACTCAGAGAGAAAAAGGGTAGAGAAAATAGT
TCTCGCAGCAGATCATAAGAAAAGCAAACTCGTTAGCAATTCAAGAGATAAGAAGTTGAA
AAGGACTCAATTTTAGATGGAGTTGTTTCTAAAATAAGTGAATTTGGTTGTTTTGTAACA
TTAGAAAATGTTGGAGGGCGTAAAGAAGGTTTGGTTCACATTAGCTAGCTTTCAAGCAAA
AGAGTTGGAAATATTTAAGAAGTAGCGAGAATTGGATAAAGAGTAAAAGTAAAAGTAATA
AGTGTGATAGGAAACAAAATTAGTTTGAGTATGAAAGATGTTGATTAAATAACTGGTTTA
GATAAGTTTGAACAAAAAATACGATATGAGGAATCCTAATCTCTCAAGTATGACCCTCTT
GAGTAGAAAGAAAAGAAGGCATTTGGTGTGTTAGATAAAGATGATATTATCAAATCAAAT
TAAAATTCAAAGTTCGGTGCTCTAACAGGTATTCTACTTGAAGATAAAGAGGAAAAAAAT
AAAAAGAGAATCAGAGAAAGTTCTTAAGAAAAGTGGGAACGTAAGTAAGCAGAATACTAT
TCCAGTAAACATTTGGGTATTGATAAAGGCGAAATAGATTTAGATGAAGGTTGTTCAGAA
GATGAAGATGTTGAAGTTGAAATTCGTGAGAACGAAACTCCCTTCTTAAAAGATACGACA
ACAAAGGCAGGAGTAAACTTATCTCCTATTAGAGTTACTAAAAACTAGAATGGCTCTTTG
AGTAGACAAGCACTTAATGCAGTTTAACAAGCAAAAGATAGAAGAGAAATTCGTATTTAG
CAAAACAATGCTTTGGTAGATAGTATTAACAAATAAGAACTCTAAAAAATGAATTTAGAT
CCTACTGCAGAATCTATTTTCCTTTTAAGTAATTTAAAGAAGTTGGGAGATGCTTAAACA
TCGGAAATTCCAGAATTTAAAAAAGAAGCAATGTTTAAGGCTGCTCTCAACAACTCTAAC
AAACCAAAATAAACTATGACAATCAAGGAGTAAAAAGAATCTCTTCCTATCTATTAATAT
AAGGAATAACTTATCAAAGCTTGCATTAATAATTAAATTCTTATTGTTATTGGTGAAACC
GGTTCAGGAAAAACAACTTAAATGACATAGTATCTCTTAGAAGCAGGCTTTTGTAAGAGT
GGTAAGAAAATTGGGTGTACCTAACCTCGTCGTGTTGCAGCTATGAGTGTTGCTAAGCGT
GTTTCTGAAGAAATGGGTGTAGTACTTGGTGAAGAAGTAGGTTATTCAATACGTTTTGAA
GATTGTACATCTGCTTCTACAGTAATTAAATATATGACTGATGGTATGCTTCTTCGTGAG
GCCTTGCTTGACACAGAACTAAGCAACTACTCAGTTATTATGCTCGATGAAGCACATGAA
AGATAGCTAAATACAGATGTTCTTTTTGGTTTACTTAAGAAAGTAGCTAAGAAAAGAAAA
GATTTTCATTTGATTATTACTTCCGCTACCCTTGATGCTGCAAAATTCTCTAATTATTTC
TTTGATTGCTAAGTTTTCCGTGTACCAGGTCGTACCTTCAAAGTCGATGTCCTCTACTCT
GTAGAACCTGAATAGGATTATGTTGAAGCTTCTTTAATTGTAATCATGCAAATTCACTTG
CATGAACCTCCTGGCGATATTCTCCTTTTCTTAACAGGTCAAGAAGAAATTGATAATGCA
TGCTAAATATTATTCTAGCGTATGAAGAACTTAGGTCCAGATGCACCTGAACTTATTATA
TTACCTCTTTATGCTGGTTTGCCTAATGAACTATAGAATAGAATTTTCCTTCCTACTCCT
GAGGGAAAACGTAAATGTATTATATCAACTAATATTGCAGAAGCATCTCTTACCATCGAT
GGTATTTACTATGTCGTAGATCCAGGATTTGCAAAAATTAAAGTTTACAATCCAAAACTT
GGTATGGATTCCTTGATTGTTGCACCAATTTCATAGGCTTCAGCGAAATAACGTTAGGGT
CGTGCAGGTCGTACAGGTCCTGGTAAATGTTTCCGTCTTTATACTGAAGATGCTTTCAAA
