Identifiers and Description

Gene Model Identifier

TTHERM_00073170

Standard Name

BrAn-1 (Bromodomain and Ankyrin Repeat Domain 1)

Aliases

PreTt09960 | 5.m00311 | 3828.m01226

Description

Bromodomain containing protein

Genome Browser (Macronucleus)

Genome Browser (Micronucleus)

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

• ( PF00439 ) Bromodomain
• ( PF00023 ) Ankyrin repeat
• ( PF00904 ) Involucrin repeat

Gene Expression Profile

• Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.9%

TetraMine Data

TTHERM_00073170

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

Source	Identifier	Score	Description
Tetrahymena borealis	EI9_07174.1	9.997093137033517e-262	bromodomain containing protein (961 aa)
Oxytricha	Contig15136.0.g101	4.999934616708877e-52	Ankyrin repeats (3 copies)
Stentor Coeruleus	SteCoe_12200	9.602680054508676e-24
SGD	YLR399C	0.000000000000006000101554955223	BDF1 Protein involved in trans cription initiation at TATA-co ntaining promoters; associates with the basal transcription factor TFIID; contains two bro modomains; corresponds to the C-terminal region of mammalian TAF1; redundant with Bdf2p
WormBase	WBGene00017423	0.0000000000008001317446409227	status:Confirmed UniProt:O76 561 protein_id:CCD69431.1
DictyBase	DDB_G0280777	0.00020003864201578029	DDB_G0280777 on chromosome: 3 position 3729649 to 3735545

General Information

No Data fetched for General Information

Associated Literature

1. Ref:29523178: Saettone A, Garg J, Lambert JP, Nabeel-Shah S, Ponce M, Burtch A, Thuppu Mudalige C, Gingras AC, Pearlman RE, Fillingham J (2018) The bromodomain-containing protein Ibd1 links multiple chromatin-related protein complexes to highly expressed genes in Tetrahymena thermophila. Epigenetics & chromatin 11(1):10

