Identifiers and Description

Gene Model Identifier

TTHERM_01020700

Standard Name

ABC1 (ABC family protein 1)

Aliases

PreTt17637 | 200.m00050 | 3756.m00246

Description

ABC1 ABC1 family protein; ABC1 family protein kinase; fusion of aarF domain containing protein and ubiquinone biosynthesis protein

Genome Browser (Macronucleus)

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Genome Browser (Micronucleus)

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Gene Ontology Annotations

No Data fetched for Gene Ontology Annotations

Domains

No Data fetched for Domains

Gene Expression Profile

  • Tetrahymena Functional Genomics Database:

Change in Gene Expression

TMHMM

TMHMM

Signal Peptide

Signal Peptide Present?: No
Presense Probability: 21.8%

TetraMine Data

TTHERM_01020700

WebApollo

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Tetrahymena Stock Center

No Data fetched for StockID

Homologs (v.2006 protein sequences)

SourceIdentifierScoreDescription
Tetrahymena borealisEI9_19285.19.997093137033517e-262ABC1 family protein (763 aa)
OxytrichaContig21891.0.g83.999369102302453e-125ABC1 family
WormBaseWBGene000084106.001309080488961e-82status:Confirmed UniProt:O17
735 protein_id:CAB02876.1
DictyBaseDDB_G02848979.996907204735647e-62abkD on chromosome: 4 position
2611033 to 2613269
SGDYLR253W7.999270105144775e-57YLR253W Putative protein of un
known function; the authentic,
non-tagged protein is detecte
d in highly purified mitochond
ria in high-throughput studies
; transcription is periodic du
ring the metabolic cycle; YLR2
53W is not an essential gene
Stentor CoeruleusSteCoe_76777.781132241133797e-20

General Information

No Data fetched for General Information

Associated Literature

  1. Ref:16933976: Eisen JA, Coyne RS, Wu M, Wu D, Thiagarajan M, Wortman JR, Badger JH, Ren Q, Amedeo P, Jones KM, Tallon LJ, Delcher AL, Salzberg SL, Silva JC, Haas BJ, Majoros WH, Farzad M, Carlton JM, Smith RK, Garg J, Pearlman RE, Karrer KM, Sun L, Manning G, Elde NC, Turkewitz AP, Asai DJ, Wilkes DE, Wang Y, Cai H, Collins K, Stewart BA, Lee SR, Wilamowska K, Weinberg Z, Ruzzo WL, Wloga D, Gaertig J, Frankel J, Tsao CC, Gorovsky MA, Keeling PJ, Waller RF, Patron NJ, Cherry JM, Stover NA,

