Identifiers and Description

Gene Model Identifier

TTHERM_00073170

Standard Name

BrAn-1 (Bromodomain and Ankyrin Repeat Domain 1)

Aliases

PreTt09960 | 5.m00311 | 3828.m01226

Description

bromodomain domain protein

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

GBrowse

Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 10.9%

TetraMine Data

TTHERM_00073170

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_07174.19.997093137033517e-262bromodomain containing protein
(961 aa)
OxytrichaContig15136.0.g1014.999934616708877e-52Ankyrin repeats (3 copies)
Stentor CoeruleusSteCoe_122009.602680054508676e-24
SGDYLR399C0.000000000000006000101554955223BDF1 Protein involved in trans
cription initiation at TATA-co
ntaining promoters; associates
with the basal transcription
factor TFIID; contains two bro
modomains; corresponds to the
C-terminal region of mammalian
TAF1; redundant with Bdf2p
WormBaseWBGene000174230.0000000000008001317446409227status:Confirmed UniProt:O76
561 protein_id:CCD69431.1
DictyBaseDDB_G02807770.00020003864201578029DDB_G0280777 on chromosome: 3
position 3729649 to 3735545

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:29523178: Saettone A, Garg J, Lambert JP, Nabeel-Shah S, Ponce M, Burtch A, Thuppu Mudalige C, Gingras AC, Pearlman RE, Fillingham J (2018) The bromodomain-containing protein Ibd1 links multiple chromatin-related protein complexes to highly expressed genes in Tetrahymena thermophila. Epigenetics & chromatin 11(1):10

