Identifiers and Description
Gene Model Identifier
TTHERM_00095540Standard Name
CBF5 (Centromere Binding Factor 5)Aliases
PreTt22853 | 7.m00302Description
CBF5 tRNA pseudouridine synthase; Putative rRNA pseudouridine synthaseGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Molecular Function
- RNA binding (IEA) | GO:0003723
Biological Process
- RNA processing (IEA) | GO:0006396
Domains
- ( PF01472 ) PUA domain
- ( PF00831 ) ribosomal protein L29
- ( PF08068 ) DKCLD (NUC011) domain
- ( TIGR00012 ) ribosomal protein L29
- ( TIGR00451 ) uncharacterized domain 2
- ( TIGR00431 ) tRNA pseudouridine synthase B
- ( TIGR00425 ) rRNA pseudouridine synthase, putative
- ( PF08660 ) Oligosaccharide biosynthesis protein Alg14 like
- ( PF01509 ) TruB family pseudouridylate synthase (N
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.1%
TetraMine Data
TTHERM_00095540
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Stentor Coeruleus SteCoe_38151 0 WormBase WBGene00010478 9.997093137033517e-262 Putative H/ACA ribonucleoprote
in complex subunit 4 status:
Confirmed UniProt:O17919 p
rotein_id:CAB07244.1
Tetrahymena borealis EI9_00259.1 9.997093137033517e-262 rRNA pseudouridine synthase, f
amily protein (426 aa)
DictyBase DDB_G0281933 9.997093137033517e-262 nola4 on chromosome: 3 positio
n 5161271 to 5163028
Oxytricha Contig17910.0.g6 9.997093137033517e-262 DKCLD (NUC011) domain
SGD YLR175W 9.997093137033517e-262 CBF5 Pseudouridine synthase ca
talytic subunit of box H/ACA s
mall nucleolar ribonucleoprote
in particles (snoRNPs), acts o
n both large and small rRNAs a
nd on snRNA U2; mutations in h
uman ortholog dyskerin cause t
he disorder dyskeratosis conge
nita
General Information
No Data fetched for General Information
Associated Literature
No Data fetched for Associated Literature
Sequences
>TTHERM_00095540(coding)
ATGGGTAAAGATAAGAAGAAGCAAAGAAAGCAATCAAGCGAAGTTGCTGAAGTTGAAGAG
CAAGTCGTCGCTTAAGATTTTATTAAACCTTCCAAGGGAGGCGCTAAGTTGGATGCTAGC
CAATGGCCCTTATTATTAAAGAATTACGATAAGATGAACATCAGATCATCTCACTACACC
CCCATTCCTAACGGATCTAACCCCCTAGCTAGACCCATGGAAGAACATTTAAAATATGGT
GTTATGAATTTGGATAAGCCTTCTAACCCCTCTTCTCACGAAGTTGTCGCATGGGTTAAG
AAGTTGTTCGAAAATATCACTAAGATGGAAAAGACCGGTCACTCTGGTACCCTTGATCCT
AAGGTTACTGGTTGTTTGATCGTTTGTTTGAACCGTGCTACTAGATTGGTTAAGGCTCAA
TAGAGCGCTGGTAAGGAATACGTTGGTATTGTTAGACTCCACAACGATATTGAATCCGAA
CTCAAGCTCGCTAAGGCCCTCCAACAATTGACTGGTCCCCTTTTCCAAAAGCCCCCTCTT
ATTTCCGCTGTCAAGAGAGAATTGAGAGTTAGAACTATTTATGAATCTAAGTTAATTGAA
