Gene Model Identifier
TTHERM_00420400
Standard Name
AAP8
Aliases
PreTt07165 | 46.m00220 | 3679.m00070 | A2A8
Description
Member of the SAGA complex.
Genome Browser (Macronucleus)
Genome Browser (Micronucleus)
No Data fetched for Gene Ontology Annotations
( PF02170 ) PAZ domain
( PF08621 ) RPAP1-like, N-terminal
( TIGR02846 ) RNA polymerase sigma-K factor
( PF04508 ) Viral A-type inclusion protein repeat
Tetrahymena Functional Genomics Database:
Signal Peptide Present?: No
TTHERM_00420400
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No Data fetched for StockID
(v.2006 protein sequences)
Source Identifier Score Description
Tetrahymena borealis EI9_11032.1 9.997093137033517e-262 hypothetical protein (2320 aa)
Oxytricha Contig442.1.g2 7.998167219297731e-26 Zinc-finger domain of monoamin
Paragraph No Gene Name Paragraph Text 127 AAP8 ,COI14 Former TTHERM_00420400 contained TTHERM_00420400, TTHERM_000420399, and TTHERM_000420398. Woehrer et al (2015) called the former TTHERM_00420400 as COI14. The primers used for their gene expression analysis by RT-PCR are complementary to TTHERM_000420399. Therefore, TTHERM_000420399 takes over the name COI14. According to Saettone et al. (2018), the new TTHERM_00420400 is similar to Ada2-associated protein and thus now called AAP8.
Ref:29523178 : Saettone A, Garg J, Lambert JP, Nabeel-Shah S, Ponce M, Burtch A, Thuppu Mudalige C, Gingras AC, Pearlman RE, Fillingham J (2018) The bromodomain-containing protein Ibd1 links multiple chromatin-related protein complexes to highly expressed genes in Tetrahymena thermophila. Epigenetics & chromatin 11(1):10Ref:26688337 : Kataoka K, Mochizuki K (2015) Phosphorylation of an HP1-like Protein Regulates Heterochromatin Body Assembly for DNA Elimination. Developmental cell 35(6):775-88Ref:25588944 : Woehrer SL, Aronica L, Suhren JH, Busch CJ, Noto T, Mochizuki K (2015) A Tetrahymena Hsp90 co-chaperone promotes siRNA loading by ATP-dependent and ATP-independent mechanisms. The EMBO journal 34(4):559-77
