Identifiers and Description
Gene Model Identifier
TTHERM_00487150
Standard Name
DIC2 (Dynein Intermediate Chain 2)
Aliases
PreTt19646 | 59.m00284 | 3680.m00141 | IC78 | IC2
Description
IC2 dynein intermediate chain 2; Intermediate chain subunit of ciliary three-headed outer arm dynein (OAD)
Genome Browser (Macronucleus)
Genome Browser (Micronucleus)
Gene Ontology Annotations
Cellular Component Molecular Function Biological Process
Domains
( PF00400 ) WD domain, G-beta repeat
Gene Expression Profile
Tetrahymena Functional Genomics Database:
Change in Gene Expression
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 11.4%
TetraMine Data
TTHERM_00487150
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description
Stentor Coeruleus SteCoe_28057 0
Tetrahymena borealis EI9_12221.1 9.997093137033517e-262 hypothetical protein (668 aa)
Oxytricha Contig16948.0.0.g28 9.997093137033517e-262 WD domain, G-beta repeat
DictyBase DDB_G0280849 5.999781043483669e-32 dicA on chromosome: 3 position
3856978 to 3859184
WormBase WBGene00015927 2.000620012690291e-23 locus:dyci-1 status:Confirme
d UniProt:O45087 protein_i
d:CCD64991.1
SGD YDR364C 0.0000029996948234116693 CDC40 Pre-mRNA splicing factor
, important for catalytic step
II of pre-mRNA splicing and p
lays a role in cell cycle prog
ression; required for DNA synt
hesis during mitosis and meios
is; has WD repeats
General Information
No Data fetched for General Information
Associated Literature
Ref:16933976 : Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA, Ref:9399595 : Ikawa Y, Okada A, Imahori H, Shiraishi H, Inoue T (1997) Identification of the nucleotides in the A-rich bulge of the Tetrahymena ribozyme responsible for an efficient self-splicing reaction. Journal of biochemistry 122(4):878-82
Sequences
>TTHERM_00487150(coding)ATG CCT CCA AAA TAA ACA AAA GTT GTA GCC AGC CGT AAG ACT GTT ATG CCT ATT AGT AGA GCA GGC AGA GCT TAA ATC CGT AGA AAG GAT TCT AAC ACT CAA AAT AAT ATG AAT GAC TAA GGT ATG GAA GAT GAG GAA ATC GAT CAA CAA AGA GAG GGA ATG AAG AAC CAA TAC GAA CAA TTA ACT GCC CAA GAA TTA AAT GAA GAT ATG CCT TCA AAA ATG TTA GAG CCA AAG AAC CCT CAA GCT CCT AAA AAT ATC ACT GTT TAT GAC TAT TAT ACT CGT AAA TTT AAG ACT GAT GAG TTA GTC GAT TAA ATG ATT GTT CAT TTT TCT ATG GAT GGT GAT TAT ATT TGG AAG GAA TCA AAT GAA TAC AAA ACT TAA GAA GAA ATT CGT GAT ACA AAG AAA GCT TTG ATC AAG GAA GCA ATG CGT AAA TAA GAA AGT GAA GAA CCT GGT GCA AAC CAT GAT GAA GAA GCA ATT AAA TAA ACT CTA AGA AAC AAA TTT AAT TAC AAT ACA CGT GAA TGT TAA ACA ATT AAT