Identifiers and Description

Gene Model Identifier

TTHERM_00105060

Standard Name

DRH11 (DExD/H box RNA helicase 11)

Aliases

PreTt23008 | 7.m00457

Description

DEAD/DEAH box helicase family protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• nucleus (IEA) | GO:0005634

Molecular Function

• ATP binding (IEA) | GO:0005524
• helicase activity (IEA) | GO:0004386
• RNA binding (IEA) | GO:0003723
• nucleic acid binding (IEA) | GO:0003676
• ATP-dependent helicase activity (IEA) | GO:0008026

Domains

• ( PF08152 ) GUCT (NUC152) domain
• ( PF00270 ) DEAD/DEAH box helicase
• ( TIGR01389 ) ATP-dependent DNA helicase RecQ
• ( TIGR01587 ) CRISPR-associated helicase Cas3
• ( PF00271 ) Helicase conserved C-terminal domain
• ( PF04851 ) type III restriction enzyme, res
• ( TIGR00614 ) ATP-dependent DNA helicase, RecQ family
• ( PF00076 ) RNA recognition motif. (a.k.a. RRM,

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.5%

TetraMine Data

TTHERM_00105060

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_00351.1	9.997093137033517e-262	DEAD/DEAH box helicase (727 aa )
Oxytricha	Contig9705.0.g90	4.998915995202644e-173	DEAD/DEAH box helicase
WormBase	WBGene00006888	1.0003503620230312e-57	locus:vbh-1 status:Confirmed UniProt:Q9N3F4 protein_id :CCD72826.1
DictyBase	DDB_G0287361	2.9992141389250636e-57	ddx41 on chromosome: 5 positio n 183547 to 185657
SGD	YPL119C	2.000065869309806e-55	DBP1 Putative ATP-dependent RN A helicase of the DEAD-box pro tein family; mutants show redu ced stability of the 40S ribos omal subunit scanning through 5 untranslated regions of mRNA s
Stentor Coeruleus	SteCoe_12603	3.532628572200807e-24

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00105060(coding)
ATGAGTAAGAATTTTACAGGTGGAAAGAGAAATTTTGCAACTGCAAATGGAAATGGCAAG
GAATCATTTGGCGAAAAGCCTCGTAAGAACTTCATTACCTCTGAAGGTAAAAAGGATTTC
AAGCCCAAGAACAGGGATTGGGATTCTGAAAGTGAAGATGAAGACACCAAGAAGAACCAA
ATTGAGGCTAAGCACAACTAAGATAACATGAGTAAATATATTAAGAATGCCAAGACTATT
GAAATTCTTAACAAGAGAGGAATCACTTATTTGTTCCCTATTTAGGAGCACTGTTTCCAA
GCTATCCAAGCTGGTAAGGATCTTATAGGAAAAGATAGAACTGGCAGTGGTAAAACCCTC
GGTTTCTCTTTGCCTCTCATTGAAAAATTAAGAAATGAAGGTAATTTCACTAGCATCAAA
AAGAAACAAACTCCATATATGCTCGTTGTAGTTCCTACTAGAGAACTCTGTATCTAGGTT
GCAAATGAAATTAACACACTCAAGCACACTGACAATGAATTTAGAGTTTTACAAATTTAC
GGAGGTGTCGATGTTAGAGAGCAAGCAAATTAAATTAGAGATGGTGTTGAAATCGTTGTT
GGTACTCCTGGTCGTATCATTGATCAATATGAAAGAGGTGCTTTGATGTTCCACTCTATT
ATAGCCACTGTTTTAGATGAAGCCGATTAAATGCTTAACTTTGGTTTCTAAGAAGACATC
GAAAAGATCTTTGGATTTATCAAGAATGACAAGGGTGAAGAAAGACCTTAGAATTTGTTA
TTCTCAGCTACCATGCCTTCTTGGGTTCATGACATTGCTAGAAAGTTTTTGAGAGAAGAC
AGAGTTTTAATTGATTTAGTTAAGAATTTAGGTAACAAGACAAGTTAAGATGTCACTCAC
TTAGCCATCAACTGTCCTTACTTCTAAAGAACTGAAGCTATCGGAGATGTTATCTTATGC
TATGGTGGTGGTGCTCACTCCAGAGTCATCATCTTCTGTGAAACTAAGAATGAAGCAAAT
GAAATCATGCTTAAGGCAAATATTAAATAGGATGTTTAGGTACTCCATGGTGATATTCCT
TAAAAGTAGCGTGAAATCACATTCCAAGGGTTCAGAGAAGGTAAATTCAAGTGCTTAGTT
GCTACTAATGTTGCTGCTAGAGGTTTGGATATCCCTGAAGTTGATTTAATTGTCTAATTA
GAACCTCCCAAAGAACTTGATGCTTACATTCATAGATCTGGTAGAACAGGAAGAGCTGGT
AAGAAGGGTGTTTGCATTACCTTCTACACCAAGAAGCAATAATCTTTGATTGAAAGAATC
GAAAAGAAGTGTCACATTAAGATGCAAAAGGTCGGTGCTCCTCAACCAGCTGACCTTATT
CGTGCTTCTTAAAACGATATCAAAAAGAACCTTATGTCAGTTAACAGAACTGTTTTAGGA
ATATTCAAGGAAGTTTCAGTCGATTTAATTTAGGAATTCGGACCTGAAGAAGCTTTGGAA
CGTGCTATTGCATTCATCTCTGGTTTCACTGAAAAAATGAAATAACGTTCTTTATTATGC
TGTCTTGAAGGTTACGTTACTTATATTGTACGTACCCCAAGCGAATTTAGAGGTCTTGGC
TACATTTGGGGATGGGTTAAGAATAACTTCCCTGCTGAATGCACTGATAGAATCAAAGGT
ATGAAGAAGTTTGCAGATAACAAGGGTGCCGTCTTCGATGTTGCCGAAGAAGACAAAGAA
GTTTTCGATGCCTATATTAATGAATTAGCAGAAGGAACAAAGCAAGGTTTGGAATTAGAA
GTTGCTACTACTATTCCTGAAATCGAAGAAGAAGGTGGATATAGTTAAGGATACAACGGT
GGCAACAAGTCTGCTCCAAATGGATTCTCATTCACTAATACCAACCCTAAAATGGACCCC
AAGCTTAAGAGAGAACTTGAAATCTTCATTGGTGGCTTACCCTACGACTGCAAGGAAAAA
GATGTTACTTAACACTTTGATAAAAATGGTGTTTAATTCTCTTCTCTCCGTGCTCTTAGT
GGTGATGATGGCAAATTTAAAGGTATTATTTTCGCAATGTGTGCCAATTAAGCTGGTGTC
AAGAAGGCCTTGACCTTAGATGGATAAAAGTTCATGGGAAGACCTCTCAGAATTAACATG
GCTTGCAAAAAGTGA