>TTHERM_00420400(coding)ATG GGT CGT TTA AAG CAG AAA TTA CTA GAA AAA AGA TTG CTC CAA TAG TAA TAA AAA AAA AAG AAT CAT ATT AAA AAA GAG AAA GGA GAA ATT ACA AAA TTA CAA AAT GTG AAG GAA ACA AAT GCA GAA TAA TAG AAA AAA AAG GAT CAA AAA GGA AAG GAT GAT GAT GAT TCT CGT AAT GCA CTC GAA AAA ATA ATT AAA CTT GAT AAA AAA AAT AGT AAC TTT GAT TTA TAT GAT CCA CTT ACA AAC AAT TTT CTG AAA GTT CGA AGT GTT AAT TAC TAG ATA AAT TAT TAG TAA ATA CAA GGA TTG TCT TAA ACA GAT CAT TAA ATG AGA TAA TTT TGG AGA CAT GTC AAT AGC ACA TAT TTA AGG AGA GTG CAA AGT TAG GAT GAA AAT AAG CTT GAG TAT TTA AAA AAT TTA TTC AAT ACT CCT ATT GAG CCT GAC AAT TAG GAG TTA GAA TGG GAC GAT TGG AGA GCT TAG CTA GCT GTT TAA TAT ATC TTA GAT GAA TCT GTC CAA AGG TAG TAT TAA GAT GAT GAC TTA TCT AAT CTA AAC TAT GAA AAT CTG CTA CTT CAT ATG AGA ATT ACT TTT CTT ATT GCT AAT CAA TAT ATT AAG GAT AAA TCT CTC ATA TAA AAA ATA TTG CAA ACC AAA AAG AAA TAA ATT CCT AAA AAT TCA TCT AGT TAT TAA AGC TAA CTT GAA GCA TTT CAA AAT GAA AAA AAC TAA TTG CTA TAG ATT ATC TAG AAT ATT GCT TAA AAC TCA TAA TTA TAC AAA GAA ATA CAA GAA GAA GAA GAT CAA CTG TTG GAG GAA ACT GTA AAA TTA AAA GAA GAA TTA AAA TAA ATA AAT CAA CAA AAT CAT AAG AAT ATT TAA AGA TTA GAG CAG CAA CTT AAA ATG GAA TTT TGT AAG TAG CAA ATG ATA TAT TTG GAA ACA GAT TAT ATT CTT TCA AAG TCT AAA AAT GAA AAT ATT CAC ATA CAA AAA GAT TAT AAT GAG GAA CAA AAG CAC CTT TTG CTT GAG AAA CAC TTT GCT AAA ATG GAG AAT ATG AAT TTG TAG GCT TCA TTT TTA CAT TAA ACT ATT TTA AGA TTG GAG AAG AAA TAG CTT TCG GAA ACT ATT TCA TGC ATT ACT GGA TAC ACA AAC AAA TAC AAT TAG CCA TAA TTT GAA TTA AGG TTT GAG TCA GCT TAT AAT GAT TCA GCA GAA TGG ATA AGT GAG TAG TTA TTA GAT GAG TTG AAC TCT TTA AGA GAT TAA AAT TTA TTT TCT TTT TAT AAC ATT CCT TAA AAA ACG CTG TAT TCT CAT ATA GCA AAC AAC TTT TTA GGA TGG AAT TAT ATA TAA AAA AAC AGA GAT AAG CCA AAC TAA TTG AAG CTA AAA AAT ATT AAG GAT TTG ATA ACT TAA AAA GAA TAA CCT GGA AAT AAA ATG AAT TAG TAT GAA ATA TGT CAT CAC TGT AAA CAT TTG TTT AAA AAG AGT ATT CTT TTT TAA TGC AAG TAT AAA GCA TCT ACT ATG GGA ATA CCT GTC CAT AAT TAT ATT GTT ACT GAT CCC TTC TTA TTT TAA TTT ATT GAA TCT GAC AAT ACA AAC AGT AAG AAG CCT CAA GTC AAC AAA AAA AGA AAC TGC TAT ACT ATG TTC TAA AAA GTA GAT GGA GAT TTG GTT TGC AAA AGA ATG TAC TGT AGA TCT TGT CTA AAA TAA AAT TAC GAT TTA ATT CTT TCA GAA ATT AAA GAT AAG TAA GAT TGG CTT TGC CCT TTC TGC TAA GGA AAT TGT TAT TGT ACT AGA TGT CTT CGA AAT GAA TTA CTC ATG AAA TAC AAA GGA ATT TAT ATT TTA TTA GGA GGA GAT ATT AAT TTA ATT CAA AGA GAA TCT GTG TTT GAA TAT TAT TCT CAG CAG ATG TCC TAG CAA AGA TAA AGA GAA TAT TAA GAG TAG CAA TTA AAC ATG AAT AGC AGA GGT ATA AAA AAT TCA GTA AAA GGA TTA AAA TTA AAA GAT GAA CAC ACA TAA