CCT TCA ATA AGA GAG CGT GGA GTT TCT ACC GAA CCT CCA CCA TCT GAT ACA ATC TGT GGC AAT ATT ACT CAA TGG GAA ATT TTT GAT GCT TAT TAT GCA GAA ATT ATG AAG GAC CAT CAA ATT GAA AAT AAA AAG AAG AAA GAG GTT GAT TAG GAT AAG AAG CAA GAT TAA TCT ATG TAC TCA ACT TCG TTC AAA AGA TGT TGC AAA ATT ATG GAA CGT ATG GTT GTA TAA AAC GAT TAG GAA GAT AAG TAT CAT GAT TAT CGT TAT TAT TGG AGT TAA GGC GAC AAC CTA GAA GCT GGT AAA AAT GAA GGT CAT TTA TTA CCT ATT TGG AGA TTT AGT AAT GAA AAG CAA AGA AAG AAA AAT GTT ACT AGT ATT TGT TGG AAC CCA TTA TAT CCA GAT TTA TTC GCA GTT AGT TTG GGT AGT TAT GAC TTT ACT AAA TAG CGT ATG GGT TTA ATT TGC TTA TAT TCT TTA AAA AAC ACC ACA CAT CCA GAA TAT GCC TTC AAC TGT GAA GCT GGT GTT ATG TGT TTA GAT TTC CAT CCT AAA AGT GCT GCC CTT CTT GCT GTC GGT TTG TAT GAT GGT ACT GTG TTA GTT TAC GAT ATC CGT AAC AAA CAC AAG AAA CCT ATT TAT TAA TCA ACT GTA CGT AAT TAA AAG CAC ACA GAT CCT GTC TGG CAA GTT AAA TGG AAT CCA GAT ACT TCC AAA AAT TAT AAT TTT TAT TCC ATT TCT AGT GAT GGT AGA GTC ATG AAT TGG ATT CTT ATG AAA AAT AAG TTA GAA CCT GAA GAA GTT ATT TTA CTT CGT CTT GTA GGT AAG AAT GAA GAG GAA TCA ACT TTA ATC GGT TTA GCT TGT GGT CTC TGC TTT GAT TTC AAT AAA TTT GAA CCT CAT ATC TTC CTT GTA GGT ACA GAA GAA GGT AAA ATT CAT AAG TGT TCT CGT GCT TAC TCT GGC TAG TAT TAA GAA ACC TAC AAC GGC CAT CTT CTT GCC GTC TAC AAA GTT AAG TGG AAT AAC TTC CAT CCT AGA ACT TTC ATT TCT GCT TCT GCT GAT TGG ACT GTA AGA ATT TGG GAT AGT AAA TAC ACT TCA TAG ATT ATT TGT TTT GAT TTA TCT ATG ATG GTA GTC GAT GCT GTC TGG GCT CCT TAC TCA TCA ACT GTC TTT GCA TGT GCT ACT ATG GAC AAA GTT CAA GTT TAT GAT TTG AAC GTA GAT AAA CTC AAT AAA TTG GCA GAA CAA AAG ATT GTT AAA TAA CCT AAG TTA ACT AAC TTG TCT TTC AAT TAT AAA GAT CCT ATC TTG TTA GTT GGT GAT TCT CAC GGT GGT GTT ACT CTT GTC AAG CTC TCC CCT AAT CTT TGC AAA AGT GGA CCT GAA ATT AAA TAA ACT GAA GAT AAA AAA GCA ATG GAA GAA TTT AAA AAT GTA AAA ATA GAG GAT TAC GAA AGA GAA AAG ATG GAA AAT CTT CTC GCT GTA GTT AGT AAA TGG GAA AGG GAA GAT GCT TGA >TTHERM_00487150(protein)M P P K Q T K V V A S R K T V M P I S R A G R A Q I R R K D S N T Q N N M N D Q G M E D E E I D Q Q R E G M K N Q Y E Q L T A Q E L N E D M P S K M L E P K N P Q A P K N I T V Y D Y Y T R K F K T D E L V D Q M I V H F S M D G D Y I W K E S N E Y K T Q E E I R D T K K A L I K E A M R K Q E S E E P G A N H D E E A I K Q T L R N K F N Y N T R E C Q T I N P S I R E R G V S T E P P P S D T I C G N I T Q W E I F D A Y Y A E I M K D H Q I E N K K K K E V D Q D K K Q D Q S M Y S T S F K R C C K I M E R M V V Q N D Q E D K Y H