Identifiers and Description
Gene Model Identifier
TTHERM_00790530Standard Name
BRE1 (E3 ubiquitin ligase BRE1)Aliases
PreTt01343 | 133.m00068Description
BRE1 zinc finger C3HC4 type (RING finger) protein; E3 ubiquitin ligase; required for H2B ubiquitylationGenome Browser (Macronucleus)
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Genome Browser (Micronucleus)
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Gene Ontology Annotations
Molecular Function
- zinc ion binding (IEA) | GO:0008270
- protein binding (IEA) | GO:0005515
Biological Process
- histone ubiquitination (IDA) | GO:0016574 | Ref:19822522
Domains
- ( PF05227 ) CHASE3 domain
- ( PF00435 ) Spectrin repeat
- ( PF02370 ) M protein repeat
- ( PF00904 ) Involucrin repeat
- ( PF06009 ) Laminin Domain II
- ( PF08252 ) arg-2/CPA1 leader peptide
- ( TIGR02641 ) gas vesicle protein GvpC repeat
- ( PF08946 ) Osmosensory transporter coiled coil
- ( PF00097 ) zinc finger, C3HC4 type (RING
- ( PF05911 ) Plant protein of unknown function
- ( PF09006 ) Lung surfactant protein D coiled-coil
Gene Expression Profile
Change in Gene Expression
TMHMM
TMHMM
Signal Peptide
Signal Peptide Present?: No
Presense Probability: 10.3%
TetraMine Data
TTHERM_00790530
WebApollo
Fullscreen View
Tetrahymena Stock Center
Homologs (v.2006 protein sequences)
Source Identifier Score Description Tetrahymena borealis EI9_05583.1 9.997093137033517e-262 zinc finger protein (1066 aa)
SGD YDL074C 0.0000000000008001317446409227 BRE1 E3 ubiquitin ligase, form
s heterodimer with Rad6p to mo
noubiquinate histone H2B-K123,
which is required for the sub
sequent methylation of histone
H3-K4 and H3-K79; required fo
r DSBR, transcription, silenci
ng, and checkpoint control
WormBase WBGene00007008 0.00000000019994075865167896 locus:rfp-1 E3 ubiquitin-pro
tein ligase bre-1 status:Con
firmed UniProt:P34537 prot
ein_id:CCD73191.1
DictyBase DDB_G0274241 0.0000000010002658722841845 bre1 on chromosome: 2 position
4227111 to 4230916
Oxytricha Contig22668.0.g8 0.0000009995106777214876 Zinc finger, C3HC4 type (RING
finger)
Stentor Coeruleus SteCoe_32891 0.00001670170079024566
General Information
No Data fetched for General Information
Associated Literature
- Ref:19822522: Wang Z, Cui B, Gorovsky MA (2009) Histone H2B ubiquitylation is not required for histone H3 methylation at lysine 4 in tetrahymena. The Journal of biological chemistry 284(50):34870-9
