Identifiers and Description

Gene Model Identifier

TTHERM_00449140

Standard Name

Brop-2 (Bromodomain containing protein 2)

Aliases

PreTt15432 | 52.m00210 | 3811.m00967

Description

Bromodomain containing protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: Yes
Presense Probability: 52.1%

TetraMine Data

TTHERM_00449140

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_14990.1	9.997093137033517e-262	bromodomain containing protein (364 aa)
Oxytricha	Contig18584.0.g108	6.996829646809514e-23	Bromodomain
WormBase	WBGene00017423	0.0000000000019997478866288316	status:Confirmed UniProt:O76 561 protein_id:CCD69431.1
Stentor Coeruleus	SteCoe_3545	0.000000000005109089028063325
SGD	YIL126W	0.00000000007999955850159168	STH1 ATPase component of the R SC chromatin remodeling comple x; required for expression of early meiotic genes; essential helicase-related protein homo logous to Snf2p
DictyBase	DDB_G0293800	0.00000000009998509410508463	DDB_G0293800 on chromosome: 6 position 3334534 to 3337072

General Information

No Data fetched for General Information

Associated Literature

1. Ref:29523178: Saettone A, Garg J, Lambert JP, Nabeel-Shah S, Ponce M, Burtch A, Thuppu Mudalige C, Gingras AC, Pearlman RE, Fillingham J (2018) The bromodomain-containing protein Ibd1 links multiple chromatin-related protein complexes to highly expressed genes in Tetrahymena thermophila. Epigenetics & chromatin 11(1):10

Sequences

>TTHERM_00449140(coding)
ATGAATGCTGCAATGATCAATATAAAAAATATAATATTGTTTTTAATACTGAATAGCAAG
CAAGCAAACAAAAATAGTAAAGAAAATTAAGCAGAAACTAAGAAAGAAATTTAGTGTAAT
TAAAGCAAAAATAATTAATTAAATACAGATAATACTATGAAAAGCAATACTACCAAGGAA
AAGGCGCCAAAAACAGAAGCAACAAAAACTAAGTTAGACAGAGAACTAATTAAGAAGCTT
CATAAAATTTTAAATAACTTAATAAATGATCCCGAATCTGGCGAATTCAGGAAGCCTGTT
TACTATAAAGCTCTTGGATTAGAAGATTATAAAAAGATTATAAAGAAGCCAATGGATTTA
AATAGTGTTCGCAGAAATTTGAACAAAAATTCATATGAGTTTCTTGAAGAGGTTCTTGAT
GATATATAATTAGTTTGGAATAATTGCAAGTTATACAACGAGCAAGGATCATGGATTTAT
TTAACTGCAGTCAAGCTTGAAACGTTTTTCCATGACCAATGTTTAGAGTAATTCCCAAAC
ACACCTCTGCCTAGCAACAAAATACCCGATAGAGCCCTCCTATTATAGTAATATAACGAG
AAGAGCAATAAACAAAAGTAATCTCAGTCTAATAAAGATTAAACTAATGAAGAAGAATAA
AAAGGAGCTTCAAACACTTTGCCTCTACCAAAATTGGCAAATCAAAGTTCAAATACATCA
ACTTCTAATCCTTAAACTATTGCTCAGTCTTTGATTACAACATAATCTGAGTTTAACCAA
AATAAGCAATCTCAAAATGGAAATAATTCAGCTTAAGCATCTCTTACTGCAGCTAATCAA
TCAAAGACTACAAATATTGATCTGCCTTTTAAATTTACTAAAAAAGGTATAAAAAGAATA
TCATAAAAATAAGTTGTTCATATACCTTTTATGAAATTTGCTAATGATAAATAAAAATTT
GATTAGCTTATACAGACTACCAAAGCAGTCTCTAAGCTTTTAACAAACCAACAAAAGCAA
ATAATAGATATAATTCAAGAGTTTTAGCCTTCAATTATACAAACAGATGAAAATGAAGTT
AAAAATGTTGATTTTAATTAAGTGTCAGAGTATACCTATGAATTGATAACTTCCTATCTG
AATTTACTTAAAAATCAAGAATCAAGTGAATAAGTAATGGAAATAGAATCTGATGATGAA
AATAATATTGAGATACTAAATAACTAGCAATCAAACAATGTATCTTTAAACGTATGA

