Identifiers and Description

Gene Model Identifier

TTHERM_01043080

Standard Name

CYC4 (CYClin 4)

Aliases

PreTt03241 | 208.m00034 | 3807.m00207

Description

CYC4 amine-terminal domain cyclin; Cyclin- N-terminal domain containing protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.1%

TetraMine Data

TTHERM_01043080

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_20150.1	2.9995941501461703e-129	cyclin domain-containing prote in (470 aa)
Oxytricha	Contig19422.0.g4	3.9990760533890984e-36	Cyclin, N-terminal domain
DictyBase	DDB_G0275493	0.000000000029994712494008525	cycB on chromosome: 2 position 6000211 to 6001649
SGD	YGR109C	0.0000000000599805963605737	CLB6 B-type cyclin involved in DNA replication during S phas e; activates Cdc28p to promote initiation of DNA synthesis; functions in formation of mito tic spindles along with Clb3p and Clb4p; most abundant durin g late G1
WormBase	WBGene00000865	0.0000000006000548789370351	locus:cyb-1 G2/mitotic-speci fic cyclin-B1 status:Confirm ed UniProt:Q10653 protein_ id:CAA94384.1

General Information

No Data fetched for General Information

Associated Literature

1. Ref:27192402: Yan GX, Dang H, Tian M, Zhang J, Shodhan A, Ning YZ, Xiong J, Miao W (2016) Cyc17, a meiosis-specific cyclin, is essential for anaphase initiation and chromosome segregation in Tetrahymena thermophila. Cell cycle (Georgetown, Tex.) 15(14):1855-64

Sequences

>TTHERM_01043080(coding)
ATGTTCTGGTAAAAATTAGACACTAACTAAAAGCCTGTTATGTAGTAGAATAACATCAAT
AAAGTACTTTAACTTGATAACTAAAATAAATCTAAGTTAAACGACTAGTAATTCAACTGC
GCTCAATAAAAATGCAGCCAACCCTAATTATATAATCTCTCAGTAAAAGCTTGTGTATCT
AATGAAATTTAATCATCTGAAAATGCTTCAACTGATGGCTCTTCCTGTTCATAAAACATG
AATTCTGCTGATTCTTAGTAATCTGGCATCTAAAGTTATGAATGGATCGAAAGTTCTTAA
ACTACTGCCCCTGTTGAAATCTCTGGTCAAAGTACACTCTAAAAGACTTAAAGCAACGAA
GAAACCTTCTTCCCAAGAGTTTTTTCTAACAATATGATGGATGTCTAAGAACCAACTGAA
TTTTTAAAAAGACACGCAATCACTGCAGCAATGAGAGCTAAGATGATTGATTGGATGATT
GAAGTTCTTAAGGCTTACAATTTCTCCGAAACTACTTTCTCCCTTTCCGTTGCCATCATG
GATGCTTACTTCGCAAATGTATAAAGAAGTTTATAAGTTGATGAGCTCCATGCTATTGGT
ATTGTTAGCATGTTCATTGCTTCAAAATATGAAGAAATTGTACCCTTTTCATTATAAAAG
CTTTATGAGAAGATTGGTCACGAAAAGATCAGTATGTAAGTATTAAAATAGACTGAGGCA
GAAATCTTGAATACCCTTAATTTCAATATTTCCTTCCCTACCTTAGATATCTTATCAAAT
TTAATGATTAAGTATCTTGATTCTCAAGACTTCTTTAGCAGCTACACATAATAATCCAAA
GAGTTCTTCAATTGCTTAAACGCATACATGTTCAAGCTCACCACATTGGATTATGAATAA
TTAATGAGTAAATACAACTATAAAACCCTCGCAGTATGTTCTGTCTTTGTTTCAATCTAA
GTCATGCAATAGTTCTTCCCTTACTTTGATTAATTCAAATATGTATTACCCTTCCTTGAT
TTACTTGGAATGACCTACGACCAAATCATATAGCCTGCCTAAAGAATACTTACTTTAGCT
AAAACATACGATAAGCATTTCAGTAGCCTTAAAAACCTTAAAAAATACAATTTAGAAGAG
ATAAATAGAAAAACTTCTCGTTGTTTCAAAATTTGA