>TTHERM_00105060(protein)
MSKNFTGGKRNFATANGNGKESFGEKPRKNFITSEGKKDFKPKNRDWDSESEDEDTKKNQ
IEAKHNQDNMSKYIKNAKTIEILNKRGITYLFPIQEHCFQAIQAGKDLIGKDRTGSGKTL
GFSLPLIEKLRNEGNFTSIKKKQTPYMLVVVPTRELCIQVANEINTLKHTDNEFRVLQIY
GGVDVREQANQIRDGVEIVVGTPGRIIDQYERGALMFHSIIATVLDEADQMLNFGFQEDI
EKIFGFIKNDKGEERPQNLLFSATMPSWVHDIARKFLREDRVLIDLVKNLGNKTSQDVTH
LAINCPYFQRTEAIGDVILCYGGGAHSRVIIFCETKNEANEIMLKANIKQDVQVLHGDIP
QKQREITFQGFREGKFKCLVATNVAARGLDIPEVDLIVQLEPPKELDAYIHRSGRTGRAG
KKGVCITFYTKKQQSLIERIEKKCHIKMQKVGAPQPADLIRASQNDIKKNLMSVNRTVLG
IFKEVSVDLIQEFGPEEALERAIAFISGFTEKMKQRSLLCCLEGYVTYIVRTPSEFRGLG
YIWGWVKNNFPAECTDRIKGMKKFADNKGAVFDVAEEDKEVFDAYINELAEGTKQGLELE
VATTIPEIEEEGGYSQGYNGGNKSAPNGFSFTNTNPKMDPKLKRELEIFIGGLPYDCKEK
DVTQHFDKNGVQFSSLRALSGDDGKFKGIIFAMCANQAGVKKALTLDGQKFMGRPLRINM
ACKK