Sequences

>TTHERM_01020700(coding)
ATGAATTTTATTAGGAGAAATAAGTTTAAAATTTTAGGTACTGCACTAATCTCTCCTTTC
GCATTAGTTTATGGTGCAGGCTTTTATTATTTTCCAGAATTAAGACATAATTAAAGTTAA
ATGATTAAAGCTTTAATACGTACAGGTAGAGTAGCTATAGCAGGAGCAAGAATGGCAAAT
ATATATATGAAAGATGATAATCGAAGCATCGAGACAAAACACAATGAAGCCTCATTGATT
TTAAAAGATGCTTTTGTAAAAAATGCTGGACTATACTTAAAATTTGCATAATTACTATCA
TCACTCGATGTTGTTGTACCAGAAGAATATAGAAGAAATTTTGAACCATTGTGTCATGAG
TGTCCAGAAAATAGTTTTTAAAATGTAAAACATTCAATAGAAAGCTCATTAAGAAAACCA
ATAGATGAGGTATTTTCAGAGTTTAATCCAAAGCCACTAAAATCGGCATCTATTGCTTAA
GTTCATGAGGCCGTTTTAAAAGAAACAGGTGAGAGAGTTGCTGTTAAGGTGATGCATGAC
TGGTTGTAAGAATCTAGTAAAGGAGATTTAAAAGTAATAGGTCTATTTGTTGATATAGGA
GAATTATTATTTCCAGAATTTAAATTCAAGTGGTTTTCAGAAGAATTAAATTAAATTCTA
CCTCAAGAATTAAACTTCTTGGATGAAGTTAAAAACAGTGAGAGAGCCAGATAAATATTG
AAAGATAAACCTAACATTTATGTTCCTATAAACCACTTTGGCCTTTGCAATAGTAAAATA
ATTACTATGGAATTTATTGATGGATTCCCAATTATGGATGTGCCAACTCTGAAGAGAGAA
AAATTTGACATGAAAAAAATTGCCTATACAATAAGTGATACATTTTCTTAAATGATATTT
TAAAATGGATTTGTTCATAGCGATCCTCATTAAGGAAATCTTTTATTAAGGAAAGTAAAA
GATCCTAAAAACCCTCACAAAACCATAGACCAAGTTGTTCTTTTGGATCATGGGTTATAT
AAAAATCTATCTCCATAGTTTAGATTGAGTTATAGCAAACTTTGGAAAGGTATAATAACT
CAAAACGAAGAACTTATCTAAAAGTCTTCAATCGAGTTAGGTGTTAAAGAAGATTAATAC
CCTCTCTTTGCCTCTATGATTACTAGCAGAACATACGAAGATTTGATGGATGATAAAAAA
TCTGTAAAAGAGCGTTTAAGAAGTCCTTAAAACTAAGAAGAAAGAGATAAAATAGCAATA
AATGCAGCCAAATACCATAGATAGATTATTTAAATATTACACCAAATGAACAGATCTCTG
CTACTCTTATTAAAAACAACTGATTTCTTAAGGACTATAGACAACAAATTAGGAAGCCCA
GTAAATACCTTTGAAATAACACTTGACTATTGCTTTAATGAAATAGAAAAATTCGAATTC
AATAATTCTTTTTGGCTATTTTTACTCTTTAGATTTGAAAAAATAATGGCTAAGATTAAA
TTATTTATTTATAAATAATTATTACCTTAACCTTAATTAAATTGA


>TTHERM_01020700(protein)
MNFIRRNKFKILGTALISPFALVYGAGFYYFPELRHNQSQMIKALIRTGRVAIAGARMAN
IYMKDDNRSIETKHNEASLILKDAFVKNAGLYLKFAQLLSSLDVVVPEEYRRNFEPLCHE
CPENSFQNVKHSIESSLRKPIDEVFSEFNPKPLKSASIAQVHEAVLKETGERVAVKVMHD
WLQESSKGDLKVIGLFVDIGELLFPEFKFKWFSEELNQILPQELNFLDEVKNSERARQIL
KDKPNIYVPINHFGLCNSKIITMEFIDGFPIMDVPTLKREKFDMKKIAYTISDTFSQMIF
QNGFVHSDPHQGNLLLRKVKDPKNPHKTIDQVVLLDHGLYKNLSPQFRLSYSKLWKGIIT
QNEELIQKSSIELGVKEDQYPLFASMITSRTYEDLMDDKKSVKERLRSPQNQEERDKIAI
NAAKYHRQIIQILHQMNRSLLLLLKTTDFLRTIDNKLGSPVNTFEITLDYCFNEIEKFEF
NNSFWLFLLFRFEKIMAKIKLFIYKQLLPQPQLN