AAA ATA GTT GAA GTT GAG AGA TTA AAG TAA TTA TGT CAA TAA GTG AAT AAA AGA GAA AAA TAT AAA TTT GAA ATG CTG AAA TAG AAT ATA GAT ATA TTT AGA GAA AAG TAT AAA ACT CAC ACT GAT AAA GAA TTC CCC ATA GTT GAC ATA AAT AAT TTG AAT ACA CAA GAA TTT ATT GCA GAC TTA TTA CCT TTC CAA AAT GAA CTA GTT ATA AAT ACA ATA AAT AAC TTT CAA AAA AAC AAC TAA ATA ATA GGC AAA AAC TTA ACA AAA AAT AGC AGT AAT AAA ATA AAA ATG ATT CAA ATT AAC AAA CTT TTC AAA AAG AAA AAT AAA AAA TAA AAA AAT GAT GAT GAT GAT GAA GAA AAT AAT ATT CAA TAG GAA AAT TCA GTT AAG AGT TAC ACT TCT TAA AAC TCT TCA TCA AAT TCA TAA TCT TAG TCA CAA TCA TCC ATA AAT TCA AAA GGA GAT GAA AGA ATA GCT AGT GGT GTG TAA AGA AAG AAA GCT TAA TCA TTA AAA ATA AAT AAG TTA ATT AAA AAA ACA AAA ACA AGT AGT AAA GTC ATG CTT AAA AAG AGC AAT AAG AAG GGT AAT TAG AGG GAC TGA >TTHERM_00420400(protein)M G R L K Q K L L E K R L L Q Q Q Q K K K N H I K K E K G E I T K L Q N V K E T N A E Q Q K K K D Q K G K D D D D S R N A L E K I I K L D K K N S N F D L Y D P L T N N F L K V R S V N Y Q I N Y Q Q I Q G L S Q T D H Q M R Q F W R H V N S T Y L R R V Q S Q D E N K L E Y L K N L F N T P I E P D N Q E L E W D D W R A Q L A V Q Y I L D E S V Q R Q Y Q D D D L S N L N Y E N L L L H M R I T F L I A N Q Y I K D K S L I Q K I L Q T K K K Q I P K N S S S Y Q S Q L E A F Q N E K N Q L L Q I I Q N I A Q N S Q L Y K E I Q E E E D Q L L E E T V K L K E E L K Q I N Q Q N H K N I Q R L E Q Q L K M E F C K Q Q M I Y L E T D Y I L S K S K N E N I H I Q K D Y N E E Q K H L L L E K H F A K M E N M N L Q A S F L H Q T I L R L E K K Q L S E T I S C I T G Y T N K Y N Q P Q F E L R F E S A Y N D S A E W I S E Q L L D E L N S L R D Q N L F S F Y N I P Q K T L Y S H I A N N F L G W N Y I Q K N R D K P N Q L K L K N I K D L I T Q K E Q P G N K M N Q Y E I C H H C K H L F K K S I L F Q C K Y K A S T M G I P V H N Y I V T D P F L F Q F I E S D N T N S K K P Q V N K K R N C Y T M F Q K V D G D L V C K R M Y C R S C L K Q N Y D L I L S E I K D K Q D W L C P F C Q G N C Y C T R C L R N E L L M K Y K G I Y I L L G G D I N L I Q R E S V F E Y Y S Q Q M S Q Q R Q R E Y Q E Q Q L N M N S R G I K N S V K G L K L K D E H T Q K I V E V E R L K Q L C Q Q V N K R E K Y K F E M L K Q N I D I F R E K Y K T H T D K E F P I V D I N N L N T Q E F I A D L L P F Q N E L V I N T I N N F Q K N N Q I I G K N L T K N S S N K I K M I