Sequences

>TTHERM_00073170(coding)
ATGAGTGATTAATAAGTGTAGGAATAGGACTATTAATATAACGAAGAAAATCAAGAGGTG
AATCATGATTAAGAATAAGAGCATAGGGGTGATGGATCTAATTTAAATTTTGATGAGGAA
AACAATTAGTAGGATTAAGTAGCAGAAGAAGGTGGTGAGATGGAGTTGGAATAGCATCAA
GATTTGAACGAAGAGCATTAGCAAAATGAATAAATTGAACACAATCAAGATCATTAATAA
TATGATGAAGGCAATTATGAACATTAAGAACAAGGAGAAGGATAAGAAATGCATCATCAA
GAAAACTAAGAAGACTAAATGCAAGAAGGCGGAGAATAGCTAATGGAATAATAAAATGAA
AATTACCATTAATAGGAAGGTTAAGAAGAGGAATAAGAATAGTAGTACTAATAAGAGTAG
GAGGATTAGATTCAAGATGAAAATGAAGAGTAGAATTATGATGGTAATGAAGAGCTTTAG
TAAGAACAAGTAGAATAGCAAGAAGAGTAAAATCAAGGTGATGAAAATTAAGAGCAATAA
TAACATGAGGAGGATGAGCAAAAATTGGAATATCAAAACGAAGATCAACAACATTAAGAG
TAATAAGAAGGAGAACAAGAAAATTAGGATGATGTCTAATTCTAAAATGATCAAAACGAA
GGATACGAATAAATAGAAGTTAAGGAAGATGAAAACAAAATTGAAGAAGAATAAGAATAA
GAATACAACCAAGAAATGAAGAATGAAGAAGAAGATGAATAATAATAGGATCAAAACTAA
GAATAAGTTAGCTAATCTTAGTAAAATCATATGGAGCATTTAGAATAATAGCAAGAGCAT
TAATAACAAAAGGAAGAGGAGGAATAATATTAGCAGTAGCAAGAAGCCAACGAAAACTAG
TAGTTATAACACCAATAATAATTTGAATAATAAAAGCAAGAAGCTAAGTATGAAGAGCCA
TCTGAACCTGTCAAAATGCTCTCTCCAGAGGAATTAAACAACATTTTTAATGAATTTAAA
GCTTCTATTCGCAATTACTTAGTTGATAAAGTTGTTGACATATTGAAAAAGTACTAGAAA
ATTTATAACATTGCTAATAAGGTAGACACTTAAACTAGATAAATCAGTACCTACATAGCT
GCTAACTTAGCAACCGACGAATAGACTTATAACATGCTCAAAACCTTAATTGATTATGGC
GCTAATCCTTTGTTTAGAGATTAATTAAAGGAATCAGTTTTGTTCTATATAGCTAAAGAT
GGTAAAATGAAATCCTTCTAGCTCCTTATGGAACATGGCGCTCAACCCAACGAAGAGGAT
TCCAACGGATAAACCCCTCTTTTCTTTGCTTCTAGAGATAATAGAATTGAAATGGTTAAA
GAATTAATTAGATGTGGAGCTGATGCTTTCCATACTGATAAAATTTGCAGCTAAACTGCT
CTTTTCTACGCTGCCAGAGAAGGAAATAACGAAATTTGTAACATTTTGATAACTAATGGA
TGCAAAGTTAACCACTAAGATTCCACTAAGAAGAATGCTGTTTTCTTCGCTAGGAGAAAC
AACAAAAAAGATACTGTAGAACTTTTGTAAGAATACATGAATAAAATAAAAAATGAAGAA
TAAAAAGCTAAAGAAATTCCCCCTAAGAAAGTTACAAAAGGCGCAGTCAAAGAAATAGCA
CCTCCTAACCCAGTTGCTGAGCCTACTTCTCAATCGGCTGAGTAATTGATGTCTTTTGAT
TAAAAATCTATAGATAAAAAGAATGATTCAAAGCAAAGAAACAGAAAGTCAAACAAGGAT
TAAGCCAAAATGTCTTATAAGTTAGTTTATACAGATGAAAATGGGTAATAAAGAGAATTA
TCAAGAGCAGAATATTTAGAGTTCAAAGCAAAATATCCTCAAATTACAAAGATTATTGAG
CACGCAGACGAAATGATTAATGAAGACGTTTATGGAAAGGAAAAAGATAGTTGGGAAAAA
GTTGCTAAGAAAGTTTTATAAGCAATTTCTAAAGTTAAAGGTTGCTATTTATTCCAACAA
CCTGTAGATGTTGTTCGTTATAAAATTGATGATTATTATGACATAGTTAAAAAGCCAATG
GATTTCGGTACAATTAAGAATAAATTAAACACAAATGTGTATGAAAATTGCAAGTAGTAC
TTAGAAGATATGGAATTGGTCTTCTATAACTGTATTTTATATAATGGATCTGACTCAGAA
GTTGGCAGAGTTTGTCTCAACGTTAAATAAGAATTTAAGAAATAGTGCCTATTATTTGAC
ATTTACCAATATCTCTCTCCAGACCAATAAGAAGGATATGGAAATGAGATGAATGACAGA
GATTAATTACAATTAGCTCAATAAGGATAAGGATAACAAATTTCTCATTATAATGATCAA
CAATAAATGTAAAGCTAATAAAATGTTGAAGAATAAGAAGGAAATAATAACCAATAGCAC
ATTAGTTAATCCTATAATTAAGAATCTTAAAATGATATGGGATATAATTAAGGTGAACAA
TCTAACAGTAATTAGTAAATGAGCTCACAATATTGA


>TTHERM_00073170(protein)
MSDQQVQEQDYQYNEENQEVNHDQEQEHRGDGSNLNFDEENNQQDQVAEEGGEMELEQHQ
DLNEEHQQNEQIEHNQDHQQYDEGNYEHQEQGEGQEMHHQENQEDQMQEGGEQLMEQQNE
NYHQQEGQEEEQEQQYQQEQEDQIQDENEEQNYDGNEELQQEQVEQQEEQNQGDENQEQQ
QHEEDEQKLEYQNEDQQHQEQQEGEQENQDDVQFQNDQNEGYEQIEVKEDENKIEEEQEQ
EYNQEMKNEEEDEQQQDQNQEQVSQSQQNHMEHLEQQQEHQQQKEEEEQYQQQQEANENQ
QLQHQQQFEQQKQEAKYEEPSEPVKMLSPEELNNIFNEFKASIRNYLVDKVVDILKKYQK
IYNIANKVDTQTRQISTYIAANLATDEQTYNMLKTLIDYGANPLFRDQLKESVLFYIAKD
GKMKSFQLLMEHGAQPNEEDSNGQTPLFFASRDNRIEMVKELIRCGADAFHTDKICSQTA
LFYAAREGNNEICNILITNGCKVNHQDSTKKNAVFFARRNNKKDTVELLQEYMNKIKNEE
QKAKEIPPKKVTKGAVKEIAPPNPVAEPTSQSAEQLMSFDQKSIDKKNDSKQRNRKSNKD
QAKMSYKLVYTDENGQQRELSRAEYLEFKAKYPQITKIIEHADEMINEDVYGKEKDSWEK
VAKKVLQAISKVKGCYLFQQPVDVVRYKIDDYYDIVKKPMDFGTIKNKLNTNVYENCKQY
LEDMELVFYNCILYNGSDSEVGRVCLNVKQEFKKQCLLFDIYQYLSPDQQEGYGNEMNDR
DQLQLAQQGQGQQISHYNDQQQMQSQQNVEEQEGNNNQQHISQSYNQESQNDMGYNQGEQ
SNSNQQMSSQY


