Identifiers and Description

Gene Model Identifier

TTHERM_00048980

Standard Name

DPB2 (DNA Polymerase B subunit 2)

Aliases

PreTt11277 | 3.m01906 | 3824.m03035

Description

hypothetical protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Molecular Function

• DNA binding (IEA) | GO:0003677
• DNA-directed DNA polymerase activity (IEA) | GO:0003887

Biological Process

• DNA replication (IEA) | GO:0006260

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.4%

TetraMine Data

TTHERM_00048980

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_01657.1	9.997093137033517e-262	hypothetical protein (646 aa)
Oxytricha	Contig13216.0.g100	7.002785992501305e-33	DNA polymerase alpha/epsilon s ubunit B
DictyBase	DDB_G0278367	4.9976494746363024e-29	DDB_G0278367 on chromosome: 3 position 766301 to 768775
WormBase	WBGene00017237	1.0004572433669413e-23	locus:pole-2 Probable DNA po lymerase epsilon subunit 2 s tatus:Partially_confirmed Un iProt:Q19196 protein_id:CCD6 7651.1
SGD	YPR175W	6.002144168983342e-19	DPB2 Second largest subunit of DNA polymerase II (DNA polyme rase epsilon), required for no rmal yeast chromosomal replica tion; expression peaks at the G1/S phase boundary; potential Cdc28p substrate

General Information

No Data fetched for General Information

Associated Literature

No Data fetched for Associated Literature

Sequences

>TTHERM_00048980(coding)
ATGGATAAGAGGTCATTAATAAAAAGGTTTACAGAAGAGGGATATACACTCCGTCCAGAA
TGCTTGAATCATTTAACAGAGTACTTCTCTTAACTTAAGATTTAGAATAATAATAAAATT
ACTCCAGATGTTGTAAAAACTCACATGAGTAAAATTTTAGAGAATGTTAAATCACTATAA
TCTCATCAAGGAGATATAATTTTAGGAGAACAAACAGTTAAAGGTGCAATTGAATTACTA
TAAAGACCTTAAAACTAAGTGATGGAGTTAGAAATAGATGTAGATAAAGAAAAATTAAGT
GAAGAAAATACAATTATTGATGATGACAGAGAGAAGAAAGTAAATGATATAATCAATGAA
AAGTATTTACATACAATAGTTGTTTTGGATACAATGAATGAAACTCCTAGAATAAGAATT
CATAACAATAAACCCTATACAGAATTTATAGTCAACGCTAATACACAAGAGGAGAAAAAA
TAAACAGTTTCATTGGGTGCACCCTCAGATAAAGTTAATGTTTTCATAAAAAGACTAGAG
ATAATTAAAACAAAACTTTCCTAAGGTAAAAAATACTACTTTGGAGCAGAAAACAAAAAG
AAAGTTGCTGGTACAAATGATCTTGAAGGTGAAGAATAACAATAATAGTCATAAGAATTA
AACGATATTGGTTCTTTAATTGGAAGTAAAGGAAAAGAAATGTGCTGCCTAGGTATGATT
TATGAAGGCGTTCCAGGAGATTATTATATGCAAGATGAGTTTAGTAGAGTGAAGATAAAT
TTAGAATAGGCATAAGTTGAGTTAGGCTATGTAACAGTCACAAGTATTGTTATTGCAAAA
GGTGTTTTTGATTAAATGTAGGGTGCTTTTGTAATTTCTAAATTGATGCTACCTGAATTC
GAAGAAGAAGTAAATTTGAATCCTTCTGTATTCAAGAAAGAAAGTTCTGATTTTTTTGGA
GCAAAAGCTAAGGTGCAAAGAATTTTAGGTAAATTAATCCAACTCGAAATAGAAAGTGCA
TCATTAGGAAAATAAGGTAGCAGAGCCTAAAATTTAACTAGATTTTAAAAAGAAAGACAG
CTTGAAATGGGAATATTTGACTTAGATTTAAACCCTTACTTTTAAGTTTCAGAAAAAAAT
GAATATTGTGTTTGTGTGTTCAGCGATTTCTTAATCAGTGATAGAAATACTCTTAAAAAG
TTTGAGGGTATTCTTTAAGTTTACGAAAGCTAGTTAAAACCCTTAGTTATTATATTAATG
GGAGCCTTCTTTAATGTATCAGAAATTAACTCAGAATTTGTAAATGATTAAGTCAAAGAA
GCAATAAACGATTTCTTGAACTTATTAAATAAATTCAAGTCGCTAAGAGACAATTGCTAT
TGGATAATGGTCCCTCATATAAATGATATTGGAGGAATGCCAGTTTAACCTAAGAGCGAA
TTACCTGAACATCTTTTCACAGAAATAAAGTCTATTATCCCTTTCTTTAAATTAGTATAA
AATCCTTGTCGTTTATCAATTTTAGGTAAAACCTTCTTGATTTAGAGAAATGATTTAATC
AAAGATTTACGTAAAAGGTAAATTGTGATCAATCATCATAAAGATATTTAACTAAATTAC
GCTTAAACTATTCTATCTTAAAGACATTTATCTCCTCTTCCACTTATAATAAAACCAATA
ATTTGGAATTATGATAATACTTTGTTATTTTATGATAATCCTGATTATTTAATCTTGGCT
GATTCTTATAGTGATTAATTTGATTTTATTATGTAAGAAAAAGTGTTGACAAAGGAAGAA
TAAAAATCAAATATTTAAAAAACATATGTACTTAATCCAGGTAGTTTTGAGAAAAAATCT
ACTTTCACAGTTTTGTACCCATTAGAGGGGAGAATTGAAACTTGCTCTGTTTGA

