Identifiers and Description

Gene Model Identifier

TTHERM_01002860

Standard Name

CCF3 (C-terminal Crystallin Fold)

Aliases

PreTt17206 | 191.m00066 | 3761.m00258

Description

C-terminal crystallin fold protein; domain structure and protein isolation suggest localization in dense core granules; contains additional tandem copies of a 150-residue motif shared by CCF3, CCF4, GRT1, and GRT2

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

Cellular Component

• dense core granule (IDA) | GO:0031045 | Ref:16014006

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: Yes
Presense Probability: 83.8%

TetraMine Data

TTHERM_01002860

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_19854.1	9.997093137033517e-262	hypothetical protein (437 aa)

General Information

No Data fetched for General Information

Associated Literature

1. Ref:16014006: Bowman GR, Smith DG, Michael Siu KW, Pearlman RE, Turkewitz AP (2005) Genomic and proteomic evidence for a second family of dense core granule cargo proteins in Tetrahymena thermophila. The Journal of eukaryotic microbiology 52(4):291-7

Sequences

>TTHERM_01002860(coding)
ATGTAAAAAGGATACATCTTAGTAGCCTTACTTTTAGTAGGTTTTGCTTCCGCTAACTTC
TACGAAGTTGCCAAGGAATTCACTCTCAATAACTTCAATTCCAAATCTCTTAGCAGTTGG
AATCTTGTTAACTTCAAGGGAGATTAAGTCGCCAATTGCAATGGTGTTTCTGTTGTTGGT
GGTCCCAGCGTCGTTGCCAGTGGTTCAATGACCAAAACTTTCACAACTGATTTTGATCTC
AACGGAGTTAATATCTCTTTCGACTTATATTTCTTTGATAAATGGTTCTCTGGTTGGGAT
GGTGGTAGAGATTAGAACACCTTGTTCAAGATCTTCGTTAATAACCAATAAGTTTACCAA
CTTGGTTCTGATTACACCAGATCCCTCCATGCTGATTAACCCAATCTTTGTGGTGATGCT
ACTCCTGATAGATAAACTCACATTTCTCTTGATGTCCCCGCTACTGGTAGAAACATCACT
GTCTAACTTGTTGCCAACATCGCTTCCAATAATCCTGCAGTTGCCTCTTGGGGTATCAGA
AATTTCTACATTTTATCATAATAAGGTTATGATGATTCTTAAGTTGTTGTTAGTGAACTC
AATGATGATTCCAATTTCGATGTTTCTCAATGGTAAACAAATTTCAAAGGTGTAATCACA
TAATGCCCTTCAAAGCTCCTTGGTGGTTACAATGCTGCTGGACCTAAAGCCACTGCTGTT
AGAAAACTCGCAAGTCTCCCTGCTCACTCCTTCTTGACTGTTTCCCTCAGTGCTTATTTC
ATTGATTCCATTGATGCTAATGATTCAGTTGTTATTTACGTTGATGGAAAGGTTGCCCAT
GAACACTAAAAGGCTTATTATGAAGATAGTACTAATGTTTGCGGTGCTGCCTGGAACGAC
GGTGTTGATAATGAATTAAATATCATTGTTCCTCACTTTGCTTCTACTGCTGAAATCAAA
ATTTACGTCAATACTGACCAAGCTCCTGGTGATGAATCCTTCGGTTTCAGAGAATTCTAA
GTTTCTGTTTCTTCTCCCTGTCCTATTCTCTACACTGATGTTAATCAAGGAGGTAGACAA
TTCTCCTTCTGTGGTAATCTTCCTGATCTCAAGGCTGTTGGTTGGACCGCTCCTATTAAA
GGTATTTACCTTCCCAAGGGAGTTGAACTCACTGTCTACTAAGATTCTAACTACAATGGA
AAGAAATACACTGTTAAGAAATCTAACTTCAATCTCTCAGGTAATGAATACTAATTGATT
AACAAAGCTTTAAACATTGATGTTACTGAATAAAAGCTTAGACGTAACAAGTGA