D Y R Y Y W S Q G D N L E A G K N E G H L L P I W R F S N E K Q R K K N V T S I C W N P L Y P D L F A V S L G S Y D F T K Q R M G L I C L Y S L K N T T H P E Y A F N C E A G V M C L D F H P K S A A L L A V G L Y D G T V L V Y D I R N K H K K P I Y Q S T V R N Q K H T D P V W Q V K W N P D T S K N Y N F Y S I S S D G R V M N W I L M K N K L E P E E V I L L R L V G K N E E E S T L I G L A C G L C F D F N K F E P H I F L V G T E E G K I H K C S R A Y S G Q Y Q E T Y N G H L L A V Y K V K W N N F H P R T F I S A S A D W T V R I W D S K Y T S Q I I C F D L S M M V V D A V W A P Y S S T V F A C A T M D K V Q V Y D L N V D K L N K L A E Q K I V K Q P K L T N L S F N Y K D P I L L V G D S H G G V T L V K L S P N L C K S G P E I K Q T E D K K A M E E F K N V K I E D Y E R E K M E N L L A V V S K W E R E D A >TTHERM_00487150(gene)ATG CCT CCA AAA TAA ACA AAA GTT GTA GCC AGC CGT AAG ACT GTT ATG CCT ATT AGT AGA GCA GGC AGA GCT TAA ATC CGT AGA AAG GAT TCT AAC ACT CAA AAT AAT ATG AAT GAC TAA GGT ATG GAA GAT GAG GAA ATC GAT CAA CAA AGA GAG GTA TAT AAT ATA TTA AAT TCA CTC GTA AAT TAG ATG TCC TCA ACA AAC AAA ACA AAT AAT ACT CTA ATT TAA ACA AAA ATA TTT TAA ATA TTC TAT TTT TGT CTA GCA AAA TTT AGA ATT GAG CTA GTG TAA AAT AAA TAA AAA AAT GCT AGG GAA AGG CAT TAA ATA TTG AGG ATA TTT AAA CGA AGA TAC TAC AGT TTA GTT ATT AAT TTA ACT AAA TTA TTT ATT TAA TGA ACT AAA GGG AAT GAA GAA CCA ATA CGA ACA ATT AAC TGC CCA AGA ATT AAA TGA AGA TAT GCC TTC AAA AAT GTT AGA GCC AAA GAA CCC TCA AGC TCC TAA AAA TAT CAC TGT TTA TGA CTA TTA TAC TCG TAA ATT TAA GAC TGA TGA GTT AGT CGA TTA AAT GAT TGT TCA TTT TTC TAT GGA TGG TGA TTA TAT TTG GAA GGA ATC AAA TGA ATA CAA AAC TTA AGA AGA AAT TCG TGA TAC AAA GAA AGC TTT GAT CAA GGA AGC AAT GCG TAA ATA AGA AAG TGA AGA ACC TGG TGC AAA CCA TGA TGA AGA AGC AAT TAA ATA AAC TCT AAG AAA CAA ATT TAA TTA CAA TAC ACG TGA ATG TTA AAC AAT TAA TCC TTC AAT AAG AGA GCG TGG AGT TTC TAC CGA ACC TCC ACC ATC TGA TAC AAT CTG TGG CAA TAT TAC TCA ATG GGA AAT TTT TGA TGC TTA TTA TGC AGA AAT TAT GAA GGT AAA ATA ACT TAT TCT AAA ATA GGC ATA TAT TTT GCT TTT GAA GTA AGC TCA ATC AAA TTT TAA TAT CTT TGC AAC GAA GAT TTT ACC TTC CGT TGC AAA GCA AGT GAT TGA GCA AAT GAT CAA GCA ATT AAG CTA TAT AAA ATC AAA ATT AGA AGT TAC AAT TCA ATT TAT TAG AAG AAT GCA AGC AAA TCT TTT TAT TTT TCA AAA TTG ATT TTA AAA AAC TAA AAA AAA TAA AAA TTT TAA AAG ATT TAA AAC AAA AAA GTT ACA TTT ATT TAA AGT TTC TTA AAT TTT TCA ACT AAT ATT ACT TAG TAG TTT ATA ATT AAA TTG GAT AAA CTG ATA TTA TTA TCA TTA AAA ATA TTT AAA ATT TCA AAA TAT