Sequences
>TTHERM_00790530(coding)
ATGGAAAAGACTACAAAAGACGCTTTATCTTAGATTCCTAACAGTTAGACTAATAGTAGT
ACCACAGCAATAGGTGGTAATTCCGCTTCAAATGCAAATAATACAAACGCTGTTAGCAAA
TAGAGAGCATAGACTAATGCAGCTGCATTGCAAGATTTATAAAAGATAACAAAACAAAGA
GTGGAGAACTTTTTAAAGAATTTTGAAAATATCTATGCAGATGTTGCAATTGATTGTGCG
ACTTACGGTTAGAGGATGAATGATGCTGTGAAAAGTTTAGCTCAAAACAACGATGCAAAC
GAAACTATGCGTAGACTCTACAGAGAAAATAGCTAGCTGCAAACTAAGATAAAGGAATAG
GAATCTTACCTTTCTAAATCAGTACCCTTGGCAGATACAGAAAAGGATTTTATTATGAAC
TATTTTGGGAATCAAAGCAAGCAATACGAAGAGCTTCTTTAAAAGTACAATGAAGAAAGA
GAAATATCAGAGCGACTTTCACTTAGAATTCGTCAAAAAATGGACTACTGTGTCACATCA
ATTACAGCCAAAGTAGGACAAGATCCGAATCAGATTTTACAAAAAATAATTTAAAATAAT
GCAAATTCTGTTCTAGGTATTAATACGAATAATGCTGCTTCTATGAGTGGCAAAGAGAAT
CAAAATTAACCTAATTTGCTGTCAAGTCAGTCAAGCTAGAATCTCATTGTTTAATAACAG
CAGAATTAAATGGAAATTGAGGATCAGACTTCAAACGCTAATAATAATAATTCTTAGCAG
GAAAATAGATAAGAAGAGAAGGAAGGATATGAATGTATTTGTGGAGGCTATTAAACTGAA
TACTTTAGTTAAAAATATGAAGAAACCTTAAAGTAATTATTGGATACTCAATAAAAGCTA
ATAGCAACTTAAACAATAATCAATACATCTCCTTCATCTGTCATATCAACAGCTTTTACC
TAGCCAGTTGTTGTTCAAAACAGTTAAAATGGGAACAGCATGAGCACAAGCACAGTTAAT
GGGCTATAAACTACTTAGAGTTTGTAATAGCAGCAGCAATAATAATAAGAGCAGTCAACT
GGAAATTAAAATGGGTAATCAAATCAATAAACCAATGCAAGTGTGGATGCTGTAGCTAAC
AGTGATGGGAATAAGAATAATTGCTAAAACTTAGAATTAAATGGATCTGCAAGTGTTGGA
AGCAGCATACCTTGTTTGAAGAAATCGGAATCAATACAAATATAACAATAGCTGCTTTCT
CAACCTGCCTTGCTTACTTAAGTCAGCACTAATATCTAAGATGAGTTGTGTGATGGCAAG
TTGAGATTACCTATAACAGAGAAGCTGTAAATCTTATAGAAGCGTAATGAACAGCTAGTT
TAAGAGAAATCTGAATTAGAAAAGTATATGAGAGAAAGAGAAATCGACTTAAAAAACATG
GAAGATAAGTTCTTTAGATCAGGTGCTTACTAGTCACTTGCAACTCAGACAGAGGAGTTA
CTAAAGATTACAATTTAAATGAGAAGCTAACTGAAAGAAGCAAAATAATAGATAAGTGAC
ATCGAAAAACAACGTTTCAGAGAAATGTAGGAAGTGCTTACAAAATTCAAGGATGAAAAG
GAGACACTTTTGAAATAACTACACGAAGCTAGAGAGGGTGTTTACAAAACTTAGTTAGGA
GATGCTATGAGAGAGAATCTAACTTAGCACTTTAACTATAAAAAGTACACCTAGCCTTTG
GAAGATTAATTAGAGAAGGCAAGTGAAATTCTTACAATTGAAAGAGAACACAATAGAGAT
TTAGAGTAAAAAAAATAACAGCTAAATGAATAAATAATTCAATTATAAAAGCAGAATAGC
GATTTGCAAGCAAAGCTAAATGAAAAAGAACAACAAATAAATTACCTGCAAAGCCAAATG
GGCTTCACTGGCGAGAGCTATGTTGAAGATAAAATTTTTAAATATTAGAACCATAAAGAT
ACTTTAAAGCTTTTGGAAAAAGTAATGAACGATATGTGCAGTGCTGGTTAAATCAATTAA
GAATAAATTAAAAAATTCAGAGACCTTATCGAATATATAAGAAACAGAGAAGAGAAAATT
GTTTAACTGCAAAAGGTAAAGTAACAAAATGATATAGAAAAGAAAAAGTTATAATAAAAT
