Identifiers and Description
Gene Model Identifier
TTHERM_00590200Standard Name
CLP1Aliases
PreTt24135 | 81.m00192 | 3726.m00068Description
CLP1 Pre-mRNA cleavage complex II protein Clp1 putative; pre-mRNA cleavage complex II proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
No Data fetched for Domains
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 9.8%
TetraMine Data
TTHERM_00590200
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_16966.1 9.997093137033517e-262 hypothetical protein (505 aa)
Oxytricha Contig11030.0.g71 4.000437458487249e-40 Molybdopterin guanine dinucleo
tide synthesis protein B
WormBase WBGene00010304 3.999970367130025e-21 locus:clpf-1 Protein clpf-1
status:Confirmed UniProt:P
52874 protein_id:CAA84329.1
DictyBase DDB_G0285507 2.000769134519826e-18 clp1 on chromosome: 4 position
3327387 to 3328942
SGD YOR250C 0.00000000030007160092483236 CLP1 Subunit of cleavage facto
r I (CFI), involved in both th
e endonucleolyitc cleavage and
polyadenylation steps of mRNA
3-end maturation
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00590200(coding)
ATGATGGAAGAATAGTTCATATGCGATGAAAAAAAGTTTATTAGATAGGAGGTAGAAAAA
ATGAGGGAATTTTCATTTAACATAAATAATGAAGATGGTTTAAAACTCTTTCTGAAAGAG
GGTACTGCTGAAATCTTCGGTAGAGAATTACCACAATATACAATTTAATAATTTTAAAAG
GGAGATCGTTTTTCAATATTTACATGGACAGGCTGTGTACTCTATTTAGAATATATGAGT
CATTCTGACTTCTTTTAGTCTACAGATGAGTCACAGTATCCCATATATGCAAACATAAAT
TAATATTTACACGAAATGAGATCATAAGCATAAGATTAGCGTAAAATAGGCCCTAAAATT
TTAATATGTGGACCAAACTAAAGTGGAAAAACAACTGTTTCAAAGACACTGACTAACTAT
TGCTGTAAGCTGGGATGGACTCCTATTTTAGTTGATTTAGACCCTATGCTTAATACAGTG
ATGGCAGGAGGATGTATTGGAGCTTGTGTCTGCAAAGACTCTTATCCTACAAATGGAATA
GAAATTAAAAATAAAATTATATTCTTTCATGGATACAGTCGCATTCAATTAGGCCTTCTT
AAGAATTAGATAGAAGTCTTAGGAAACACAGTTCAAAAAAAGCTCTAAAATAACTTAGAA
TAATTCCTTAAAAAGCATAACTTGCAAACTGCTCCAGATGCAGAAGGAGCCTAACAGAAG
ACCAACAAATAAAAATATCCATCGTAATAAAATATTTAAAACTCAACTGCATAGATTAAA
CTACCATCAGGTGTCAACATAAATTAAATGCTGTTACTCCCTTAAGACAAGCAAATGTTT
TCAAGTGGATGCATAATTAATATGCCTCCTCTCTAATCTAGAGAATAGAAAGAAGTTATT
GACCTTATCATAAAACATTTTCAAGTTGATGTGATAATTGGTCTAGACGATTAAGTATTT
AATTCTTTAAAGCAAAACTAGCTTTTGACTAATGGATATAGTGTTATACGTACCACAAAA
CCTTCAGGATTAAAAACTAAAGAAGAGTCAGAGCTAGTTGAGGAAGCTAGAAAAATAAAT
TAAAAGCTCTTTTAATAGTACTTTAAAGGACTTAATAATGACATTGATTGTCATAATTAA
GAAGTTAACTTAAATGATTTACTTGTTTATAGATTAAAAATAAATGAAAAAAATAGCTTA
GCAAATACTTCAATGTAATAATAAAAGCAAATTTATGAAAGAGTTGATCTTTCCAAAGAA
AATGTGACAAAGAGTATAGTTGGCGTACTAAACCTTACAAGATCCTCTGTTGAAAAATTA
AAAGAAGAAGAAATATTTGAAAAAATATCTAAAAGTACTCTCAGTCTTTTGGTTCATTTA
TCAGATATGAGAACAAACCAGCCCTATGTACGTTTGTTTTTACCTGGGCTAAATATGGAA
AATATAATTAAAGAAAATGTATGTGTAATAGGAGACATAACATGGTTTGAATCATCAAGT
GATAAAAAAAAATGA>TTHERM_00590200(protein)