TAA CAT TTT TTA AGG AAA ATT TGT ATC AAA AAT AAA ATT ATT TTT TAG AAA ATA AAA ACT CAT ACA TAT TAA ATT TGA TTA TAT TTC CAT TAC ATA GCA TTA AAA ATA TTA TAA TAA TTT CAA TAA GGA TTT TAC AAT TAT ATT AAA TAC AAA TTT TAT ATT TAT GTA ATC AAA TAG GAC CAT CAA ATT GAA AAT AAA AAG AAG AAA GAG GTT GAT TAG GAT AAG AAG CAA GAT TAG TAA ATA ATT ATT ATT TAG TAT AAC TTT GAT TTA TAT AAT TAT TTT TGT TTT ATT TAA AAT TAG ATC TAT GTA CTC AAC TTC GTT CAA AAG ATG TTG CAA AAT TAT GGA ACG TAT GGT TGT ATA AAA CGA TTA GGA AGA TAA GTA TCA TGA TTA TCG TTA TTA TTG GAG TTA AGG CGA CAA CCT AGA AGC TGG TAA AAA TGA AGG TAA TAT ATA CTT TTA AAA AAT GAA TTA AGA AAA AAC TAA GAT TTT AAT TTA AAA ATA ATA TAA AAA AGG TCA TTT ATT ACC TAT TTG GAG ATT TAG TAA TGA AAA GCA AAG AAA GAA AAA TGT TAC TAG TAT TTG TTG GAA CCC ATT ATA TCC AGA TTT ATT CGC AGT TAG TTT GGG TAG TTA TGA CTT TAC TAA ATA GCG TAT GGG TTT AAT TTG CTT ATA TTC TTT AAA AAA CAC CAC ACA TCC AGA ATA TGC CTT CAA CTG TGA AGC TGG TGT TAT GTG TTT AGA TTT CCA TCC TAA AAG TGC TGC CCT TCT TGC TGT CGG TTT GTA TGA TGG TAC TGT GTT AGT TTA CGA TAT CCG TAA CAA ACA CAA GAA ACC TAT TTA TTA ATC AAC TGT ACG TAA TTA AAA GCA CAC AGA TCC TGT CTG GCA AGT TAA ATG GAA TCC AGA TAC TTC CAA AAA TTA TAA TTT TTA TTC CAT TTC TAG TGA TGG TAG AGT CAT GAA TTG GAT TCT TAT GAA AAA TAA GTT AGA ACC TGA AGA AGT TAT TTT ACT TCG TCT TGT AGG TAA GAA TGA AGA GGA ATC AAC TTT AAT CGG TTT AGC TTG TGG TCT CTG CTT TGA TTT CAA TAA ATT TGA ACC TCA TAT CTT CCT TGT AGG TAC AGA AGA AGG TAA AAT TCA TAA GTG TTC TCG TGC TTA CTC TGG CTA GTA TTA AGA AAC CTA CAA CGG CCA TCT TCT TGC CGT CTA CAA AGT TAA GTG GAA TAA CTT CCA TCC TAG AAC TTT CAT TTC TGG TAA TAT TAT TTA CTA TTT ATT TCA CAT CAA AAA ATA AAA TAA AAA CAA ATA AGA ATT GTT AAG AGT GAA AAT TAA ACT ATT TTT TAA TCT AAA ATA GCT TCT GCT GAT TGG ACT GTA AGA ATT TGG GAT AGT AAA TAC ACT TCA TAG ATT ATT TGT TTT GAT TTA TCT ATG ATG GTA GTC GAT GCT GTC TGG GCT CCT TAC TCA TCA ACT GGT AAA TAA TTC AAA AAT AAA TCA TAA AAA TAT AAT TTG CTT ATT AAT AAT AAT AAT AAA TAC AGT CTT TGC ATG TGC TAC TAT GGA CAA AGT TCA AGT TTA TGA TTT GAA CGT AGA TAA ACT CAA TAA ATT GGC AGA ACA AAA GAT TGT TAA ATA ACC TAA GTT AAC TAA CTT GTC TTT CAA TTA TAA AGA TCC TAT CTT GTT AGT TGG TGA TTC TCA CGG TGG TGT TAC TCT TGT CAA GCT CTC CCC TAA TCT TTG CAA AAG TAT TTA GCT TTA TTA TAT TAA ATG TAG CAA TTT AAA AAT TTT TTT AAT TTA GGT GGA CCT GAA ATT AAA TAA ACT GAA GAT AAA AAA GCA ATG GAA GAA TTT AAA AAT GTA AAA ATA GAG GAT TAC GAA AGA GAA AAG ATG GAA AAT CTT CTC GCT GTA GTT AGT AAA TGG GAA AGG GAA GAT GCT TGA