TAAGATGAAATATGGAAAGAATATGAAAATCTAGATAAGTCTTTTAGCTAGATGAAAGCA
AGATGTGATCAAGTTAACCAAGAATTAAAGTTAATTTAGGAAAGAGAACAAGGACTGGAA
TATAAAAATCTCGAAATCTAAATGCAGTTCTAAAAGGAAAAGCAGTCTTACTCAATCTTG
GTGGCAGCTGATCAGCAAAAAAAGGATAATACTAAAAACTTAATCGATAATCTTGAAGAT
TAAAACAAATAATTATTGTAATAAAACAGTAATCTATCATCAACTATTGAAGAAGTCAAC
TAGCAAAAGCAGCTTATCCAATAACAACTCGAAGAAAATACAGTGCTGTTGCTCGATACA
TAATAAAAGTTTGATCTTCTAAATAAAAAGTTTGGTGATATTAACGAAAAATATAACGAA
CTTATAGCAAACCATGAAAAAATCCAATAAAAATTGCAAACTGCTTACGAAGTCTTAGAC
AACAGCGAGTCTAAAAACACTTCTGCAGAAGTAGCACAACTAAAAGAAAAAATATAAAAT
ATGCGTCTATTGCTCTAATGCAGTTGCGGATAAAACTTCAAAGACACTATCTTATAAAAA
TGCTTGCATCCCTTTTGCAGAGAGTGCATTGATAAATAAATACGTCTTCGTTAGAGAACT
TGCCCAAAGTGCCGTACAGCCTTTGGTCAAAACGACGTTAAAACGTTATATCTAAGTCAT
TGA>TTHERM_00790530(protein)
MEKTTKDALSQIPNSQTNSSTTAIGGNSASNANNTNAVSKQRAQTNAAALQDLQKITKQR
VENFLKNFENIYADVAIDCATYGQRMNDAVKSLAQNNDANETMRRLYRENSQLQTKIKEQ
ESYLSKSVPLADTEKDFIMNYFGNQSKQYEELLQKYNEEREISERLSLRIRQKMDYCVTS
ITAKVGQDPNQILQKIIQNNANSVLGINTNNAASMSGKENQNQPNLLSSQSSQNLIVQQQ
QNQMEIEDQTSNANNNNSQQENRQEEKEGYECICGGYQTEYFSQKYEETLKQLLDTQQKL
IATQTIINTSPSSVISTAFTQPVVVQNSQNGNSMSTSTVNGLQTTQSLQQQQQQQQEQST
GNQNGQSNQQTNASVDAVANSDGNKNNCQNLELNGSASVGSSIPCLKKSESIQIQQQLLS
QPALLTQVSTNIQDELCDGKLRLPITEKLQILQKRNEQLVQEKSELEKYMREREIDLKNM
EDKFFRSGAYQSLATQTEELLKITIQMRSQLKEAKQQISDIEKQRFREMQEVLTKFKDEK
ETLLKQLHEAREGVYKTQLGDAMRENLTQHFNYKKYTQPLEDQLEKASEILTIEREHNRD
LEQKKQQLNEQIIQLQKQNSDLQAKLNEKEQQINYLQSQMGFTGESYVEDKIFKYQNHKD
TLKLLEKVMNDMCSAGQINQEQIKKFRDLIEYIRNREEKIVQLQKVKQQNDIEKKKLQQN
QDEIWKEYENLDKSFSQMKARCDQVNQELKLIQEREQGLEYKNLEIQMQFQKEKQSYSIL
VAADQQKKDNTKNLIDNLEDQNKQLLQQNSNLSSTIEEVNQQKQLIQQQLEENTVLLLDT
QQKFDLLNKKFGDINEKYNELIANHEKIQQKLQTAYEVLDNSESKNTSAEVAQLKEKIQN
MRLLLQCSCGQNFKDTILQKCLHPFCRECIDKQIRLRQRTCPKCRTAFGQNDVKTLYLSH>TTHERM_00790530(gene)
ATGGAAAAGACTACAAAAGACGCTTTATCTTAGATTCCTAACAGTTAGACTAATAGTAGT
ACCACAGCAATAGGTGGTAATTCCGCTTCAAATGCAAATAATACAAACGCTGTTAGCAAA
TAGAGAGCATAGACTAATGCAGCTGCATTGCAAGATTTATAAAAGATAACAAAACAAAGA
GTGGAGAACTTTTTAAAGAATTTTGAAAATATCTATGCAGATGTTGCAATTGATTGTGCG
ACTTACGGTTAGAGGATGAATGATGCTGTGAAAAGTTTAGCTCAAAACAACGATGCAAAC
GAAACTATGCGTAGACTCTACAGAGAAAATAGCTAGCTGCAAACTAAGATAAAGGAATAG
GAATCTTACCTTTCTAAATCAGTACCCTTGGCAGATACAGAAAAGGATTTTATTATGAAC
TATTTTGGGAATCAAAGCAAGCAATACGAAGAGCTTCTTTAAAAGTACAATGAAGAAAGA
GAAATATCAGAGCGACTTTCACTTAGAATTCGTCAAAAAATGGACTACTGTGTCACATCA
ATTACAGCCAAAGTAGGACAAGATCCGAATCAGATTTTACAAAAAATAATTTAAAATAAT