Q I N K L F K K K N K K Q K N D D D D E E N N I Q Q E N S V K S Y T S Q N S S S N S Q S Q S Q S S I N S K G D E R I A S G V Q R K K A Q S L K I N K L I K K T K T S S K V M L K K S N K K G N Q R D >TTHERM_00420400(gene)ATG GGT CGT TTA AAG CAG AAA TTA CTA GAA AAA AGA TTG CTC CAA TAG TAA TAA AAA AAA AAG AAT CAT ATT AAA AAA GAG AAA GGA GAA ATT ACA AAA TTA CAA AAT GTG AAG GAA ACA AAT GCA GAA TAA TAG AAA AAA AAG GAT CAA AAA GGA AAG GAT GAT GAT GAT TCT CGT AAT GCA CTC GAA AAA ATA ATT AAA CTT GAT AAA AAA AAT AGT AAC TTT GAT TTA TAT GAT CCA CTT ACA AAG TAT TAG AGT TTA TTT TAA GCA TTA TTA AGA TAT TAA AAA TCA AAA AAA TGG AAA ATG GGA AAA ATT ATT TTG TTA ACT TTT ATT TTT GGA ATT AAT AGC AAT TTT CTG AAA GTT CGA AGT GTT AAT TAC TAG ATA AAT TAT TAG TAA ATA CAA GGA TTG TCT TAA ACA GAT CAT TAA ATG AGA TAA TTT TGG AGA CAT GTC AAT AGC ACA TAT TTA AGG AGA GTG CAA AGT TAG GAT GAA AAT AAG CTT GAG TAT TTA AAA AAT TTA TTC AAT ACT CCT ATT GAG CGT AAA TAT TTA TTT AAA TAA TAA TAA AAA TTT AAT GTT TCA TTA ATA ATT GCA TAA CAT TAA TGA GCA CTT CTT ATA AAC TAA ATA GGG AAA TTT GCT TTA TCT TTT CTA TTT ATC AAG ATA ACA ACG ATA TAT ATA ATT TTT TAT GAA AAA TCT GAG CTC AAA TAA GAT TAT CCA ATC AAA TTT TAG GAT TTT TAT TTC ATA TAT ATC TAA TTA TTT TTG ATT TAT GAA TTT ATT AGA ATT ATT TTG TTT TAT AAA AAT TAA CAA TTA CAA AAT TTT ATA ATT TTT CAT TTT AAA TTC ATA AAA GCT GAC AAT TAG GAG TTA GAA TGG GAC GAT TGG AGA GCT TAG CTA GCT GTT TAA TAT ATC TTA GAT GAA TCT GTC CAA AGG TAG TAT TAA GAT GAT GAC TTA TCT AAT CTA AAC TAT GAA AAT CTG CTA CTT CAT ATG AGA ATT ACT TTT CTT ATT GCT AAT CAA TAT ATT AAG GAT AAA TCT CTC ATA TAA AAA ATA TTG CAA ACC AAA AAG AAA TAA ATT CCT AAA AAT TCA TCT AGT TAT TAA AGC TAA CTT GAA GCA TTT CAA AAT GAA AAA AAC TAA TTG CTA TAG ATT ATC TAG AAT ATT GCT TAA AAC TCA TAA TTA TAC AAA GAA ATA CAA GAA GAA GAA GAT CAA CTG TTG GAG GAA ACT GTA AAA TTA AAA GAA GAA TTA AAA TAA ATA AAT CAA CAA AAT CAT AAG AAT ATT TAA AGG TAA AAT CAA AAA ATA CAC ATA TCA GAA AAT GGC ATT AAA GTT TTT TAT TTA AAA ATA ATT TAT TCA GAT TAG AGC AGC AAC TTA AAA TGG AAT TTT GTA AGT AGC AAA TGA TAT ATT TGG AAA CAG ATT ATA TTC TTT CAA AGT CTA AAA ATG AAA ATA TTC ACA TAC AAA AAG ATT ATA ATG AGG AAC AAA AGC ACC TTT TGC TTG AGA AAC ACT TTG CTA AAA TGG AGA ATA TGA ATT TGT AGG CTT CAT TTT TAC ATT AAA CTA TTT TAA GAT TGG AGA AGA AAT AGC TTT CGG AAA CTA TTT CAT GCA