Identifiers and Description

Gene Model Identifier

TTHERM_00283830

Standard Name

D2LIC

Aliases

PreTt04922 | 25.m00386 | 3694.m00169 | AY842288

Description

Light-intermediate chain subunit of non-axonemal dynein complex 2

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

GBrowse

Gene Ontology Annotations

Cellular Component

Molecular Function

Biological Process

Domains

  • ( PF00071 ) Ras family
  • ( PF08477 ) Miro-like protein
  • ( TIGR00231 ) small GTP-binding protein domain
  • ( PF05783 ) Dynein light intermediate chain (DLIC)

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.7%

TetraMine Data

TTHERM_00283830

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_09019.19.997093137033517e-262hypothetical protein (477 aa)
OxytrichaContig5466.0.g484.000437458487249e-40Dynein light intermediate chai
n (DLIC)
WormBaseWBGene000069604.9985000769285e-31locus:xbx-1 status:Partially
_confirmed UniProt:Q19119
protein_id:CAB01645.2
Stentor CoeruleusSteCoe_127626.305116760146989e-16
DictyBaseDDB_G02929040.000019995566179747357dync1li1 on chromosome: 6 posi
tion 2245112 to 2247070

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_00283830(coding)
ATGAACAGAAATTAGGAAGATAATGAATAAGAAAATAATGAAGTTAATAAGGGGGATAGG
AGTAATATTGACCTCTGGTCTCATGCTGAAGAATCGGAGTTGAAACAAGGATTTGCTAAA
AATTTAGAGAAAACTTTAGTCGTAATTGGTGATAAAGGAAGTGGCAAAACTACATTTGTT
AATATTTTGAAAAATATGCAGTAAGTAGATGATAGGTACATTCCCACTGTAGGTTTAGAT
TATTAGTATGTTAGAAGGACAAATGCAAATCGTAAAGAATTAATTCATAGCTATGAATTA
GGAGGTGGTAAAGAATAGAGTAAAATGATCACTATTCCAATTTCAAAATAAAATTTTAGA
GATGCATTTTATATATTGGTTCTTGATTTGTCAAAGCCTCATTAAATTATTGAATCAGCT
ACTTTTTGGTTCGAAGAAATACGCAGATAAATTGATTAGTTTAATTTGACAGCATTCACT
ACACCTGAAGAAAATGATTAAAGATCTAATTTTGAATTTGCCCAATAAGCAAGATTTGAA
TCACACCCTGATAAAAATAGAGTAAAAATTCTCCCAATTCAGACCATAGTAATAGGAATG
AAATATGATTTGTTTGAGAAAACTGATTCAGAAAATCGTAAATGGCTCACTCGTACTCTT
AGATATTTAGCCCATGTAAATGGGGCTTCTCTTTATTTTGCTTCTAGTAAAAACAATGAT
TTATTTTAGAATGTGAGATCTATTATGAATAATGCATTGTTTGGAAAAACTTTAGCTTAA
TACTATCAATCTGAGCATTTAAGACCTATTGAAATTAGTTTATCAAAAGATGAACTTGCT
AAAATGGGACTTCCTTAAATATCAGGAAACATGACCTACTTAGAGGCATTTAAGAAGGTT
ATACAAGAAACTTTCCCTGAGAATAAAGGTGCTTAAAACGATGCTTCATAAGATCCACTC
AGACTTATGGAAAAATTTCCTGAGGCAAGAATAGATTCCATCAGAGCAGAAAAGGATAAA
GAGATGAAAGCTATTTCTAAAGAATTTATGTCTTATTTTGATAACACTTCTCCTGTAAAG
CTGACTAAAAAATAGCTTTAATAAGAATACGAAGAATTGTTTGAAACTTCATAAAGTTAT
TAGCCCGACAGCTAAAATGAAATCTAATACTAAGACAATACTAACTACAAATAAGATTAA
AAATACACTGATAATACAAATCAAACCAGAATTAAACCAAATAATTAAACATCTACATAT
TAAGGTAGCGCTCCTCAGCCAATTGGTGGTAGTATAGATCCTTAAAGAGTAAATCCTTAT
ACTAAAAATACAGTACGTTCTAATTTAAAATAAACTAACTAAACTAGTAATCAAGGAGGA
ACTGGAAGATTATCAGGAATGGGAGGACTTCCAAATATAATCTGA