>TTHERM_00449140(protein)
MNAAMINIKNIILFLILNSKQANKNSKENQAETKKEIQCNQSKNNQLNTDNTMKSNTTKE
KAPKTEATKTKLDRELIKKLHKILNNLINDPESGEFRKPVYYKALGLEDYKKIIKKPMDL
NSVRRNLNKNSYEFLEEVLDDIQLVWNNCKLYNEQGSWIYLTAVKLETFFHDQCLEQFPN
TPLPSNKIPDRALLLQQYNEKSNKQKQSQSNKDQTNEEEQKGASNTLPLPKLANQSSNTS
TSNPQTIAQSLITTQSEFNQNKQSQNGNNSAQASLTAANQSKTTNIDLPFKFTKKGIKRI
SQKQVVHIPFMKFANDKQKFDQLIQTTKAVSKLLTNQQKQIIDIIQEFQPSIIQTDENEV
KNVDFNQVSEYTYELITSYLNLLKNQESSEQVMEIESDDENNIEILNNQQSNNVSLNV

>TTHERM_00449140(gene)
ATGAATGCTGCAATGATCAATATAAAAAATATAATATTGTTTTTAATACTGAATAGCAAG
CAAGCAAACAAAAATAGTAAAGAAAATTAAGCAGAAACTAAGAAAGAAATTTAGTGTAAT
TAAAGCAAAAATAATTAATTAAATACAGATAATACTATGAAAAGCAATACTACCAAGGAA
AAGGCGCCAAAAACAGAAGCAACAAAAACTAAGTTAGACAGAGAACTAATTAAGAAGCTT
CATAAAATTTTAAATAACTTAATAAATGATCCCGAATCTGGCGAATTCAGGAAGCCTGTT
TACTATAAAGCTCTTGGATTAGAAGATTATAAAAAGATTATAAAGAAGCCAATGGATTTA
AATAGTGTTCGCAGAAATTTGAACAAAAATTCATATGAGTTTCTTGAAGAGGTTCTTGAT
GATATATAATTAGTTTGGAATAATTGCAAGTTATACAACGAGCAAGGATCAGTAAATGAT
AAATTAATTTTAACTGGATTCGTTATTTTAAAAATAATTTTTTTCTATGCATTTGTTAAA
AGTGTTGAAAATGCATTCGTGATCAGCTATAAACTTCAAATAAACTTAATTTTTTTGCTT
TAAGTATTATTTTTTAAATAAAAAAGTGGATTTATTTAACTGCAGTCAAGCTTGAAACGT
TTTTCCATGACCAATGTTTAGAGTAATTCCCAAACACACCTCTGCCTAGCAACAAAATAC
GTATAAAATTGAATTTATCAGTCTTTTAATTATTTATTTAGAAGCTAACTTTAAATTAAT
TGCTAAATTATAAATCTACAAAGAATAAATGAAGAGAATATCTTTTTTGTAATTCTAACA
TTAATGATAATTCTAATTTATATTTGTTGAAAAACGAATGAAAATTTTATTTAAATTTAT
TATAGCCGATAGAGCCCTCCTATTATAGTAATATAACGAGAAGAGCAATAAACAAAAGTA
ATCTCAGTCTAATAAAGATTAAACTAATGAAGAAGAATAAAAAGGAGCTTCAAACACTTT
GCCTCTACCAAAATTGGCAAATCAAAGTTCAAATACATCAACTTCTAATCCTTAAACTAT
TGCTCAGTCTTTGATTACAACATAATCTGAGTTTAACCAAAATAAGCAATCTCAAAATGG
AAATAATTCAGCTTAAGCATCTCTTACTGCAGCTAATCAATCAAAGACTACAAATATTGA
TCTGCCTTTTAAATTTACTAAAAAAGGTATAAAAAGAATATCATAAAAATAAGTTGTTCA
TATACCTTTTATGAAATTTGCTAATGATAAATAAAAATTTGATTAGCTTATACAGACTAC
CAAAGCAGTCTCTAAGCTTTTAACAAACCAACAAAAGCAAGTAAATAAATAAATAAAATT
AAAAAATTGGATTATAAATCATTTTTAATAAACAGATAATAGATATAATTCAAGAGTTTT
AGCCTTCAATTATACAAACAGTAAAATTTTTGAAAGTAATTTAACTCTTATATAGATCAT
TTTTTTAAAAATAAAAGGATGAAAATGAAGTTAAAAATGTTGATTTTAATTAAGTGTCAG
AGTATACCTATGAATTGATAACTTCCTATCTGAATTTACTTAAAAATCAAGAATCAAGTG
AATAAGTAATGGAAATAGAATCTGATGATGAAAATAATATTGAGATACTAAATAACTAGC
AATCAAACAATGTATCTTTAAACGTATGA