>TTHERM_00105060(gene)
ATGAGTAAGAATTTTACAGGTGGAAAGAGAAATTTTGCAACTGCAAATGGAAATGGCAAG
GAATCATTTGGCGAAAAGCCTCGTAAGAACTTCATTACCTCTGAAGGTAAAAAGGATTTC
AAGCCCAAGAACAGGGATTGGGATTCTGAAAGTGAAGATGAAGACACCAAGAAGAACCAA
ATTGAGGCTAAGCACAACTAAGATAACATGAGTAAATATATTAAGAATGCCAAGACTATT
GAAATTCTTAACAAGAGAGGAATCACTTATTTGTTCCCTATTTAGGAGCACTGTTTCCAA
GCTATCCAAGCTGGTAAGGATCTTATAGGAAAAGATAGAACTGGCAGTGGTAAAACCCTC
GGTTTCTCTTTGCCTCTCATTGAAAAATTAAGAAATGAAGGTATGAAAATTTACAAATAT
TTAAGCAATTTAAACATTTACATTATATTTAAATTGTAAACTCTTAATAATTTATCTTTC
TCCATATTAACAGGTAATTTCACTAGCATCAAAAAGAAACAAACTCCATATATGCTCGTT
GTAGTTCCTACTAGAGAACTCTGTATCTAGGTTGCAAATGAAATTAACACACTCAAGCAC
ACTGACAATGAATTTAGAGTTTTACAAATTTACGGAGGTGTCGATGTTAGAGAGCAAGCA
AATTAAATTAGAGATGGTGTTGAAATCGTTGTTGGTACTCCTGGTCGTATCATTGATCAA
TATGAAAGAGGTGCTTTGATGTTCCACTCTATTATAGCCACTGTTTTAGATGAAGCCGAT
TAAATGCTTAACTTTGGTTTCTAAGAAGACATCGAAAAGATCTTTGGATTTATCAAGAAT
GACAAGGGTGAAGAAAGACCTTAGAATTTGTTATTCTCAGCTACCATGCCTTCTTGGGTT
CATGACATTGCTAGAAAGTTTTTGAGAGAAGACAGAGTTTTAATTGATTTAGTTAAGAAT
TTAGGTAACAAGACAAGTTAAGATGTCACTCACTTAGCCATCAACTGTCCTTACTTCTAA
AGAACTGAAGCTATCGGAGATGTTATCTTATGCTATGGTGGTGGTGCTCACTCCAGAGTC
ATCATCTTCTGTGAAACTAAGAATGAAGCAAATGAAATCATGCTTAAGGCAAATATTAAA
TAGGATGTTTAGGTACTCCATGGTGATATTCCTTAAAAGTAGCGTGAAATCACATTCCAA
GGGTTCAGAGAAGGTAAATTCAAGTGCTTAGTTGCTACTAATGTTGCTGCTAGAGGTTTG
GATATCCCTGAAGTTGATTTAATTGTCTAATTAGAACCTCCCAAAGAACTTGGTAATGAT
TAATTTATAATTATTTTAATAATAAATATTAAATAAATTTAATATTATTAAAAGATGCTT
ACATTCATAGATCTGGTAGAACAGGAAGAGCTGGTAAGAAGGGTGTTTGCATTACCTTCT
ACACCAAGAAGCAATAATCTTTGATTGAAAGAATCGAAAAGAAGTGTCACATTAAGATGC
AAAAGGTCGGTGCTCCTCAACCAGCTGACCTTATTCGTGCTTCTTAAAACGATATCAAAA
AGAACCTTATGTCAGTTAACAGAACTGTTTTAGGAATATTCAAGGAAGTTTCAGTCGATT
TAATTTAGGAATTCGGACCTGAAGAAGCTTTGGAACGTGCTATTGCATTCATCTCTGGTT
TCACTGAAAAAATGAAATAACGTTCTTTATTATGCTGTCTTGAAGGTTACGTTACTTATA
TTGTACGTACCCCAAGCGAATTTAGAGGTCTTGGCTACATTTGGGGATGGGTTAAGAATA
ACTTCCCTGCTGAATGCACTGATAGAATCAAAGGTATGAAGAAGTTTGCAGATAACAAGG
GTGCCGTCTTCGATGTTGCCGAAGAAGACAAAGAAGTTTTCGATGCCTATATTAATGAAT
TAGCAGAAGGAACAAAGCAAGGTTTGGAATTAGAAGTTGCTACTACTATTCCTGAAATCG
AAGAAGAAGGTGGATATAGTTAAGGATACAACGGTGGCAACAAGTCTGCTCCAAATGGAT
TCTCATTCACTAATACCAACCCTAAAATGGACCCCAAGCTTAAGAGAGAACTTGAAATCT
TCATTGGTGGCTTACCCTACGACTGCAAGGAAAAAGATGTTACTTAACACTTTGATAAAA
ATGGTGTTTAATTCTCTTCTCTCCGTGCTCTTAGTGGTAAGAAATTTATTTATTTATTTT
TCTATATAAAGTCTTTTTAGGTTTTATAAAGCATATACTGATCAAAAAGAATATTTTTGT
AAATAAAACAAATGCATTCACAAACATTCATTTGAAGTTAAAGTTACAATTTATTAAAAT
TATTTCTAAATAAAATAGGTGATGATGGCAAATTTAAAGGTATTATTTTCGCAATGTGTG
CCAATTAAGCTGGTGTCAAGAAGGCCTTGACCTTAGATGGATAAAAGTTCATGGGAAGAC
CTCTCAGAATTAACATGGCTTGCAAAAAGTGA