Sequences

>TTHERM_00073170(coding)
ATGAGTGATTAATAAGTGTAGGAATAGGACTATTAATATAACGAAGAAAATCAAGAGGTG
AATCATGATTAAGAATAAGAGCATAGGGGTGATGGATCTAATTTAAATTTTGATGAGGAA
AACAATTAGTAGGATTAAGTAGCAGAAGAAGGTGGTGAGATGGAGTTGGAATAGCATCAA
GATTTGAACGAAGAGCATTAGCAAAATGAATAAATTGAACACAATCAAGATCATTAATAA
TATGATGAAGGCAATTATGAACATTAAGAACAAGGAGAAGGATAAGAAATGCATCATCAA
GAAAACTAAGAAGACTAAATGCAAGAAGGCGGAGAATAGCTAATGGAATAATAAAATGAA
AATTACCATTAATAGGAAGGTTAAGAAGAGGAATAAGAATAGTAGTACTAATAAGAGTAG
GAGGATTAGATTCAAGATGAAAATGAAGAGTAGAATTATGATGGTAATGAAGAGCTTTAG
TAAGAACAAGTAGAATAGCAAGAAGAGTAAAATCAAGGTGATGAAAATTAAGAGCAATAA
TAACATGAGGAGGATGAGCAAAAATTGGAATATCAAAACGAAGATCAACAACATTAAGAG
TAATAAGAAGGAGAACAAGAAAATTAGGATGATGTCTAATTCTAAAATGATCAAAACGAA
GGATACGAATAAATAGAAGTTAAGGAAGATGAAAACAAAATTGAAGAAGAATAAGAATAA
GAATACAACCAAGAAATGAAGAATGAAGAAGAAGATGAATAATAATAGGATCAAAACTAA
GAATAAGTTAGCTAATCTTAGTAAAATCATATGGAGCATTTAGAATAATAGCAAGAGCAT
TAATAACAAAAGGAAGAGGAGGAATAATATTAGCAGTAGCAAGAAGCCAACGAAAACTAG
TAGTTATAACACCAATAATAATTTGAATAATAAAAGCAAGAAGCTAAGTATGAAGAGCCA
TCTGAACCTGTCAAAATGCTCTCTCCAGAGGAATTAAACAACATTTTTAATGAATTTAAA
GCTTCTATTCGCAATTACTTAGTTGATAAAGTTGTTGACATATTGAAAAAGTACTAGAAA
ATTTATAACATTGCTAATAAGGTAGACACTTAAACTAGATAAATCAGTACCTACATAGCT
GCTAACTTAGCAACCGACGAATAGACTTATAACATGCTCAAAACCTTAATTGATTATGGC
GCTAATCCTTTGTTTAGAGATTAATTAAAGGAATCAGTTTTGTTCTATATAGCTAAAGAT
GGTAAAATGAAATCCTTCTAGCTCCTTATGGAACATGGCGCTCAACCCAACGAAGAGGAT
TCCAACGGATAAACCCCTCTTTTCTTTGCTTCTAGAGATAATAGAATTGAAATGGTTAAA
GAATTAATTAGATGTGGAGCTGATGCTTTCCATACTGATAAAATTTGCAGCTAAACTGCT
CTTTTCTACGCTGCCAGAGAAGGAAATAACGAAATTTGTAACATTTTGATAACTAATGGA
TGCAAAGTTAACCACTAAGATTCCACTAAGAAGAATGCTGTTTTCTTCGCTAGGAGAAAC
AACAAAAAAGATACTGTAGAACTTTTGTAAGAATACATGAATAAAATAAAAAATGAAGAA
TAAAAAGCTAAAGAAATTCCCCCTAAGAAAGTTACAAAAGGCGCAGTCAAAGAAATAGCA
CCTCCTAACCCAGTTGCTGAGCCTACTTCTCAATCGGCTGAGTAATTGATGTCTTTTGAT
TAAAAATCTATAGATAAAAAGAATGATTCAAAGCAAAGAAACAGAAAGTCAAACAAGGAT
TAAGCCAAAATGTCTTATAAGTTAGTTTATACAGATGAAAATGGGTAATAAAGAGAATTA
TCAAGAGCAGAATATTTAGAGTTCAAAGCAAAATATCCTCAAATTACAAAGATTATTGAG
CACGCAGACGAAATGATTAATGAAGACGTTTATGGAAAGGAAAAAGATAGTTGGGAAAAA
GTTGCTAAGAAAGTTTTATAAGCAATTTCTAAAGTTAAAGGTTGCTATTTATTCCAACAA
CCTGTAGATGTTGTTCGTTATAAAATTGATGATTATTATGACATAGTTAAAAAGCCAATG
GATTTCGGTACAATTAAGAATAAATTAAACACAAATGTGTATGAAAATTGCAAGTAGTAC
TTAGAAGATATGGAATTGGTCTTCTATAACTGTATTTTATATAATGGATCTGACTCAGAA
GTTGGCAGAGTTTGTCTCAACGTTAAATAAGAATTTAAGAAATAGTGCCTATTATTTGAC
ATTTACCAATATCTCTCTCCAGACCAATAAGAAGGATATGGAAATGAGATGAATGACAGA
GATTAATTACAATTAGCTCAATAAGGATAAGGATAACAAATTTCTCATTATAATGATCAA
CAATAAATGTAAAGCTAATAAAATGTTGAAGAATAAGAAGGAAATAATAACCAATAGCAC
ATTAGTTAATCCTATAATTAAGAATCTTAAAATGATATGGGATATAATTAAGGTGAACAA
TCTAACAGTAATTAGTAAATGAGCTCACAATATTGA

>TTHERM_00073170(protein)
MSDQQVQEQDYQYNEENQEVNHDQEQEHRGDGSNLNFDEENNQQDQVAEEGGEMELEQHQ
DLNEEHQQNEQIEHNQDHQQYDEGNYEHQEQGEGQEMHHQENQEDQMQEGGEQLMEQQNE
NYHQQEGQEEEQEQQYQQEQEDQIQDENEEQNYDGNEELQQEQVEQQEEQNQGDENQEQQ
QHEEDEQKLEYQNEDQQHQEQQEGEQENQDDVQFQNDQNEGYEQIEVKEDENKIEEEQEQ
EYNQEMKNEEEDEQQQDQNQEQVSQSQQNHMEHLEQQQEHQQQKEEEEQYQQQQEANENQ
QLQHQQQFEQQKQEAKYEEPSEPVKMLSPEELNNIFNEFKASIRNYLVDKVVDILKKYQK
IYNIANKVDTQTRQISTYIAANLATDEQTYNMLKTLIDYGANPLFRDQLKESVLFYIAKD
GKMKSFQLLMEHGAQPNEEDSNGQTPLFFASRDNRIEMVKELIRCGADAFHTDKICSQTA
LFYAAREGNNEICNILITNGCKVNHQDSTKKNAVFFARRNNKKDTVELLQEYMNKIKNEE
QKAKEIPPKKVTKGAVKEIAPPNPVAEPTSQSAEQLMSFDQKSIDKKNDSKQRNRKSNKD
QAKMSYKLVYTDENGQQRELSRAEYLEFKAKYPQITKIIEHADEMINEDVYGKEKDSWEK
VAKKVLQAISKVKGCYLFQQPVDVVRYKIDDYYDIVKKPMDFGTIKNKLNTNVYENCKQY
LEDMELVFYNCILYNGSDSEVGRVCLNVKQEFKKQCLLFDIYQYLSPDQQEGYGNEMNDR
DQLQLAQQGQGQQISHYNDQQQMQSQQNVEEQEGNNNQQHISQSYNQESQNDMGYNQGEQ
SNSNQQMSSQY

