Identifiers and Description

Gene Model Identifier

TTHERM_00146040

Standard Name

Brop-3 (Bromodomain containing protein 3)

Aliases

PreTt26811 | 11.m00508 | 3702.m00230

Description

Bromodomain containing protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00439 ) Bromodomain

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 11.9%

TetraMine Data

TTHERM_00146040

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_04669.1	1.999807452113044e-171	bromodomain containing protein (310 aa)
Oxytricha	Contig18584.0.g108	0.00000000000009996062864481225	Bromodomain
SGD	YGR252W	0.000000000040005666873964816	GCN5 Acetyltransferase, modifi es N-terminal lysines on histo nes H2B and H3; acetylates Rsc 4p, a subunit of the RSC chrom atin-remodeling complex, alter ing replication stress toleran ce; catalytic subunit of the A DA and SAGA histone acetyltran sferase complexes; founding me mber of the Gcn5p-related N-ac etyltransferase superfamily; m utant displays reduced transcr iption elongation in the G-les s-based run-on (GLRO) assay
WormBase	WBGene00007256	0.0000000000499999055251093	locus:swsn-9 status:Confirme d UniProt:Q17581 protein_i d:CAA95779.1
DictyBase	DDB_G0274581	0.000000100009565553302	DDB_G0274581 on chromosome: 2 position 3871056 to 3872872

General Information

No Data fetched for General Information

Associated Literature

1. Ref:29523178: Saettone A, Garg J, Lambert JP, Nabeel-Shah S, Ponce M, Burtch A, Thuppu Mudalige C, Gingras AC, Pearlman RE, Fillingham J (2018) The bromodomain-containing protein Ibd1 links multiple chromatin-related protein complexes to highly expressed genes in Tetrahymena thermophila. Epigenetics & chromatin 11(1):10

Sequences

>TTHERM_00146040(coding)
ATGAGCAAAGGCAAGAAAGATAAATTAGATTTAACAGTGGCATTAAATAATGTACTAAAC
GATATAATAGTTCAGGATCCTTAGCAAATATTTTATCTTCCTGTTGATACTAAGCTGTTT
TTTGATTATACAAAGAAAATAGCAAAGCCTATGGACTTATAAACCATGCAAAAAAAAATT
AAAAAGTATGTAGGCTATAAAGAATTTGAAAACGATCTTAATCTGATTTGGAGTAATTGT
AGAATCTACAATTAAGAAAATAGTGACATATATAAAGCATCTTTAAGATTGGAAAGATTA
TCAAAAAAGTCATTAAAGGAGCATCTTCTACCTTTTAAAGCTCATTATAGATTTGATGAG
AATGGAGTTCCAATTAAAAAAAGAAAATACAATCGTGTGAAGGATTCGTTAAACTCAAGT
TTGATTTAAACAAATGGAAATTAAAACTATTAATATGCATCATCTTATGGTATTCCTTCC
AGAAAAACATCCTTAAGTGTAGATAAAAAAGAAAAAAGAGGCTCTAAAGGAGTAGCAAAA
TTGGCAAAGGCTATAAAGAAAGGGAAAAAGCAAGATTTGTTAGGATTAAAAAAAGCTCAA
TAAATACCAGCTCTCCCTTAGAATTTAATATTTGACAAAAAAACTATAATTCACCCTCCT
AAATCTTCAAATTACAACTGTATTGTGATAGGATTGCAATAATAAATCTAATCTAAAGAA
AATCTTATTACTGAAGATGATAAGTAATTTTTGAAGTAGAAGGTTGTGAATTTTTCGTAA
GAAGAACTCTTTAAATGCATTAAAACAATATAAGAATATGAGCCTTAGCACATTTCCTAG
CAATCAAAAGAACACTATATTGTTAATTTTAATACACTCACTAAAATGGTTTTTAATAAA
ATAAAAGAATAATTTTCATTATGA

>TTHERM_00146040(protein)
MSKGKKDKLDLTVALNNVLNDIIVQDPQQIFYLPVDTKLFFDYTKKIAKPMDLQTMQKKI
KKYVGYKEFENDLNLIWSNCRIYNQENSDIYKASLRLERLSKKSLKEHLLPFKAHYRFDE
NGVPIKKRKYNRVKDSLNSSLIQTNGNQNYQYASSYGIPSRKTSLSVDKKEKRGSKGVAK
LAKAIKKGKKQDLLGLKKAQQIPALPQNLIFDKKTIIHPPKSSNYNCIVIGLQQQIQSKE
NLITEDDKQFLKQKVVNFSQEELFKCIKTIQEYEPQHISQQSKEHYIVNFNTLTKMVFNK
IKEQFSL

>TTHERM_00146040(gene)
ATGAGCAAAGGCAAGAAAGATAAATTAGATTTAACAGTGGCATTAAATAATGTACTAAAC
GATATAATAGTTCAGGATCCTTAGCAAATATTTTATCTTCCTGTTGATACTAAGCTGTTT
TTTGATTATACAAAGAAAATAGCAAAGCCTATGGACTTATAAACCATGCAAAAAAAAATT
AAAAAGGTAAAATTAGTACAAAAATTATATTTAAGTTAATTTTAGAATATATTTTTTGCA
AAATAACTATCGTTTCTATTTAATTCTGACAAAAATTATTTTATTTCATATTATATTTAG
ATAATATTTAATCTTTTCTAAACCTGTTTTAAAATCATTAATTCCCATTTTTTATCTTTA
AAGTATGTAGGCTATAAAGAATTTGAAAACGATCTTAATCTGATTTGGAGTAATTGTAGA
ATCTACAATTAAGAAAATAGTGACATATATAAAGCATCTTTAAGATTGGAAAGATTATCA
AAAAAGTCATTAAAGGAGCATCTTCTACCTTTTAAAGCTCATTATAGATTTGATGAGAAT
GGAGTTCCAATTAAAAAAAGAAAATACAATCGTGTGAAGGATTCGTTAAACTCAAGTTTG
ATTTAAACAAATGGAAATTAAAACTATTAATATGCATCATCTTATGGTATTCCTTCCAGA
AAAACATCCTTAAGTGTAGATAAAAAAGGTAAAAAGATAAAAAATTTACAAAAATAAATA
TGTTGATTATTTTTAATATCTAGAAAAAAGAGGCTCTAAAGGAGTAGCAAAATTGGCAAA
GGCTATAAAGAAAGGGAAAAAGCAAGATTTGTTAGGATTAAAAAAAGCTCAATAAATACC
AGCTCTCCCTTAGAATTTAATATTTGACAAAAAAACTATAATTCACCCTCCTAAATCTTC
AAATTACAACTGTATTGTGATAGGATTGCAATAATAAATCTAATCTAAAGAAAATCTTAT
TACTGAAGATGATAAGTAATTTTTGAAGTAGAAGGTTGTGAATTTTTCGTAAGAAGAACT
CTTTAAATGCATTAAAACAATATAAGAATATGAGCCTTAGCACATTTCCTAGCAATCAAA
AGAACACTATATTGTTAATTTTAATACACTCACTAAAATGGTTTTTAATAAAATAAAAGA
ATAATTTTCATTATGA