Identifiers and Description
Gene Model Identifier
TTHERM_00529810Standard Name
Brop-4 (Bromodomain containing protein 4)Aliases
PreTt04650 | 67.m00165 | 3684.m00035Description
bromodomain proteinGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
No Data fetched for Gene Ontology Annotations
Domains
- ( PF00439 ) Bromodomain
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.1%
TetraMine Data
TTHERM_00529810
WebApollo
Fullscreen View
Tetrahymena Stock Center
No Data fetched for StockID
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_13669.1 7.996964956232603e-130 bromodomain containing protein
(288 aa)
Oxytricha Contig18584.0.g108 7.003307964816097e-28 Bromodomain
WormBase WBGene00022473 4.997543945741262e-17 locus:bet-1 status:Partially
_confirmed UniProt:Q95Y80
protein_id:CCD68309.1
SGD YDL070W 9.997764199084386e-16 BDF2 Protein involved in trans
cription initiation at TATA-co
ntaining promoters; associates
with the basal transcription
factor TFIID; contains two bro
modomains; corresponds to the
C-terminal region of mammalian
TAF1; redundant with Bdf1p
DictyBase DDB_G0293800 0.000000000007996637300921877 DDB_G0293800 on chromosome: 6
position 3334534 to 3337072
Stentor Coeruleus SteCoe_29693 0.000000000013887943864964021
General Information
No Data fetched for General Information
Associated Literature
- Ref:29523178: Saettone A, Garg J, Lambert JP, Nabeel-Shah S, Ponce M, Burtch A, Thuppu Mudalige C, Gingras AC, Pearlman RE, Fillingham J (2018) The bromodomain-containing protein Ibd1 links multiple chromatin-related protein complexes to highly expressed genes in Tetrahymena thermophila. Epigenetics & chromatin 11(1):10
Sequences
>TTHERM_00529810(coding)
ATGGATAAATAAGTATAAAGTGAATGCAGTAAAGTTTTGAAATAGCTGCTTAAGTTACCA
GAATCATATCCTTTTAGAGAACCAGTCGATTATGAATAATTATAGTTATTTGATTACCCT
GATATTATAAAAAATCCTATGGATTTAGGCACGATAGAATAAAACTTAAAAGCAAAAAAA
TATAAATAGCCTAAAGACTTCTTTGATGACATATTTTTAGTGTGGAATAATTGTAAAATG
TACAATCAAGATGGATCTAACATTTATTAGTAAGCTTTAAATATGGAAAAAGCTACTAAT
GCTGCTAAATATGCTTTTGAATAGTCCTTAAAAAAGCTAAATTAAACCTAAGCACAAGCA
ACATAAAACCAATCTTCTTCAGCTGGCATAGCTGGTAAGTAAAAAAAGACAGAAAAATCA
GTTAGTTCATCTATAATTAAAAAGAAAATCCATAAAAACAAAGAAGGAAGCAGTAGCATT
ACAGTAAATACTAATACAAACGTGAATGTAGCATCAGGAAATAATAATAATGGAAATAAC
AATAATACTTAATATTAACAATAATAAAATGTCTAGAGTGTATAATATAGTAAAAAAGAA
AGGCAACCACCTGTCAATAAAAATGAATAATAGTAAGAAAAATATGCTAATTAGCAAGAA
AGAAAATATGCTCATATATCACTTAGATTAAATTTAGCTTTTAAATTAAAAAATGCTACA
GAAGATAAGTTAGTAAATTTATTTGCTATGCTTGCAGAAAAACACCCTGAAACACTTTCA
AATATAGAAAATAGAGAACAAAAGCTCTCTATGAATTTGACCTAGTTACCTGATCAAACT
ATTTAAAATATGATAGCAGCATTAGAATTCAAAGATTGA>TTHERM_00529810(protein)
MDKQVQSECSKVLKQLLKLPESYPFREPVDYEQLQLFDYPDIIKNPMDLGTIEQNLKAKK
YKQPKDFFDDIFLVWNNCKMYNQDGSNIYQQALNMEKATNAAKYAFEQSLKKLNQTQAQA
TQNQSSSAGIAGKQKKTEKSVSSSIIKKKIHKNKEGSSSITVNTNTNVNVASGNNNNGNN
NNTQYQQQQNVQSVQYSKKERQPPVNKNEQQQEKYANQQERKYAHISLRLNLAFKLKNAT
EDKLVNLFAMLAEKHPETLSNIENREQKLSMNLTQLPDQTIQNMIAALEFKD>TTHERM_00529810(gene)
ATGGATAAATAAGTATAAAGTGAATGCAGTAAAGTTTTGAAATAGCTGCTTAAGTTACCA
GAATCATATCCTTTTAGAGAACCAGTCGATTATGAATAATTATAGTTATTTGATTACCCT
GATATTATAAAAAATCCTATGGATTTAGGCACGATAGAATAAAACTTAAAAGCAAAAAAA
TATAAATAGCCTAAAGACTTCTTTGATGACATATTTTTAGTGTGGAATAATTGTAAAATG
TACAATCAAGATGGATCTAACATTTATTAGTAAGCTTTAAATATGGAAAAAGCTACTAAT
GCTGCTAAATATGCTTTTGAATAGTCCTTAAAAAAGCTAAATTAAACCTAAGCACAAGCA
ACATAAAACCAATCTTCTTCAGCTGGCATAGCTGGTAAGTAAAAAAAGACAGAAAAATCA
GTTAGTTCATCTATAATTAAAAAGAAAATCCATAAAAACAAAGAAGGAAGCAGTAGCATT
ACAGTAAATACTAATACAAACGTGAATGTAGCATCAGGAAATAATAATAATGGAAATAAC
AATAATACTTAATATTAACAATAATAAAATGTCTAGAGTGTATAATATAGTAAAAAAGAA
AGGCAACCACCTGTCAATAAAAATGAATAATAGTAAGAAAAATATGCTAATTAGCAAGAA
AGAAAATATGCTCATATATCACTTAGATTAAATTTAGCTTTTAAATTAAAAAATGCTACA
GAAGATAAGTTAGTAAATTTATTTGCTATGCTTGCAGAAAAACACCCTGAAACACTTTCA
AATATAGAAAATAGAGAACAAAAGCTCTCTATGAATTTGACCTAGTTACCTGATCAAACT
ATTTAAAATATGATAGCAGCATTAGAATTCAAAGATTGA