>TTHERM_00073170(gene)
ATAAAAAAGAAAAAATATAGTTTAGAAAAAAAGATAAGATTTTAGTTGTTTCTCTTCTCT
AAAAGATATTTAATAAATTAATTAAAGAGATCGATCAATAGTTTAATTAAGATCAAACAA
AAGCATAAAATAAATAGTAAATAAAGCGTTTAGAAAAATATTTTTGGAATGAGTGATTAA
TAAGTGTAGGAATAGGACTATTAATATAACGAAGAAAATCAAGAGGTGAATCATGATTAA
GGTACTTATTTTTATAAGATTTAATCTATTTATCACATTTGTCTTTTTTTGTTTTTGAAT
CTATCTTGCTTTATCTAAATAATATTTTTAAAATTTAGAATAAGAGCATAGGGGTGATGG
ATCTAATTTAAATTTTGATGAGGAAAACAATTAGTAGGATTAAGTAGCAGAAGAAGGTGG
TGAGATGGAGTTGGAATAGCATCAAGATTTGAACGAAGAGCATTAGCAAAATGAATAAAT
TGAACACAATCAAGATCATTAATAATATGATGAAGGCAATTATGAACATTAAGAACAAGG
AGAAGGATAAGAAATGCATCATCAAGAAAACTAAGAAGACTAAATGCAAGAAGGCGGAGA
ATAGCTAATGGAATAATAAAATGAAAATTACCATTAATAGGAAGGTTAAGAAGAGGAATA
AGAATAGTAGTACTAATAAGAGTAGGAGGATTAGATTCAAGATGAAAATGAAGAGTAGAA
TTATGATGGTAATGAAGAGCTTTAGTAAGAACAAGTAGAATAGCAAGAAGAGTAAAATCA
AGGTATATATATTACGTTAACTTGCTGAATTAGTTTATTTATTAAAGCAATTTTTGTAAA
TTTAAGGTGATGAAAATTAAGAGCAATAATAACATGAGGAGGATGAGCAAAAATTGGAAT
ATCAAAACGAAGATCAACAACATTAAGAGTAATAAGAAGGAGAACAAGAAAATTAGGATG
ATGTCTAATTCTAAAATGATCAAAACGAAGGATACGAATAAATAGAAGTTAAGGAAGATG
AAAACAAAATTGAAGAAGAATAAGAATAAGAATACAACCAAGAAATGAAGAATGAAGAAG
AAGATGAATAATAATAGGATCAAAACTAAGAATAAGTTAGCTAATCTTAGTAAAATCATA
TGGAGCATTTAGAATAATAGCAAGAGCATTAATAACAAAAGGAAGAGGAGGAATAATATT
AGCAGTAGCAAGAAGCCAACGAAAACTAGTAGTTATAACACCAATAATAATTTGAATAAT
AAAAGCAAGAAGCTAAGTATGAAGAGCCATCTGAACCTGTCAAAATGCTCTCTCCAGAGG
AATTAAACAACATTTTTAATGAATTTAAAGCTTCTATTCGCAATTACTTAGTTGATAAAG
TTGTTGACATATTGAGTATAGATTGATTTTTACTATTTACTAGAATTCTTAAAAGATTAA
ATTTTATTTTAAAACAGAAAAGTACTAGAAAATTTATAACATTGCTAATAAGGTAGACAC
TTAAACTAGATAAATCAGTACCTACATAGCTGCTAACTTAGCAACCGACGAATAGACTTA
TAACATGCTCAAAACCTTAATTGATTATGGTACTTTATTCACTTTTAGCCTTATTTTTCT
ATTTAAATCTTCTTCAATATTTTTAAAGTGTTTAAAAGAAAAAATAAAAAAATAGACAAT
GAAATTAAAATAGATTTTTCTTTTTTTTAAAAAAATTAAACAAAATAAAGTTTCTTAAAC
AATGAATTTAAAATGCTTTTTTTTCATAAAAAATTTCTAGATTTTAAATAATAGCAATTT
ATTATGACCAATAAACTGAAAAATTAATATTTTTTAACTTAGCTTTTTTTTTGAATGCAA