MMEEQFICDEKKFIRQEVEKMREFSFNINNEDGLKLFLKEGTAEIFGRELPQYTIQQFQK
GDRFSIFTWTGCVLYLEYMSHSDFFQSTDESQYPIYANINQYLHEMRSQAQDQRKIGPKI
LICGPNQSGKTTVSKTLTNYCCKLGWTPILVDLDPMLNTVMAGGCIGACVCKDSYPTNGI
EIKNKIIFFHGYSRIQLGLLKNQIEVLGNTVQKKLQNNLEQFLKKHNLQTAPDAEGAQQK
TNKQKYPSQQNIQNSTAQIKLPSGVNINQMLLLPQDKQMFSSGCIINMPPLQSREQKEVI
DLIIKHFQVDVIIGLDDQVFNSLKQNQLLTNGYSVIRTTKPSGLKTKEESELVEEARKIN
QKLFQQYFKGLNNDIDCHNQEVNLNDLLVYRLKINEKNSLANTSMQQQKQIYERVDLSKE
NVTKSIVGVLNLTRSSVEKLKEEEIFEKISKSTLSLLVHLSDMRTNQPYVRLFLPGLNME
NIIKENVCVIGDITWFESSSDKKK>TTHERM_00590200(gene)
ATGATGGAAGAATAGTTCATATGCGATGAAAAAAAGTTTATTAGATAGGAGGTAGAAAAA
ATGAGGGAATTTTCATTTAACATAAATAATGAAGATGGTTTAAAACTCTTTCTGAAAGAG
GGTACTGCTGAAATCTTCGGTAGAGAATTACCACAATATACAATTTAATAATTTTAAAAG
GGAGATCGTTTTTCAATATTTACATGGACAGGCTGTGTACTCTATTTAGAATATATGAGT
CATTCTGACTTCTTTTAGTCTACAGATGAGTCACAGTATCCCATATATGCAAACATAAAT
TAATATTTACACGAAATGAGATCATAAGCATAAGATTAGCGTAAAATAGGCCCTAAAATT
TTAATATGTGGACCAAACTAAAGTGGAAAAACAACTGTAAGTACTTCTTATTGATTTTCA
TTCAGTGATTGAATACTTAATATTTTAGTTAGAGCAAATTATATTATAAATGAAGATAAA
TTTGAGTAAATCTTTCGCTTGCATAGCAGCGAGAGAGTATTAAATTCATTTATTTTTGTT
ATAATTATTAGGTTTCAAAGACACTGACTAACTATTGCTGTAAGCTGGGATGGACTCCTA
TTTTAGTTGATTTAGACCCTATGCTTAATACAGTGATGGCAGGAGGATGTATTGGAGCTT
GTGTCTGCAAAGACTCTTATCCTACAAATGGAATAGAAATTAAAAATAAAATTATATTCT
TTCATGGATACAGTCGCATTCAATTAGGCCTTCTTAAGAATTAGATAGAAGTCTTAGGAA
ACACAGTTCAAAAAAAGCTCTAAAATAACTTAGAATAATTCCTTAAAAAGCATAACTTGC
AAACTGCTCCAGATGCAGAAGGAGCCTAACAGAAGACCAACAAATAAAAATATCCATCGT
AATAAAATATTTAAAACTCAACTGCATAGATTAAACTACCATCAGGTGTCAACATAAATT
AAATGCTGTTACTCCCTTAAGACAAGCAAATGTTTTCAAGTGGATGCATAATTAATATGC
CTCCTCTCTAATCTAGAGAATAGAAAGAAGTTATTGACCTTATCATAAAACATTTTCAAG
TTGATGTGATAATTGGTCTAGACGATTAAGTATTTAATTCTTTAAAGCAAAACTAGCTTT
TGACTAATGGATATAGTGTTATACGTACCACAAAACCTTCAGGATTAAAAACTAAAGAAG
AGTCAGAGCTAGTTGAGGAAGCTAGAAAAATAAATTAAAAGCTCTTTTAATAGTACTTTA
AAGGACTTAATAATGACATTGAGTATTTTTTTTTTCATTCATTCATTTTTTCTTTAAAAA
TTTTTAAGCTAAATCAAAATAAATTCATCATAAAAGTCTTTCAATTTATAAATTTTCTAA
CAATTTAATCTTTATGAAATGCTAATTTTAAGTCTCCTAATAAGATTACTAAAATAATTT
TATGAATAAGCAATAAATAAACTTCATACATAAAAATATTTAATTAATTAAATTCTAAAA
AATTAGGTTTTTTATATAAATTGCTTATATTTTTAATTAAGCAAAAGATTTATTTAAATA
TTTAATTATGTTTGAATAAACTCTTATATTTGCTTCAATTTAAGATGATTTTATTTTTGA
TATTTCAATTTCCAAATAAATTTAACGATTTTTAAGATATTTTAATAAAATTTTTATATT
ATAAAATAGTTGTCATAATTAAGAAGTTAACTTAAATGATTTACTTGTTTATAGATTAAA
AATAAATGAAAAAAATAGCTTAGCAAATACTTCAATGTAATAATAAAAGCAAATTTATGA
AAGAGTTGATCTTTCCAAAGAAAATGTGACAAAGAGTATAGTTGGCGTACTAAACCTTAC
AAGATCCTCTGTTGAAAAATTAAAAGAAGAAGAAATATTTGAAAAAATATCTAAAAGTAC
TCTCAGTCTTTTGGTTCATTTATCAGATATGAGAACAAACCAGCCCTATGTACGTTTGTT
TTTACCTGGGCTAAATATGGAAAATATAATTAAAGAAAATGTATGTGTAATAGGAGACAT
AACATGGTTTGAATCATCAAGTGATAAAAAAAAATGA