>TTHERM_01020700(gene)
ATGAATTTTATTAGGAGAAATAAGTTTAAAATTTTAGGTACTGCACTAATCTCTCCTTTC
GCATTAGTTTATGGTGCAGGCTTTTATTATTTTCCAGAATTAAGACATAATTAAAGTTAA
ATGATTAAAGCTTTAATACGTACAGGTAGAGTAGCTATAGCAGGAGCAAGAATGGCAAAT
ATATATATGAAAGTATGAATATCATCAAAATATTAAGTTAAAATAATTTTATTTATTTGC
TAGGATGATAATCGAAGCATCGAGACAAAACACAATGAAGCCTCATTGATTTTAAAAGAT
GCTTTTGTAAAAAATGCTGGACTATACTTAAAATTTGCATAATTACTATCATCAGTAATT
TTATCTTTTGCAAGAGAGATATGATAAAATATTTTTTTTCCATTTAATTATTTATAATTA
AAAAGCTCGATGTTGTTGTACCAGAAGAATATAGAAGAAATTTTGAACCATTGTGTCATG
AGTGTCCAGAAAATAGTTTTTAAAATGTAAAACATTCAATAGAAAGCTCATTAAGAAAAC
CAATAGATGAGGTATTTTCAGGTAAAAGCTAAAAATATATCGAATAGAAATATTCAATGT
TATTTTATTTATAGAGTTTAATCCAAAGCCACTAAAATCGGCATCTATTGCTTAAGTTCA
TGAGGCCGTTTTAAAAGAAACAGGTGAGAGAGTTGCTGTTAAGGTGATGCATGACTGGTT
GTAAGAATCTAGTAAAGGAGATTTAAAAGTAATAGGTCTATTTGTTGATATAGGAGAATT
ATTATTTCCAGAATTTAAATTCAAGTGGTTTTCAGAAGAATTAAGTATTTTTATTATATA
AATAAAACATTTCTTTATATTTCAAATGAAAAGCTGGACATTTCTTTCTTATAATTATCC
AATTGGTATATTGTAAATTCTAGTTAAACTGATTAATATTTTAATTAAAATAGATTAAAT
TCTACCTCAAGAATTAAACTTCTTGGATGAAGTTAAAAACAGTGAGAGAGCCAGATAAAT
ATTGAAAGATAAACCTAACATTTATGTTCCTATAAACCACTTTGGCCTTTGCAATAGTAA
AATAATTACTATGGAATTTATTGATGGATTCCCAATTATGGATGTGCCAACTCTGAAGAG
AGAAAAATTTGACATGAAAAAAATTGCCTATACAATAAGTGATACATTTTCTTAAATGAT
ATTTTAAAATGGATTTGTTCATAGCGATCCTCATTAAGGAAATCTTTTATTAAGGAAAGT
AAAAGATCCTAAAAACCCTCACAAAACCATAGACCAAGTTGTTCTTTTGGATCATGGGTT
ATATAAAAATCTATCTCCATAGTTTAGATTGAGTTATAGCAAACTTTGGAAAGGTATAAT
AACTCAAAACGAAGAACTTATCTAAAAGTCTTCAATCGAGTTAGGTGTTAAAGAAGATTA
ATACCCTCTCTTTGCCTCTATGATTACTAGCAGAACATACGAAGATTTGATGGATGATAA
AAAATCTGTAAAAGAGCGTTTAAGAAGTCCTTAAAACTAAGAAGAAAGAGATAAAATAGC
AATAAATGCAGCCAAATACCATAGATAGATTATTTAAATATTACACCAAATGAACAGGTA
AAGTTGAATCTATAAACAAGTTAAAAATAATTTTTATTTAAAAAGATCTCTGCTACTCTT
ATTAAAAACAACTGATTTCTTAAGGACTATAGACAACAAATTAGGAAGCCCAGTAAATAC
CTTTGAAATAACAGTAATTTATTGATTTTTAATCATAATAATTTAAAATAAAACATTTTT
ATGAATAACAGCTTGACTATTGCTTTAATGAAATAGAAAAATTCGAATTCAATAATTCTT
TTTGGCTATTTTTACTCTTTAGATTTGAAAAAATAATGGCTAAGATTAAATTATTTATTT
ATAAATAATTATTACCTTAACCTTAATTAAATTGA