>TTHERM_00048980(protein)
MDKRSLIKRFTEEGYTLRPECLNHLTEYFSQLKIQNNNKITPDVVKTHMSKILENVKSLQ
SHQGDIILGEQTVKGAIELLQRPQNQVMELEIDVDKEKLSEENTIIDDDREKKVNDIINE
KYLHTIVVLDTMNETPRIRIHNNKPYTEFIVNANTQEEKKQTVSLGAPSDKVNVFIKRLE
IIKTKLSQGKKYYFGAENKKKVAGTNDLEGEEQQQQSQELNDIGSLIGSKGKEMCCLGMI
YEGVPGDYYMQDEFSRVKINLEQAQVELGYVTVTSIVIAKGVFDQMQGAFVISKLMLPEF
EEEVNLNPSVFKKESSDFFGAKAKVQRILGKLIQLEIESASLGKQGSRAQNLTRFQKERQ
LEMGIFDLDLNPYFQVSEKNEYCVCVFSDFLISDRNTLKKFEGILQVYESQLKPLVIILM
GAFFNVSEINSEFVNDQVKEAINDFLNLLNKFKSLRDNCYWIMVPHINDIGGMPVQPKSE
LPEHLFTEIKSIIPFFKLVQNPCRLSILGKTFLIQRNDLIKDLRKRQIVINHHKDIQLNY
AQTILSQRHLSPLPLIIKPIIWNYDNTLLFYDNPDYLILADSYSDQFDFIMQEKVLTKEE
QKSNIQKTYVLNPGSFEKKSTFTVLYPLEGRIETCSV

>TTHERM_00048980(gene)
ATGGATAAGAGGTCATTAATAAAAAGGTTTACAGAAGAGGGATATACACTCCGTCCAGAA
TGCTTGAATCATTTAACAGAGTACTTCTCTTAACTTAAGATTTAGAATAATAATAAAATT
ACTCCAGATGTTGTAAAAACTCACATGAGTAAAATTTTAGAGAATGTTAAATCACTATAA
TCTCATCAAGGAGATATAATTTTAGGAGAACAAACAGTTAAAGGTGCAATTGAATTACTA
TAAAGACCTTAAAACTAAGTGATGGAGTTAGAAATAGATGTAGATAAAGAAAAATTAAGT
GAAGAAAATACAATTATTGATGATGACAGAGAGAAGAAAGTAAATGATATAATCAATGAA
AAGTATTTACATACAATAGTTGTTTTGGATACAATGAATGAAACTCCTAGAATAAGAATT
CATAACAATAAACCCTATACAGAATTTATAGTCAACGCTAATACACAAGAGGAGAAAAAA
TAAACAGTTTCATTGGGTGCACCCTCAGATAAAGTTAATGTTTTCATAAAAAGACTAGAG
ATAATTAAAACAAAACTTTCCTAAGGTAAAAAATACTACTTTGGAGCAGAAAACAAAAAG
AAAGTTGCTGGTACAAATGATCTTGAAGGTGAAGAATAACAATAATAGTCATAAGAATTA
AACGATATTGGTTCTTTAATTGGAAGTAAAGGAAAAGAAATGTGCTGCCTAGGTATGATT
TATGAAGGCGTTCCAGGAGATTATTATATGCAAGATGAGTTTAGTAGAGTGAAGATAAAT
TTAGAATAGGCATAAGTTGAGTTAGGCTATGTAACAGTCACAAGTATTGTTATTGCAAAA
GGTGTTTTTGATTAAATGTAGGGTGCTTTTGTAATTTCTAAATTGATGCTACCTGAATTC
GAAGAAGAAGTAAATTTGAATCCTTCTGTATTCAAGAAAGAAAGTTCTGATTTTTTTGGA
GCAAAAGCTAAGGTGCAAAGAATTTTAGGTAAATTAATCCAACTCGAAATAGAAAGTGCA
TCATTAGGAAAATAAGGTAGCAGAGCCTAAAATTTAACTAGATTTTAAAAAGAAAGACAG
CTTGAAATGGGAATATTTGACTTAGATTTAAACCCTTACTTTTAAGTTTCAGAAAAAAAT
GAATATTGTGTTTGTGTGTTCAGCGATTTCTTAATCAGTGATAGAAATACTCTTAAAAAG
TTTGAGGGTATTCTTTAAGTTTACGAAAGCTAGTTAAAACCCTTAGTTATTATATTAATG
GGAGCCTTCTTTAATGTATCAGAAATTAACTCAGAATTTGTAAATGATTAAGTCAAAGAA
GCAATAAACGATTTCTTGAACTTATTAAATAAATTCAAGTCGCTAAGAGACAATTGCTAT
TGGATAATGGTCCCTCATATAAATGATATTGGAGGAATGCCAGTTTAACCTAAGAGCGAA
TTACCTGAACATCTTTTCACAGAAATAAAGTCTATTATCCCTTTCTTTAAATTAGTATAA
AATCCTTGTCGTTTATCAATTTTAGGTAAAACCTTCTTGATTTAGAGAAATGATTTAATC
AAAGATTTACGTAAAAGGTAAATTGTGATCAATCATCATAAAGATATTTAACTAAATTAC
GCTTAAACTATTCTATCTTAAAGACATTTATCTCCTCTTCCACTTATAATAAAACCAATA
ATTTGGAATTATGATAATACTTTGTTATTTTATGATAATCCTGATTATTTAATCTTGGCT
GATTCTTATAGTGATTAATTTGATTTTATTATGTAAGAAAAAGTGTTGACAAAGGAAGAA
TAAAAATCAAATATTTAAAAAACATATGTACTTAATCCAGGTAGTTTTGAGAAAAAATCT
ACTTTCACAGTTTTGTACCCATTAGAGGGGAGAATTGAAACTTGCTCTGTTTGA