AATGAAATGCTCCCAACAAGTATACCTGAAATTCAGCGTACAAACTTAGCAAACACGGTT
TTACTTTTAAAGGCAATGGGTATTAATGATTTAATCAACTTCGATTTTATGGATCCTCCT
CCTATTCAAACTTTGATTTCTGCTTTAGAACATCTTTACACTTTAGGTTGTTTGGATGAT
GAAGGTCTCCTTACACGTCTCGGTTTGAAAATGGCCGAATTTCCTTTAGAACCACCTCTC
TCTAAAATGCTTATAACAAGTGTTGATCTTGGATGTTCAGATGAAATAGCTACTATTATT
GCTATGTTGTCAGTTTAAAATGTATTTTTCTGTCCAAAAGATAAAAAATAACAAGCTGAC
CAGCGTCGTGCTAAATTTCATCATTAAGATGGAGACCACTTAACTCTTTTGACTGTATAC
GAAGCTTGGAAATCAAACAATTTTTCAAATATTTGGTGTCATGAGAATTTCATAGATTCT
AGAACAATAAAAAGAGCACAAGATATTCGTAAACAGTTGATAGGTATCATGGACCGCTAT
CATTTACCTGTTTAATCGTGTGGTAAAAATTATGCCAAAATCCGTAAGGCTATATGTGCA
GGCTTCTTTAATCATGCAGCAAAAAAAGATCGTAACGAAGGATACAAAACTATCATAGAT
AATCATACTGTTAACATACATCCTACATCTGCACTTTTTTAGAAGCAGCCGGATTGGGTA
GTTTATCACGAATTAGTTTTGACAACTAAAGAATATATGAGAAATATTTCCACAATAGAA
CCAAAGTGGCTTGTTGAAGTTGCACCGAATTTCTTTTAAAACGTAAACCCTCATGTATTA
TCAAAAGCTAAAAAGGCTGAAAAGCTTGAATCACTCTCAACTAAAAGTGGTGATAACGAA
GCTTGGCGTCTGTCTAAAAGAAGAGGAAATGGTTGA

>TTHERM_00444310(protein)
MASNLQYVLLSQQVMQQLKTQLGIQDKDLVDYFIDQAFESDTEQQFAENIKDDAELSDQF
ISSLYKLIKSKQSLIKPKVDLQAQNKQLEDKKNKFSAGDPQKIDIEIEKEDIKQKEKVKR
DENYENEDSDEEQNELKRQELEKRKQYAKIFPALAQRDEIDLDQPQPEQKVDKNSSKFDP
KPTNIDARQEKEKETSNKEISRKKSSKHSRSRSKSHKKEKSKRRSRSRSQGKSKKKYSRS
RSKEKKNRSYSKEKKSRRSRSKSHEKKKKRDSPDAKKDHRKKYQRDSNSPLREKKGRENS
SRSRSQEKQTRQQFKRQEVEKDSILDGVVSKISEFGCFVTLENVGGRKEGLVHISQLSSK
RVGNIQEVARIGQRVKVKVISVIGNKISLSMKDVDQITGLDKFEQKIRYEESQSLKYDPL
EQKEKKAFGVLDKDDIIKSNQNSKFGALTGILLEDKEEKNKKRIRESSQEKWERKQAEYY
SSKHLGIDKGEIDLDEGCSEDEDVEVEIRENETPFLKDTTTKAGVNLSPIRVTKNQNGSL
SRQALNAVQQAKDRREIRIQQNNALVDSINKQELQKMNLDPTAESIFLLSNLKKLGDAQT
SEIPEFKKEAMFKAALNNSNKPKQTMTIKEQKESLPIYQYKEQLIKACINNQILIVIGET
GSGKTTQMTQYLLEAGFCKSGKKIGCTQPRRVAAMSVAKRVSEEMGVVLGEEVGYSIRFE
DCTSASTVIKYMTDGMLLREALLDTELSNYSVIMLDEAHERQLNTDVLFGLLKKVAKKRK
DFHLIITSATLDAAKFSNYFFDCQVFRVPGRTFKVDVLYSVEPEQDYVEASLIVIMQIHL
HEPPGDILLFLTGQEEIDNACQILFQRMKNLGPDAPELIILPLYAGLPNELQNRIFLPTP
EGKRKCIISTNIAEASLTIDGIYYVVDPGFAKIKVYNPKLGMDSLIVAPISQASAKQRQG
RAGRTGPGKCFRLYTEDAFKNEMLPTSIPEIQRTNLANTVLLLKAMGINDLINFDFMDPP
PIQTLISALEHLYTLGCLDDEGLLTRLGLKMAEFPLEPPLSKMLITSVDLGCSDEIATII