>TTHERM_00073170(gene)
ATGAGTGATTAATAAGTGTAGGAATAGGACTATTAATATAACGAAGAAAATCAAGAGGTG
AATCATGATTAAGGTACTTATTTTTATAAGATTTAATCTATTTATCACATTTGTCTTTTT
TTGTTTTTGAATCTATCTTGCTTTATCTAAATAATATTTTTAAAATTTAGAATAAGAGCA
TAGGGGTGATGGATCTAATTTAAATTTTGATGAGGAAAACAATTAGTAGGATTAAGTAGC
AGAAGAAGGTGGTGAGATGGAGTTGGAATAGCATCAAGATTTGAACGAAGAGCATTAGCA
AAATGAATAAATTGAACACAATCAAGATCATTAATAATATGATGAAGGCAATTATGAACA
TTAAGAACAAGGAGAAGGATAAGAAATGCATCATCAAGAAAACTAAGAAGACTAAATGCA
AGAAGGCGGAGAATAGCTAATGGAATAATAAAATGAAAATTACCATTAATAGGAAGGTTA
AGAAGAGGAATAAGAATAGTAGTACTAATAAGAGTAGGAGGATTAGATTCAAGATGAAAA
TGAAGAGTAGAATTATGATGGTAATGAAGAGCTTTAGTAAGAACAAGTAGAATAGCAAGA
AGAGTAAAATCAAGGTATATATATTACGTTAACTTGCTGAATTAGTTTATTTATTAAAGC
AATTTTTGTAAATTTAAGGTGATGAAAATTAAGAGCAATAATAACATGAGGAGGATGAGC
AAAAATTGGAATATCAAAACGAAGATCAACAACATTAAGAGTAATAAGAAGGAGAACAAG
AAAATTAGGATGATGTCTAATTCTAAAATGATCAAAACGAAGGATACGAATAAATAGAAG
TTAAGGAAGATGAAAACAAAATTGAAGAAGAATAAGAATAAGAATACAACCAAGAAATGA
AGAATGAAGAAGAAGATGAATAATAATAGGATCAAAACTAAGAATAAGTTAGCTAATCTT
AGTAAAATCATATGGAGCATTTAGAATAATAGCAAGAGCATTAATAACAAAAGGAAGAGG
AGGAATAATATTAGCAGTAGCAAGAAGCCAACGAAAACTAGTAGTTATAACACCAATAAT
AATTTGAATAATAAAAGCAAGAAGCTAAGTATGAAGAGCCATCTGAACCTGTCAAAATGC
TCTCTCCAGAGGAATTAAACAACATTTTTAATGAATTTAAAGCTTCTATTCGCAATTACT
TAGTTGATAAAGTTGTTGACATATTGAGTATAGATTGATTTTTACTATTTACTAGAATTC
TTAAAAGATTAAATTTTATTTTAAAACAGAAAAGTACTAGAAAATTTATAACATTGCTAA
TAAGGTAGACACTTAAACTAGATAAATCAGTACCTACATAGCTGCTAACTTAGCAACCGA
CGAATAGACTTATAACATGCTCAAAACCTTAATTGATTATGGTACTTTATTCACTTTTAG
CCTTATTTTTCTATTTAAATCTTCTTCAATATTTTTAAAGTGTTTAAAAGAAAAAATAAA
AAAATAGACAATGAAATTAAAATAGATTTTTCTTTTTTTTAAAAAAATTAAACAAAATAA
AGTTTCTTAAACAATGAATTTAAAATGCTTTTTTTTCATAAAAAATTTCTAGATTTTAAA
TAATAGCAATTTATTATGACCAATAAACTGAAAAATTAATATTTTTTAACTTAGCTTTTT
TTTTGAATGCAACTCAAGCAAATTTAATTTATTCATTTTATTGAATCTCTTGTTAATAAA
TTTTAAATTAAAAACATAGGCGCTAATCCTTTGTTTAGAGATTAATTAAAGGAATCAGTT