>TTHERM_01002860(protein)
MQKGYILVALLLVGFASANFYEVAKEFTLNNFNSKSLSSWNLVNFKGDQVANCNGVSVVG
GPSVVASGSMTKTFTTDFDLNGVNISFDLYFFDKWFSGWDGGRDQNTLFKIFVNNQQVYQ
LGSDYTRSLHADQPNLCGDATPDRQTHISLDVPATGRNITVQLVANIASNNPAVASWGIR
NFYILSQQGYDDSQVVVSELNDDSNFDVSQWQTNFKGVITQCPSKLLGGYNAAGPKATAV
RKLASLPAHSFLTVSLSAYFIDSIDANDSVVIYVDGKVAHEHQKAYYEDSTNVCGAAWND
GVDNELNIIVPHFASTAEIKIYVNTDQAPGDESFGFREFQVSVSSPCPILYTDVNQGGRQ
FSFCGNLPDLKAVGWTAPIKGIYLPKGVELTVYQDSNYNGKKYTVKKSNFNLSGNEYQLI
NKALNIDVTEQKLRRNK

>TTHERM_01002860(gene)
TAATTATCAATACAAATACATTAAAAAGAAACATTATTAAAAATGTAAAAAGGATACATC
TTAGTAGCCTTACTTTTAGTAGGTTTTGCTTCCGCTAACTTCTACGAAGTTGCCAAGGAA
TTCACTCTCAATAACTTCAATTCCAAATCTCTTAGCAGTTGGAATCTTGTTAACTTCAAG
GGAGATTAAGTCGCCAATTGCAATGGTGTTTCTGTTGTTGGTGGTCCCAGCGTCGTTGCC
AGTGGTTCAATGACCAAAACTTTCACAACTGATTTTGATCTCAACGGAGTTAATATCTCT
TTCGACTTATATTTCTTTGATAAATGGTTCTCTGGTTGGGATGGTGGTAGAGATTAGAAC
ACCTTGTTCAAGATCTTCGTTAATAACCAATAAGTTTACCAACTTGGTTCTGATTACACC
AGATCCCTCCATGCTGATTAACCCAATCTTTGTGGTGATGCTACTCCTGATAGATAAACT
CACATTTCTCTTGATGTCCCCGCTACTGGTAGAAACATCACTGTCTAACTTGTTGCCAAC
ATCGCTTCCAATAATCCTGCAGTTGCCTCTTGGGGTATCAGAAATTTCTACATTTTATCA
TAATAAGGTTATGATGATTCTTAAGTTGTTGTTAGTGAACTCAATGATGATTCCAATTTC
GATGTTTCTCAATGGTAAACAAATTTCAAAGGTGTAATCACATAATGCCCTTCAAAGCTC
CTTGGTGGTTACAATGCTGCTGGACCTAAAGCCACTGCTGTTAGAAAACTCGCAAGTCTC
CCTGCTCACTCCTTCTTGACTGTTTCCCTCAGTGCTTATTTCATTGATTCCATTGATGCT
AATGATTCAGTTGTTATTTACGTTGATGGAAAGGTTGCCCATGAACACTAAAAGGCTTAT
TATGAAGATAGTACTAATGTTTGCGGTGCTGCCTGGAACGACGGTGTTGATAATGAATTA
AATATCATTGTTCCTCACTTTGCTTCTACTGCTGAAATCAAAATTTACGTCAATACTGAC
CAAGCTCCTGGTGATGAATCCTTCGGTTTCAGAGAATTCTAAGTTTCTGTTTCTTCTCCC
TGTCCTATTCTCTACACTGATGTTAATCAAGGAGGTAGACAATTCTCCTTCTGTGGTAAT
CTTCCTGATCTCAAGGCTGTTGGTTGGACCGCTCCTATTAAAGGTATTTACCTTCCCAAG
GGAGTTGAACTCACTGTCTACTAAGATTCTAACTACAATGGAAAGAAATACACTGTTAAG
AAATCTAACTTCAATCTCTCAGGTAATGAATACTAATTGATTAACAAAGCTTTAAACATT
GATGTTACTGAATAAAAGCTTAGACGTAACAAGTGA