AMLSVQNVFFCPKDKKQQADQRRAKFHHQDGDHLTLLTVYEAWKSNNFSNIWCHENFIDS
RTIKRAQDIRKQLIGIMDRYHLPVQSCGKNYAKIRKAICAGFFNHAAKKDRNEGYKTIID
NHTVNIHPTSALFQKQPDWVVYHELVLTTKEYMRNISTIEPKWLVEVAPNFFQNVNPHVL
SKAKKAEKLESLSTKSGDNEAWRLSKRRGNG

>TTHERM_00444310(gene)
ATGGCTTCTAATTTATAGTATGTCCTTCTCAGCTAGCAGGTTATGCAACAGCTGAAAACA
CAACTAGGAATTTAGGATAAAGATTTAGTAGATTATTTTATAGATTAAGCATTTGAATCA
GATACTGAGCAATAGTTTGCTGAAAATATTAAAGATGATGCAGAATTATCAGACTAATTT
ATTTCTAGTTTATATAAATTGATTAAGTCAAAGTAGAGCTTAATTAAACCGAAAGTTGAT
CTTCAAGCATAAAATAAATAACTTGAGGACAAGAAAAATAAATTTTCTGCAGGAGATCCA
TAAAAAATTGATATTGAAATCGAAAAAGAGGATATCAAGCAAAAAGAAAAGGTTAAAAGA
GATGAAAATTATGAAAATGAAGATAGTGATGAAGAATAGAATGAATTAAAAAGACAAGAA
CTAGAAAAGAGAAAGCAATATGCTAAAATTTTCCCAGCTCTTGCATAGAGAGATGAAATA
GATCTGGATTAACCTTAACCAGAGTAAAAAGTGGACAAAAATAGTAGTAAATTCGATCCA
AAGCCGACTAATATTGATGCAAGATAAGAAAAAGAAAAAGAGACTTCAAATAAAGAAATC
AGTAGAAAAAAAAGTAGCAAGCATTCAAGAAGCAGAAGCAAGTCTCATAAAAAGGAAAAA
AGTAAAAGAAGGTCTAGAAGTCGCTCATAAGGTAAAAGTAAGAAGAAATACTCTAGAAGT
AGGTCAAAAGAAAAAAAAAATCGCTCTTATTCAAAAGAAAAGAAAAGTCGTCGTTCACGC
TCTAAATCTCATGAAAAAAAGAAAAAAAGGGATTCCCCTGATGCAAAAAAAGATCATAGA
AAAAAATATTAGAGAGATTCGAATTCACCACTCAGAGAGAAAAAGGGTAGAGAAAATAGT
TCTCGCAGCAGATCATAAGAAAAGCAAACTCGTTAGCAATTCAAGAGATAAGAAGTTGAA
AAGGACTCAATTTTAGATGGAGTTGTTTCTAAAATAAGTGAATTTGGTTGTTTTGTAACA
TTAGAAAATGTTGGAGGGCGTAAAGAAGGTTTGGTTCACATTAGCTAGCTTTCAAGCAAA
AGAGTTGGAAATATTTAAGAAGTAGCGAGAATTGGATAAAGAGTAAAAGTAAAAGTAATA
AGTGTGATAGGAAACAAAATTAGTTTGAGTATGAAAGATGTTGATTAAATAACTGGTTTA
GATAAGTTTGAACAAAAAATACGATATGAGGAATCCTAATCTCTCAAGTATGACCCTCTT
GAGTAGAAAGAAAAGAAGGCATTTGGTGTGTTAGATAAAGATGATATTATCAAATCAAAT
TAAAATTCAAAGTTCGGTGCTCTAACAGGTATTCTACTTGAAGATAAAGAGGAAAAAAAT
AAAAAGAGAATCAGAGAAAGTTCTTAAGAAAAGTGGGAACGTAAGTAAGCAGAATACTAT
TCCAGTAAACATTTGGGTATTGATAAAGGCGAAATAGATTTAGATGAAGGTTGTTCAGAA
GATGAAGATGTTGAAGTTGAAATTCGTGAGAACGAAACTCCCTTCTTAAAAGATACGACA
ACAAAGGCAGGAGTAAACTTATCTCCTATTAGAGTTACTAAAAACTAGAATGGCTCTTTG
AGTAGACAAGCACTTAATGCAGTTTAACAAGCAAAAGATAGAAGAGAAATTCGTATTTAG
CAAAACAATGCTTTGGTAGATAGTATTAACAAATAAGAACTCTAAAAAATGAATTTAGAT
CCTACTGCAGAATCTATTTTCCTTTTAAGTAATTTAAAGAAGTTGGGAGATGCTTAAACA