>TTHERM_01043080(protein)
MFWQKLDTNQKPVMQQNNINKVLQLDNQNKSKLNDQQFNCAQQKCSQPQLYNLSVKACVS
NEIQSSENASTDGSSCSQNMNSADSQQSGIQSYEWIESSQTTAPVEISGQSTLQKTQSNE
ETFFPRVFSNNMMDVQEPTEFLKRHAITAAMRAKMIDWMIEVLKAYNFSETTFSLSVAIM
DAYFANVQRSLQVDELHAIGIVSMFIASKYEEIVPFSLQKLYEKIGHEKISMQVLKQTEA
EILNTLNFNISFPTLDILSNLMIKYLDSQDFFSSYTQQSKEFFNCLNAYMFKLTTLDYEQ
LMSKYNYKTLAVCSVFVSIQVMQQFFPYFDQFKYVLPFLDLLGMTYDQIIQPAQRILTLA
KTYDKHFSSLKNLKKYNLEEINRKTSRCFKI

>TTHERM_01043080(gene)
ATGTTCTGGTAAAAATTAGACACTAACTAAAAGCCTGTTATGTAGTAGAATAACATCAAT
AAAGTACTTTAACTTGATAACTAAAATAAATCTAAGTTAAACGACTAGTAATTCAACTGC
GCTCAATAAAAATGCAGCCAACCCTAATTATATAATCTCTCAGTAAAAGCTTGTGTATCT
AATGAAATTTAATCATCTGAAAATGCTTCAACTGATGGCTCTTCCTGTTCATAAAACATG
AATTCTGCTGATTCTTAGTAATCTGGCATCTAAAGTTATGAATGGATCGAAAGTTCTTAA
ACTACTGCCCCTGTTGAAATCTCTGGTCAAAGTACACTCTAAAAGACTTAAAGCAACGAA
GAAACCTTCTTCCCAAGAGTTTTTTCTAACAATATGATGGTATTTTCAAATTATTATAGC
AATTTATTAAATTAACTAAATATCTTTTTAATATTAAAGGATGTCTAAGAACCAACTGAA
TTTTTAAAAAGACACGCAATCACTGCAGCAATGAGAGCTAAGATGATTGATTGGATGATT
GAAGTTCTTAAGGCTTACAATTTCTCCGAAACTACTTTCTCCCTTTCCGTTGCCATCATG
GATGCTTACTTCGCAAATGTATAAAGGTAAATAAACAAATAGTTTTGGATTCATCTTAAA
ATATAATTTTAGTTTTTTTCACCTTGCTCTAATTAAATAAATAAATACTTTAAATAATGT
ATTTTAAATTTATAAAAATCAGAAATAATTTTAAAATTTTAATTTTAATTTTATTTATTA
ATTAATTTATTACACTCTAAAAACTTATTGAAATAGATCAATTTTTGAGATAATTAATTG
AATATAATTATTTAACAACAACTCCAAAAATTTATAATTGAGGTTAGTTCCTAAAATTTT
AATTTAAAAGGCAAGCAAAAAAAAATGCTAAAGATATATAATCTTTATAAGCTTGTTAGA
ATAATTAACTAGCAAACATTCAATCACAAATATTAATTAATAAATAAATAAGATTAATTC
ATATATAATTTAGAAAGAATTAATAGAATATTTTTATCTGATGATTTTCAGACTTTAATT
AGAGTATTATAGAAGAAAACTATTTTTTTTAATCCAATAAACTAAATTTATTTTCATTAA
AAATAGAAGTTTATAAGTTGATGAGCTCCATGCTATTGGTATTGTTAGCATGTTCATTGC
TTCAAAATATGAAGAAATTGTACCCTTTTCATTATAAAAGCTTTATGAGAAGATTGGTCA
CGAAAAGATCAGTATGTAAGTATTAAAATAGACTGAGGCAGAAATCTTGAATACCCTTAA
TTTCAATATTTCCTTCCCTACCTTAGATATCTTATCAAATTTAATGATTAAGTATCTTGA
TTCTCAAGACTTCTTTAGCAGCTACACATAATAATCCAAAGAGTTCTTCAATTGCTTAAA
CGCATACATGTTCAAGCTCACCACATTGGATTATGAATAATTAATGAGTAAATACAACTA
TAAAACCCTCGCAGTATGTTCTGTCTTTGTTTCAATCTAAGTCATGCAATAGTTCTTCCC
TTACTTTGATTAATTCAAATATGTATTACCCTTCCTTGATTTACTTGGAATGACCTACGA
CCAAATCATATAGCCTGCCTAAAGAATACTTACTTTAGCTAAAACATACGATAAGCATTT
CAGTAGCCTTAAAAACCTTAAAAAATACAATTTAGAAGAGATAAATAGAAAAACTTCTCG
TTGTTTCAAAATTTGA