TTGTTCTATATAGCTAAAGATGGTAAAATGAAATCCTTCTAGCTCCTTATGGAACATGGC
GCTCAACCCAACGAAGAGGATTCCAACGGATAAACCCCTCTTTTCTTTGCTTCTAGAGAT
AATAGAATTGAAATGGTTAAAGAATTAATTAGATGTGGAGCTGATGCTTTCCATACTGAT
AAAATTTGCAGCTAAACTGCTCTTTTCTACGCTGCCAGAGAAGGAAATAACGAAATTTGT
AACATTTTGATAACTAATGGATGCAAAGTTAACCACTAAGATTCCACTAAGAAGAATGCT
GTTTTCTTCGCTAGGAGAAACAACAAAAAAGATACTGTAGAACTTTTGTAAGAATACATG
AATAAAATAAAAAATGAAGAATAAAAAGCTAAAGAAATTCCCCCTAAGAAAGTTACAAAA
GGCGCAGTCAAAGAAATAGCACCTCCTAACCCAGTTGCTGAGCCTACTTCTCAATCGGCT
GAGTAATTGATGTCTTTTGATTAAAAATCTATAGGTAATTTAATTATAATTTGAATAAGT
AGCTTTTTGAACTTACAAAATATTTAAATTTATAAGATAAAAAGAATGATTCAAAGCAAA
GAAACAGAAAGTCAAACAAGGATTAAGCCAAAATGTCTTATAAGTTAGTTTATACAGATG
AAAATGGGTAATAAAGAGAATTATCAAGAGCAGAATATTTAGAGTTCAAAGCAAAATATC
CTCAAATTACAAAGATTATTGAGCACGCAGACGAAATGATTAATGAAGACGTTTATGGAA
AGGAAAAAGATAGTTGGGAAAAAGTTGCTAAGAAAGTTTTATAAGCAATTTCTAAAGTTA
AAGGTTGCTATTTATTCCAACAACCTGTAGATGTTGTTCGTTATAAAATTGATGATTATT
ATGACATAGTTAAAAAGCCAATGGATTTCGGTACAATTAAGGTATGAATTTTAATAATTT
AATATTATTTTTTAAATCACATATTTAAATAATTTAATAGAATAAATTAAACACAAATGT
GTATGAAAATTGCAAGTAGTACTTAGAAGATATGGAATTGTAATTTAGTTTTTATTGATG
TGAATAAATATATATTATTAAAACGCATATAATAGGGTCTTCTATAACTGTATTTTATAT
AATGGATCTGACTCAGAAGTTGGCAGAGTTTGTCTCAACGTTAAATAAGAATTTAAGAAA
TAGTGCCTATTATTTGACATTTACCAATATCTCTCTCCAGACCAATGTAAGCACTTAAAT
TATTTTTGTTTTTTGAAAAATGTAATACAAAATACTTATCTCAGTAGAATTGCTTTATTT
TATTAAAACATTTTTTCATTTTTAATTTCTAAAAATGATTTTAATGCTTTTTATTATTTA
TTTTATAAACAAAATAACTAAATTACATTTTCAATTTAGTTAAAAACAAACTACTTTTTT
ATTTATTTTTCAATGATAAAAATTCAATAACATAAATTTAACATAAAAAAATGTATTTAA
TTTGATGGTAAAATTTATTTTGAATAACAGAAGAAGGATATGGAAATGAGATGAATGACA
GAGATTAATTACAATTAGCTCAATAAGGATAAGGATAACAAATTTCTCATTATAATGATC
AACAATAAATGTAAAGCTAATAAAATGTTGAAGAATAAGAAGGAAATAATAACCAATAGC
ACATTAGTTAATCCTATAATTAAGAATCTTAAAATGATATGGGATATAATTAAGGTGAAC
AATCTAACAGTAATTAGTAAATGAGCTCACAATATTGA