TCGGAAATTCCAGAATTTAAAAAAGAAGCAATGTTTAAGGCTGCTCTCAACAACTCTAAC
AAACCAAAATAAACTATGACAATCAAGGAGTAAAAAGAATCTCTTCCTATCTATTAATAT
AAGGAATAACTTATCAAAGCTTGCATTAATAATTAAATTCTTATTGTTATTGGTGAAACC
GGTTCAGGAAAAACAACTTAAATGACATAGTATCTCTTAGAAGCAGGCTTTTGTAAGAGT
GGTAAGAAAATTGGGTGTACCTAACCTCGTCGTGTTGCAGCTATGAGTGTTGCTAAGCGT
GTTTCTGAAGAAATGGGTGTAGTACTTGGTGAAGAAGTAGGTTATTCAATACGTTTTGAA
GATTGTACATCTGCTTCTACAGTAATTAAATATATGACTGATGGTATGCTTCTTCGTGAG
GCCTTGCTTGACACAGAACTAAGCAACTACTCAGTTATTATGCTCGATGAAGCACATGAA
AGATAGCTAAATACAGATGTTCTTTTTGGTTTACTTAAGAAAGTAGCTAAGAAAAGAAAA
GATTTTCATTTGATTATTACTTCCGCTACCCTTGATGCTGCAAAATTCTCTAATTATTTC
TTTGATTGCTAAGTTTTCCGTGTACCAGGTCGTACCTTCAAAGTCGATGTCCTCTACTCT
GTAGAACCTGAATAGGATTATGTTGAAGCTTCTTTAATTGTAATCATGCAAATTCACTTG
CATGAACCTCCTGGCGATATTCTCCTTTTCTTAACAGGTCAAGAAGAAATTGATAATGCA
TGCTAAATATTATTCTAGCGTATGAAGAACTTAGGTCCAGATGCACCTGAACTTATTATA
TTACCTCTTTATGCTGGTTTGCCTAATGAACTATAGAATAGAATTTTCCTTCCTACTCCT
GAGGGAAAACGTAAATGTATTATATCAACTAATATTGCAGAAGCATCTCTTACCATCGAT
GGTATTTACTATGTCGTAGATCCAGGATTTGCAAAAATTAAAGTTTACAATCCAAAACTT
GGTATGGATTCCTTGATTGTTGCACCAATTTCATAGGCTTCAGCGAAATAACGTTAGGGT
CGTGCAGGTCGTACAGGTCCTGGTAAATGTTTCCGTCTTTATACTGAAGATGCTTTCAAA
AATGAAATGCTCCCAACAAGTATACCTGAAATTCAGCGTACAAACTTAGCAAACACGGTT
TTACTTTTAAAGGCAATGGGTATTAATGATTTAATCAACTTCGATTTTATGGATCCTCCT
CCTATTCAAACTTTGATTTCTGCTTTAGAACATCTTTACACTTTAGGTTGTTTGGATGAT
GAAGGTCTCCTTACACGTCTCGGTTTGAAAATGGCCGAATTTCCTTTAGAACCACCTCTC
TCTAAAATGCTTATAACAAGTGTTGATCTTGGATGTTCAGATGAAATAGCTACTATTATT
GCTATGTTGTCAGTTTAAAATGTATTTTTCTGTCCAAAAGATAAAAAATAACAAGCTGAC
CAGCGTCGTGCTAAATTTCATCATTAAGATGGAGACCACTTAACTCTTTTGACTGTATAC
GAAGCTTGGAAATCAAACAATTTTTCAAATATTTGGTGTCATGAGAATTTCATAGATTCT
AGAACAATAAAAAGAGCACAAGATATTCGTAAACAGTTGATAGGTATCATGGACCGCTAT
CATTTACCTGTTTAATCGTGTGGTAAAAATTATGCCAAAATCCGTAAGGCTATATGTGCA
GGCTTCTTTAATCATGCAGCAAAAAAAGATCGTAACGAAGGATACAAAACTATCATAGAT
AATCATACTGTTAACATACATCCTACATCTGCACTTTTTTAGAAGCAGCCGGATTGGGTA
GTTTATCACGAATTAGTTTTGACAACTAAAGAATATATGAGAAATATTTCCACAATAGAA
CCAAAGTGGCTTGTTGAAGTTGCACCGAATTTCTTTTAAAACGTAAACCCTCATGTATTA
TCAAAAGCTAAAAAGGCTGAAAAGCTTGAATCACTCTCAACTAAAAGTGGTGATAACGAA
GCTTGGCGTCTGTCTAAAAGAAGAGGAAATGGTTGA