>TTHERM_00283830(protein)
MNRNQEDNEQENNEVNKGDRSNIDLWSHAEESELKQGFAKNLEKTLVVIGDKGSGKTTFV
NILKNMQQVDDRYIPTVGLDYQYVRRTNANRKELIHSYELGGGKEQSKMITIPISKQNFR
DAFYILVLDLSKPHQIIESATFWFEEIRRQIDQFNLTAFTTPEENDQRSNFEFAQQARFE
SHPDKNRVKILPIQTIVIGMKYDLFEKTDSENRKWLTRTLRYLAHVNGASLYFASSKNND
LFQNVRSIMNNALFGKTLAQYYQSEHLRPIEISLSKDELAKMGLPQISGNMTYLEAFKKV
IQETFPENKGAQNDASQDPLRLMEKFPEARIDSIRAEKDKEMKAISKEFMSYFDNTSPVK
LTKKQLQQEYEELFETSQSYQPDSQNEIQYQDNTNYKQDQKYTDNTNQTRIKPNNQTSTY
QGSAPQPIGGSIDPQRVNPYTKNTVRSNLKQTNQTSNQGGTGRLSGMGGLPNII


>TTHERM_00283830(gene)
ATGAACAGAAATTAGGAAGATAATGAATAAGAAAATAATGAAGTTAATAAGGGGGATAGG
AGTAATATTGACCTCTGGTCTCATGCTGAAGAATCGGAGTTGAAACAAGGATTTGCTAAA
AATTTAGAGAAAACTTTAGTCGTAATTGGTGATAAAGGAAGTGGCAAAACTACATTTGTT
AATATTTTGAAAAATATGCAGTAAGTAGATGATAGGTACATTCCCACTGTAGGTTTAGAT
TATTAGTATGTTAGAAGGACAAATGCAAATCGTAAAGAATTAATTCATAGCTATGAATTA
GGAGGTGGTAAAGAATAGAGTAAAATGATCACTATTCCAATTTCAAAATAAAATTTTAGA
GATGCATTTTATATATTGGTTCTTGATTTGTCAAAGCCTCATTAAATTATTGAATCAGCT
ACTTTTTGGTTCGAAGAAATACGCAGATAAATTGATTAGTTTAATTTGACAGCATTCACT
ACACCTGAAGAAAATGATTAAAGATCTAATTTTGAATTTGCCCAATAAGCAAGATTTGAA
TCACACCCTGATAAAAATAGAGTAAAAATTCTCCCAATTCAGACCATAGTAATAGGAATG
AAATATGATTTGTTTGAGAAAACTGATTCAGAAAATCGTAAATGGCTCACTCGTACTCTT
AGATATTTAGCCCATGTAAATGGGGCTTCTCTTTATTTTGCTTCTAGTAAGTAAGGATTT
GTCATTTAAGCCTAATTTTAAAATGATATATTTATCTTTTAAACAATATTTTCTTAAATC
TACTTCAGAATTAATTACCTTTATTTAATAAAACTAAATAGAATAATTTCTTTAGCAAAA
AAAATATTTTACGAAGCACATAAATTCATGTTTTATTTAATTAACATAATAAAAGAAACA
ATGATTTATTTTAGAATGTGAGATCTATTATGAATAATGCATTGTTTGGAAAAACTTTAG
CTTAATACTATCAATCTGAGCATTTAAGACCTATTGAAATTAGTTTATCAAAAGATGAAC
TTGCTAAAATGGGACTTCCTTAAATATCAGGAAACATGACCTACTTAGAGGCATTTAAGA
AGGTTATACAAGAAACTTTCCCTGAGAATAAAGGTGCTTAAAACGATGCTTCATAAGATC
CACTCAGACTTATGGAAAAATTTCCTGAGGCAAGAATAGATTCCATCAGAGCAGAAAAGG
ATAAAGAGATGAAAGCTATTTCTAAAGAATTTATGTCTTATTTTGATAACACTTCTCCTG
TAAAGCTGACTAAAAAATAGCTTTAATAAGAATACGAAGAATTGTTTGAAACTTCATAAA
GTTATTAGCCCGACAGCTAAAATGAAATCTAATACTAAGACAATACTAACTACAAATAAG
ATTAAAAATACACTGATAATACAAATCAAACCAGAATTAAACCAAATAATTAAACATCTA
CATATTAAGGTAGCGCTCCTCAGCCAATTGGTGGTAGTATAGATCCTTAAAGAGTAAATC
CTTATACTAAAAATACAGTACGTTCTAATTTAAAATAAACTAACTAAACTAGTAATCAAG
GAGGAACTGGAAGATTATCAGGAATGGGAGGACTTCCAAATATAATCTGA