GCAAATTCTGTTCTAGGTATTAATACGAATAATGCTGCTTCTATGAGTGGCAAAGAGAAT
CAAAATTAACCTAATTTGCTGTCAAGTCAGTCAAGCTAGAATCTCATTGTTTAATAACAG
CAGAATTAAATGGAAATTGAGGATCAGACTTCAAACGCTAATAATAATAATTCTTAGCAG
GAAAATAGATAAGAAGAGAAGGAAGGATATGAATGTATTTGTGGAGGCTATTAAACTGAA
TACTTTAGTTAAAAATATGAAGAAACCTTAAAGTAATTATTGGATACTCAATAAAAGCTA
ATAGCAACTTAAACAATAATCAATACATCTCCTTCATCTGTCATATCAACAGCTTTTACC
TAGCCAGTTGTTGTTCAAAACAGTTAAAATGGGAACAGCATGAGCACAAGCACAGTTAAT
GGGCTATAAACTACTTAGAGTTTGTAATAGCAGCAGCAATAATAATAAGAGCAGTCAACT
GGAAATTAAAATGGGTAATCAAATCAATAAACCAATGCAAGTGTGGATGCTGTAGCTAAC
AGTGATGGGAATAAGAATAATTGCTAAAACTTAGAATTAAATGGATCTGCAAGTGTTGGA
AGCAGCATACCTTGTTTGAAGAAATCGGAATCAATACAAATATAACAATAGCTGCTTTCT
CAACCTGCCTTGCTTACTTAAGTCAGCACTAATATCTAAGATGAGTTGTGTGATGGCAAG
TTGAGATTACCTATAACAGAGAAGCTGTAAATCTTATAGAAGCGTAATGAACAGCTAGTT
TAAGAGAAATCTGAATTAGAAAAGTATATGAGAGAAAGAGAAATCGACTTAAAAAACATG
GAAGATAAGTTCTTTAGATCAGGTGCTTACTAGTCACTTGCAACTCAGACAGAGGAGTTA
CTAAAGATTACAATTTAAATGAGAAGCTAACTGAAAGAAGCAAAATAATAGATAAGTGAC
ATCGAAAAACAACGTTTCAGAGAAATGTAGGAAGTGCTTACAAAATTCAAGGATGAAAAG
GAGACACTTTTGAAATAACTACACGAAGCTAGAGAGGGTGTTTACAAAACTTAGTTAGGA
GATGCTATGAGAGAGAATCTAACTTAGCACTTTAACTATAAAAAGTACACCTAGCCTTTG
GAAGATTAATTAGAGAAGGCAAGTGAAATTCTTACAATTGAAAGAGAACACAATAGAGAT
TTAGAGTAAAAAAAATAACAGCTAAATGAATAAATAATTCAATTATAAAAGCAGAATAGC
GATTTGCAAGCAAAGCTAAATGAAAAAGAACAACAAATAAATTACCTGCAAAGCCAAATG
GGCTTCACTGGCGAGAGCTATGTTGAAGATAAAATTTTTAAATATTAGAACCATAAAGAT
ACTTTAAAGCTTTTGGAAAAAGTAATGAACGATATGTGCAGTGCTGGTTAAATCAATTAA
GAATAAATTAAAAAATTCAGAGACCTTATCGAATATATAAGAAACAGAGAAGAGAAAATT
GTTTAACTGCAAAAGGTAAAGTAACAAAATGATATAGAAAAGAAAAAGTTATAATAAAAT
TAAGATGAAATATGGAAAGAATATGAAAATCTAGATAAGTCTTTTAGCTAGATGAAAGCA
AGATGTGATCAAGTTAACCAAGAATTAAAGTTAATTTAGGAAAGAGAACAAGGACTGGAA
TATAAAAATCTCGAAATCTAAATGCAGTTCTAAAAGGAAAAGCAGTCTTACTCAATCTTG
GTGGCAGCTGATCAGCAAAAAAAGGATAATACTAAAAACTTAATCGATAATCTTGAAGAT
TAAAACAAATAATTATTGTAATAAAACAGTAATCTATCATCAACTATTGAAGAAGTCAAC
TAGCAAAAGCAGCTTATCCAATAACAACTCGAAGAAAATACAGTGCTGTTGCTCGATACA
TAATAAAAGTTTGATCTTCTAAATAAAAAGTTTGGTGATATTAACGAAAAATATAACGAA
CTTATAGCAAACCATGAAAAAATCCAATAAAAATTGCAAACTGCTTACGAAGTCTTAGAC
AACAGCGAGTCTAAAAACACTTCTGCAGAAGTAGCACAACTAAAAGAAAAAATATAAAAT
ATGCGTCTATTGCTCTAATGCAGTTGCGGATAAAACTTCAAAGACACTATCTTATAAAAA
TGCTTGCATCCCTTTTGCAGAGAGTGCATTGATAAATAAATACGTCTTCGTTAGAGAACT
TGCCCAAAGTGCCGTACAGCCTTTGGTCAAAACGACGTTAAAACGTTATATCTAAGTCAT
TGA