TTA CTG GAT ACA CAA ACA AAT ACA ATT AGC CAT AAT TTG AAT TAA GGT TTG AGT CAG CTT ATA ATG ATT CAG CAG AAT GGA TAA GTG AGT AGT TAT TAG ATG AGT TGA ACT CTT TAA GAG ATT AAA ATT TAT TTT CTT TTT ATA ACA TTC CTT AAA AAA CGC TGT ATT CTC ATA TAG CAA ACA ACG TAA AAT AGA TAA ATT ATA AAA TAA AAA CAA TAA AAA TAT ATA TAA TTT TAT AAA GTT TTT AGG ATG GAA TTA TAT ATA AAA AAA CAG AGA TAA GCC AAA CTA ATT GAA GCT AAA AAA TAT TAA GGA TTT GAT AAC TTA AAA AGA ATA ACC TGG AAA TAA AAT GAA TTA GTA TGA AAT ATG TCA TCA CTG TAA ACA TTT GTT TAA AAA GAG TAT TCT TTT TTA ATG CAA GTA TAA AGC ATC TAC TAT GGG AAT ACC TGT CCA TAA TTA TAT TGT TAC TGA TCC CTT CTT ATT TTA ATT TAG TAA ACA ATT ATT TTT TTA ATA GCT TTG AAA GAA ATT TTA TTT AAT TTA GTT GAA TCT GAC AAT ACA AAC AGT AAG AAG CCT CAA GTC AAC AAA AAA AGA AAC TGC TAT ACT ATG TTC TAA AAA GTA GAT GGA GAT TTG GTT TGC AAA AGA ATG TAC TGT AGA TCT TGT CTA AAA TAA AAT TAC GAT TTA ATT CTT TCA GAA ATT AAA GAT AAG TAA GAT TGG CTT TGC CCT TTC TGC TAA GTA AAA TTA AAA TAG TAT TTT AAG AAA AGC ATG AAT TAA AAA TAT ATT TCA AAA GGG AAA TTG TTA TTG TAC TAG ATG TCT TCG AAA TGA ATT ACT CAT GAA ATA CAA AGG AAT TTA TAT TTT ATT AGG AGG AGA TAT TAA TTT AAT TCA AAG AGA ATC TGT GTT TGA ATA TTA TTC TCA GCA GAT GTC CTA GCA AAG AGT ATT TTT AAC ATT TTA ATT ATT TTA TTT AAC TTT TTT TTA GTA AAG AGA ATA TTA AGA GTA GCA ATT AAA CAT GAA TAG CAG AGG TAT AAA AAA TTC AGT AAA AGG ATT AAA ATT AAA AGA TGA ACA CAC ATA AAA AAT AGT TGA AGT TGA GAG ATT AAA GTA ATT ATG TCA ATA AGT GAA TAA AAG AGA AAA ATA TAA ATT TGA AAT GCT GAA ATA GAA TAT AGA TAT ATT TAG AGA AAA GTA TAA AAC TCA CAC TGA TAA AGA ATT CCC CAT AGT TGA CAT AAA TAA TTT GAA TAC ACA AGA ATT TAT TGC AGA CTT ATT ACC TTT CCA AAA TGA ACT AGT TAT AAA TAC AAT AAG TAA AAA TAA TTT TAT CTA AAA AAA TAA ATT TAA TCT TTA ATT AAA AAT TAG ATA ACT TTC AAA AAA ACA ACT AAA TAA TAG GCA AAA ACT TAA CAA AAA ATA GCA GTA ATA AAA TAA AAA TGA TTC AAA TTA ACA AAC TTT TCA AAA AGA AAA ATA AAA AAT AAA AAA ATG ATG ATG ATG ATG AAG AAA ATA ATA TTC AAT AGG AAA ATT CAG TTA AGA GTT ACA CTT CTT AAA ACT CTT CAT CAA ATT CAT AAT CTT AGT CAC AAT CAT CCA TAA ATT CAA AAG GAG ATG AAA GAA TAG CTA GTG GTG TGT AAA GAA AGA AAG CTT AAT CAT TAA AAA TAA ATA AGT TAA TTA AAA AAA CAA AAA CAA GTA GTA AAG TCA TGC TTA AAA AGA GCA ATA AGA AGG GTA ATT AGA GGG ACT GA
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