TACAATCCCGAAAAGAAGATGGGTATCATCTGGATGAGTTGCGAAGCTGGTACTTACGTT
AGAACCCTCTGTGTCCACTTAGGTCTCTTACTCGGTACTGGTGGTCATATGGAAGAACTT
AGAAGAGTTCGTTCTGGTATCCTCGACGAAAACTAATATCTCGTCACCATGCACGACGTC
AAGGACTCTATCTGGAGATATCAACACTTCAAGGATGAATCTTATCTCAGACGTGTTGTT
TTACCTCTTGAAGTTTTACTTACTAGTTTCCCTCGTATTGTCGTTAAGGATTCTACCGTT
AACTCTATCTGTTATGGTGCTAAGCTCATGCTCCCTGGTGTCCTCCGTTATGACAACAAC
ATTGAAAACGGTAAGGAAGTAGTTTTGATCACCACCAAGGGTGAAGCTATCGCTGTTGCT
GTTGCTTAAATGACCACCTCCGAACTCGCCACCTGCGATCACGGTATCGTCTGCAAGACC
AAGAGAGTTATTATGGACAGAGACCTCTATCCCAAGAGATGGGGTTTGGGTCCTAGAGCC
TTAAGAAAGAAAAACCTCATCAAGGAAGGTCTCTTAGATAAGCACGGAAAGCCCAACGAT
TAAACACCTAACGACTGGACTGTTTTCTACGTTAATGAAGAAAATAACAACATCCCCAAG
CCTGAAGAAAATTGA>TTHERM_00095540(protein)
MGKDKKKQRKQSSEVAEVEEQVVAQDFIKPSKGGAKLDASQWPLLLKNYDKMNIRSSHYT
PIPNGSNPLARPMEEHLKYGVMNLDKPSNPSSHEVVAWVKKLFENITKMEKTGHSGTLDP
KVTGCLIVCLNRATRLVKAQQSAGKEYVGIVRLHNDIESELKLAKALQQLTGPLFQKPPL
ISAVKRELRVRTIYESKLIEYNPEKKMGIIWMSCEAGTYVRTLCVHLGLLLGTGGHMEEL
RRVRSGILDENQYLVTMHDVKDSIWRYQHFKDESYLRRVVLPLEVLLTSFPRIVVKDSTV
NSICYGAKLMLPGVLRYDNNIENGKEVVLITTKGEAIAVAVAQMTTSELATCDHGIVCKT
KRVIMDRDLYPKRWGLGPRALRKKNLIKEGLLDKHGKPNDQTPNDWTVFYVNEENNNIPK
PEEN>TTHERM_00095540(gene)
ATGGGTAAAGATAAGAAGAAGCAAAGAAAGCAATCAAGCGAAGTTGCTGAAGTTGAAGAG
CAAGTCGTCGCTTAAGATTTTATTAAACCTTCCAAGGGAGGCGCTAAGTTGGATGCTAGC
CAATGGCCCTTATTATTAAAGAATTACGATAAGATGAACATCAGATCATCTCACTACACC
CCCATTCCTAACGGATCTAACCCCCTAGCTAGACCCATGGAAGAACATTTAAAATATGGT
GTTATGAATTTGGATAAGCCTTCTAACCCCTCTTCTCACGAAGTTGTCGCATGGGTTAAG
AAGTTGTTCGAAAATATCACTAAGATGGAAAAGACCGGTCACTCTGGTACCCTTGATCCT
AAGGTTACTGGTTGTTTGATCGTTTGTTTGAACCGTGCTACTAGATTGGTTAAGGCTCAA
TAGAGCGCTGGTAAGGAATACGTTGGTATTGTTAGACTCCACAACGATATTGAATCCGAA
CTCAAGCTCGCTAAGGCCCTCCAACAATTGACTGGTCCCCTTTTCCAAAAGCCCCCTCTT
ATTTCCGCTGTCAAGAGAGAATTGAGAGTTAGAACTATTTATGAATCTAAGTTAATTGAA
TACAATCCCGAAAAGAAGATGGGTATCATCTGGATGAGTTGCGAAGCTGGTACTTACGTT
AGAACCCTCTGTGTCCACTTAGGTCTCTTACTCGGTACTGGTGGTCATATGGAAGAACTT
AGAAGAGTTCGTTCTGGTATCCTCGACGAAAACTAATATCTCGTCACCATGCACGACGTC
AAGGACTCTATCTGGAGATATCAACACTTCAAGGATGAATCTTATCTCAGACGTGTTGTT
TTACCTCTTGAAGTTTTACTTACTAGTTTCCCTCGTATTGTCGTTAAGGATTCTACCGTT
AACTCTATCTGTTATGGTGCTAAGCTCATGCTCCCTGGTGTCCTCCGTTATGACAACAAC
ATTGAAAACGGTAAGGAAGTAGTTTTGATCACCACCAAGGGTGAAGCTATCGCTGTTGCT
GTTGCTTAAATGACCACCTCCGAACTCGCCACCTGCGATCACGGTATCGTCTGCAAGACC
AAGAGAGTTATTATGGACAGAGACCTCTATCCCAAGAGATGGGGTTTGGGTCCTAGAGCC
TTAAGAAAGAAAAACCTCATCAAGGAAGGTCTCTTAGATAAGCACGGAAAGCCCAACGAT
TAAACACCTAACGACTGGACTGTTTTCTACGTTAATGAAGAAAATAACAACATCCCCAAG
CCTGAAGAAAATTGA