CTCAAGCAAATTTAATTTATTCATTTTATTGAATCTCTTGTTAATAAATTTTAAATTAAA
AACATAGGCGCTAATCCTTTGTTTAGAGATTAATTAAAGGAATCAGTTTTGTTCTATATA
GCTAAAGATGGTAAAATGAAATCCTTCTAGCTCCTTATGGAACATGGCGCTCAACCCAAC
GAAGAGGATTCCAACGGATAAACCCCTCTTTTCTTTGCTTCTAGAGATAATAGAATTGAA
ATGGTTAAAGAATTAATTAGATGTGGAGCTGATGCTTTCCATACTGATAAAATTTGCAGC
TAAACTGCTCTTTTCTACGCTGCCAGAGAAGGAAATAACGAAATTTGTAACATTTTGATA
ACTAATGGATGCAAAGTTAACCACTAAGATTCCACTAAGAAGAATGCTGTTTTCTTCGCT
AGGAGAAACAACAAAAAAGATACTGTAGAACTTTTGTAAGAATACATGAATAAAATAAAA
AATGAAGAATAAAAAGCTAAAGAAATTCCCCCTAAGAAAGTTACAAAAGGCGCAGTCAAA
GAAATAGCACCTCCTAACCCAGTTGCTGAGCCTACTTCTCAATCGGCTGAGTAATTGATG
TCTTTTGATTAAAAATCTATAGGTAATTTAATTATAATTTGAATAAGTAGCTTTTTGAAC
TTACAAAATATTTAAATTTATAAGATAAAAAGAATGATTCAAAGCAAAGAAACAGAAAGT
CAAACAAGGATTAAGCCAAAATGTCTTATAAGTTAGTTTATACAGATGAAAATGGGTAAT
AAAGAGAATTATCAAGAGCAGAATATTTAGAGTTCAAAGCAAAATATCCTCAAATTACAA
AGATTATTGAGCACGCAGACGAAATGATTAATGAAGACGTTTATGGAAAGGAAAAAGATA
GTTGGGAAAAAGTTGCTAAGAAAGTTTTATAAGCAATTTCTAAAGTTAAAGGTTGCTATT
TATTCCAACAACCTGTAGATGTTGTTCGTTATAAAATTGATGATTATTATGACATAGTTA
AAAAGCCAATGGATTTCGGTACAATTAAGGTATGAATTTTAATAATTTAATATTATTTTT
TAAATCACATATTTAAATAATTTAATAGAATAAATTAAACACAAATGTGTATGAAAATTG
CAAGTAGTACTTAGAAGATATGGAATTGTAATTTAGTTTTTATTGATGTGAATAAATATA
TATTATTAAAACGCATATAATAGGGTCTTCTATAACTGTATTTTATATAATGGATCTGAC
TCAGAAGTTGGCAGAGTTTGTCTCAACGTTAAATAAGAATTTAAGAAATAGTGCCTATTA
TTTGACATTTACCAATATCTCTCTCCAGACCAATGTAAGCACTTAAATTATTTTTGTTTT
TTGAAAAATGTAATACAAAATACTTATCTCAGTAGAATTGCTTTATTTTATTAAAACATT
TTTTCATTTTTAATTTCTAAAAATGATTTTAATGCTTTTTATTATTTATTTTATAAACAA
AATAACTAAATTACATTTTCAATTTAGTTAAAAACAAACTACTTTTTTATTTATTTTTCA
ATGATAAAAATTCAATAACATAAATTTAACATAAAAAAATGTATTTAATTTGATGGTAAA
ATTTATTTTGAATAACAGAAGAAGGATATGGAAATGAGATGAATGACAGAGATTAATTAC
AATTAGCTCAATAAGGATAAGGATAACAAATTTCTCATTATAATGATCAACAATAAATGT
AAAGCTAATAAAATGTTGAAGAATAAGAAGGAAATAATAACCAATAGCACATTAGTTAAT
CCTATAATTAAGAATCTTAAAATGATATGGGATATAATTAAGGTGAACAATCTAACAGTA
ATTAGTAAATGAGCTCACAATATTGA